RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ANAPC10Q9UM13 185 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 MALRD1Q5VYJ5 2156 aa3.52□□□□□ -1.85
CCDC39-202ENST00000471307 ITPR2Q14571 2701 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 NAV2Q8IVL1 2488 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 KIR2DS1A0A191URI9 304 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 KBTBD11-OT1A0A1B0GTJ5 212 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 TMEM30CPA0ZSE6 113 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 ZNF736B4DX44 427 aaPredicted RBP3.51□□□□□ -1.85
CCDC39-202ENST00000471307 PLA2G10O15496 165 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 NDUFB3O43676 98 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 IGHV3-23P01764 117 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 CD74P04233 296 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 AKAIN1P0CW23 69 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 KIR2DS4P43632 304 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 GPR6P46095 362 aaPredicted RBP3.51□□□□□ -1.85
CCDC39-202ENST00000471307 ATP5J2P56134 94 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 TAS2R46P59540 309 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 IFITM3Q01628 133 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 AESQ08117 197 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 KIR2DS1Q14954 304 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 GRK1Q15835 563 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 USF2Q15853 346 aaPredicted RBP3.51□□□□□ -1.85
CCDC39-202ENST00000471307 CHRFAM7AQ494W8 412 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 ACTBL2Q562R1 376 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 LRRC10Q5BKY1 277 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 C6orf183Q5T699 404 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 ZNF57Q68EA5 555 aaPredicted RBP3.51□□□□□ -1.85
CCDC39-202ENST00000471307 ZNF880Q6PDB4 577 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 LYPD2Q6UXB3 125 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 LINC01561Q8N1V8 128 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 ZNF565Q8N9K5 539 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 OR4K15Q8NH41 348 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 PLPPR1Q8TBJ4 325 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 MRPL30Q8TCC3 161 aaKnown RBP3.51□□□□□ -1.85
CCDC39-202ENST00000471307 MARCH1Q8TCQ1 289 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 GAFA1Q96PS6 74 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 MFFQ9GZY8 342 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 RANBP3Q9H6Z4 567 aaPredicted RBP3.51□□□□□ -1.85
CCDC39-202ENST00000471307 PATZ1Q9HBE1 687 aaKnown RBP3.51□□□□□ -1.85
CCDC39-202ENST00000471307 ZNF286AQ9HBT8 521 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 ZC4H2Q9NQZ6 224 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 KCNIP1Q9NZI2 227 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 CLN8Q9UBY8 286 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 OPN4Q9UHM6 478 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 ANXA10Q9UJ72 324 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 TRAPPC2LQ9UL33 140 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 FLVCR2Q9UPI3 526 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 DSCAML1Q8TD84 2053 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 ASH1LQ9NR48 2969 aaKnown RBP3.51□□□□□ -1.85
CCDC39-202ENST00000471307 POLQO75417 2590 aa3.51□□□□□ -1.85
CCDC39-202ENST00000471307 UNC79Q9P2D8 2635 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 MED13LQ71F56 2210 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 FBN2P35556 2912 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 MEIKINA0A087WXM9 373 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 TRGV10A0A0A0MS01 117 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 hADV38S2A0JD32 116 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 ODAMA1E959 279 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 MEIS3P1A6NDR6 274 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 CEACAM18A8MTB9 384 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 DISC1C4P0D8 188 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 E9PLD3 99 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 LYRM1O43325 122 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 HSBP1O75506 76 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 LY6HO94772 140 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 RAB3DO95716 219 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 PTTG1O95997 202 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 TFF1P04155 84 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 CD3DP04234 171 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 IFNA6P05013 189 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 CGB3P0DN86 165 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 CGB7P0DN87 165 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 RCC1P18754 421 aaPredicted RBP3.5□□□□□ -1.85
CCDC39-202ENST00000471307 HLA-DMAP28067 261 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 RBMXP38159 391 aaKnown RBP3.5□□□□□ -1.85
CCDC39-202ENST00000471307 LEPP41159 167 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 EDDM3BP56851 147 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 ARPC4P59998 168 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 TSPAN5P62079 268 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 RPL31P62899 125 aaKnown RBP3.5□□□□□ -1.85
CCDC39-202ENST00000471307 OR5I1Q13606 314 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 OXA1LQ15070 435 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 CDK10Q15131 360 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 RGS21Q2M5E4 152 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 DEFB113Q30KQ7 82 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 RNASE10Q5GAN6 216 aaKnown RBP3.5□□□□□ -1.85
CCDC39-202ENST00000471307 VAX1Q5SQQ9 334 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 AVPI1Q5T686 147 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 METTL11BQ5VVY1 283 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 ARRDC1Q8N5I2 433 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 FAM216BQ8N7L0 139 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 TPRX1Q8N7U7 411 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 DUSP18Q8NEJ0 188 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 OR8B3Q8NGG8 313 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 OR9G4Q8NGQ1 327 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 OR5H2Q8NGV7 314 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 C10orf105Q8TEF2 133 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 NRGNQ92686 78 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 GALMQ96C23 342 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 OR8B2Q96RD0 313 aa3.5□□□□□ -1.85
CCDC39-202ENST00000471307 PRRT1Q99946 306 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms