RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 DEFB114Q30KQ6 69 aa9.55□□□□□ -0.88
PPP1R3F-204ENST00000471261 SPSB3Q6PJ21 355 aa9.55□□□□□ -0.88
PPP1R3F-204ENST00000471261 Q6ZRM9 215 aa9.55□□□□□ -0.88
PPP1R3F-204ENST00000471261 UXS1Q8NBZ7 420 aa9.55□□□□□ -0.88
PPP1R3F-204ENST00000471261 ZNF114Q8NC26 417 aa9.55□□□□□ -0.88
PPP1R3F-204ENST00000471261 CHRDL1Q9BU40 450 aa9.55□□□□□ -0.88
PPP1R3F-204ENST00000471261 C20orf24Q9BUV8 137 aa9.55□□□□□ -0.88
PPP1R3F-204ENST00000471261 PALMDQ9NP74 551 aa9.55□□□□□ -0.88
PPP1R3F-204ENST00000471261 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.55□□□□□ -0.88
PPP1R3F-204ENST00000471261 TECRQ9NZ01 308 aaKnown RBP9.55□□□□□ -0.88
PPP1R3F-204ENST00000471261 CACNG5Q9UF02 275 aa9.55□□□□□ -0.88
PPP1R3F-204ENST00000471261 UFC1Q9Y3C8 167 aa9.55□□□□□ -0.88
PPP1R3F-204ENST00000471261 DNAH9Q9NYC9 4486 aa9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 IGHV3OR16-8A0A075B7F1 116 aa9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 A8MWP6 167 aa9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 NUPL2O15504 423 aaKnown RBP9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 NXPH3O95157 252 aa9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 ANXA3P12429 323 aa9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 SUB1P53999 127 aaKnown RBP eCLIP9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 TRIQKQ629K1 86 aa9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 BTNL8Q6UX41 500 aa9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 SBSPONQ8IVN8 264 aa9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 Q8N1Y9 231 aa9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 GPR146Q96CH1 333 aa9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 WDR89Q96FK6 387 aaPredicted RBP9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 ZNF436Q9C0F3 470 aaPredicted RBP9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 SRRQ9GZT4 340 aa9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 TMEM56-RWDD3S4R434 201 aa9.54□□□□□ -0.88
PPP1R3F-204ENST00000471261 F8W735 103 aaPredicted RBP9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 I3L2K1 104 aa9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 YIF1AO95070 293 aa9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 MFAP4P55083 255 aa9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 CD81P60033 236 aa9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 SPCS3P61009 180 aa9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 TMEM187Q14656 261 aa9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 TMEM190Q8WZ59 177 aa9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 GALNT14Q96FL9 552 aa9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 ATP6V0BQ99437 205 aa9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 TUBA4BQ9H853 241 aa9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 DAZ1Q9NQZ3 744 aaKnown RBP9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 GAR1Q9NY12 217 aaKnown RBP9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 NDUFA13Q9P0J0 144 aa9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 MLXQ9UH92 298 aa9.53□□□□□ -0.88
PPP1R3F-204ENST00000471261 LINC00854A0A1B0GVQ3 168 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 CEBPZOSA8MTT3 80 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 INS-IGF2F8WCM5 200 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 NDUFA4O00483 81 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 ZNF207O43670 478 aaKnown RBP9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 GNG7O60262 68 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 SCAF4O95104 1147 aaKnown RBP9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 CTSGP08311 255 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 VAMP1P23763 118 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 ADMP35318 185 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 SUPT4H1P63272 117 aaKnown RBP9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 RELQ04864 619 aaPredicted RBP9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 LYZL2Q7Z4W2 148 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 TMEM61Q8N0U2 210 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 OR52E5Q8NH55 327 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 IL22RA2Q969J5 263 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 MARC2Q969Z3 335 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 TXN2Q99757 166 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 SLC25A21Q9BQT8 299 aaPredicted RBP9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 HEYLQ9NQ87 328 aaPredicted RBP9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 U3KQK5 164 aa9.52□□□□□ -0.89
PPP1R3F-204ENST00000471261 ZNF785A8K8V0 405 aa9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 CD7P09564 240 aa9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 SULT1A3P0DMM9 295 aa9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 SULT1A4P0DMN0 295 aa9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 RNASE2P10153 161 aaKnown RBP9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 OPRK1P41145 380 aa9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 CCR6P51684 374 aa9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 ELLP55199 621 aaPredicted RBP9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 SRPXP78539 464 aa9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 BAK1Q16611 211 aa9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 TMEM128Q5BJH2 165 aa9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 RBPMS2Q6ZRY4 209 aaKnown RBP9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 LGI3Q8N145 548 aa9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 DUSP18Q8NEJ0 188 aa9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 DEDD2Q8WXF8 326 aa9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 NEURL2Q9BR09 285 aa9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 MRPL27Q9P0M9 148 aaKnown RBP9.51□□□□□ -0.89
PPP1R3F-204ENST00000471261 A0A0B4J2A0 478 aa9.5□□□□□ -0.89
PPP1R3F-204ENST00000471261 CORTO00230 105 aa9.5□□□□□ -0.89
PPP1R3F-204ENST00000471261 FCGR2BP31994 310 aaPredicted RBP9.5□□□□□ -0.89
PPP1R3F-204ENST00000471261 NPBWR1P48145 328 aa9.5□□□□□ -0.89
PPP1R3F-204ENST00000471261 AARDQ4LEZ3 155 aa9.5□□□□□ -0.89
PPP1R3F-204ENST00000471261 SLC16A13Q7RTY0 426 aa9.5□□□□□ -0.89
PPP1R3F-204ENST00000471261 HIPK2Q9H2X6 1198 aa9.5□□□□□ -0.89
PPP1R3F-204ENST00000471261 ZMAT4Q9H898 229 aa9.5□□□□□ -0.89
PPP1R3F-204ENST00000471261 C19orf73Q9NVV2 129 aa9.5□□□□□ -0.89
PPP1R3F-204ENST00000471261 SHPKQ9UHJ6 478 aa9.5□□□□□ -0.89
PPP1R3F-204ENST00000471261 C15orf62A8K5M9 175 aa9.49□□□□□ -0.89
PPP1R3F-204ENST00000471261 C8orf88P0DMB2 117 aa9.49□□□□□ -0.89
PPP1R3F-204ENST00000471261 HTR2BP41595 481 aa9.49□□□□□ -0.89
PPP1R3F-204ENST00000471261 SMCO1Q147U7 214 aa9.49□□□□□ -0.89
PPP1R3F-204ENST00000471261 RBMS2Q15434 407 aaKnown RBP9.49□□□□□ -0.89
PPP1R3F-204ENST00000471261 ANKRD55Q3KP44 614 aa9.49□□□□□ -0.89
PPP1R3F-204ENST00000471261 NMSQ5H8A3 153 aa9.49□□□□□ -0.89
PPP1R3F-204ENST00000471261 CENPSQ8N2Z9 138 aa9.49□□□□□ -0.89
PPP1R3F-204ENST00000471261 DEFB125Q8N687 156 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms