RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 COMMD7Q86VX2 200 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 TEX29Q8N6K0 151 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 Q8N9W7 124 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 DMBX1Q8NFW5 382 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 NPBQ8NG41 125 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 IL22RA2Q969J5 263 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 SMIM3Q9BZL3 60 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 MAGT1Q9H0U3 335 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 FBXL15Q9H469 300 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 RAB18Q9NP72 206 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 COMMD9Q9P000 198 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 SIGLEC9Q9Y336 463 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 MMP24Q9Y5R2 645 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 RFNGQ9Y644 331 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 HIVEP2P31629 2446 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 A0A1B0GW64 132 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 DNAJC9-AS1A6NH13 148 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 CGB1A6NKQ9 187 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 LINC01548A6NM66 108 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 NCBP2LA6PVI3 153 aaKnown RBP3.73□□□□□ -1.81
SF3B1-208ENST00000470268 RRHO14718 337 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 NBR2O15453 112 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 PITX3O75364 302 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 KBTBD11O94819 623 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 OR2F2O95006 317 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 HRASP01112 189 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 SLC25A4P12235 298 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 LGALS7P47929 136 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 OR2B8PP59922 312 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 UBE2KP61086 200 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 BLCAPP62952 87 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 SRPXP78539 464 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 CFHR3Q02985 330 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 COTL1Q14019 142 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 CXorf66Q5JRM2 361 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-208ENST00000470268 C10orf55Q5SWW7 151 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 PPP1R27Q86WC6 154 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 KCNRGQ8N5I3 272 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 C5orf56Q8N8D9 126 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 THAP6Q8TBB0 222 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 SSMEM1Q8WWF3 244 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 LSM10Q969L4 123 aaKnown RBP3.73□□□□□ -1.81
SF3B1-208ENST00000470268 C2orf50Q96LR7 162 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 CLCC1Q96S66 551 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 RNF5Q99942 180 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 HSPB9Q9BQS6 159 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 SLC25A33Q9BSK2 321 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 ZNF471Q9BX82 626 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-208ENST00000470268 NMES1Q9C002 83 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 ZNF430Q9H8G1 570 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-208ENST00000470268 CYTL1Q9NRR1 136 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 BET1LQ9NYM9 111 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 METTL1Q9UBP6 276 aaKnown RBP3.73□□□□□ -1.81
SF3B1-208ENST00000470268 CACNG5Q9UF02 275 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 VPREB3Q9UKI3 123 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 CBY1Q9Y3M2 126 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 TMED3Q9Y3Q3 217 aa3.73□□□□□ -1.81
SF3B1-208ENST00000470268 DUXBA0A1W2PPF3 345 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 K7EPK0 472 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 UPK2O00526 184 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 BCL2L11O43521 198 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 TMEM50AO95807 157 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 NMBP08949 121 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 FAM157CP0CG43 387 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 HILS1P60008 231 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 RPL15P61313 204 aaKnown RBP3.72□□□□□ -1.81
SF3B1-208ENST00000470268 NDPQ00604 133 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 BTN1A1Q13410 526 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 PRSS8Q16651 343 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 C5orf64Q2M2E5 130 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 ACOT7LQ6ZUV0 252 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 H2BFWTQ7Z2G1 175 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 TEX45Q8NA69 505 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 OR5R1Q8NH85 324 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 TMEM167AQ8TBQ9 72 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 TSNAXQ99598 290 aaKnown RBP3.72□□□□□ -1.81
SF3B1-208ENST00000470268 QTRT1Q9BXR0 403 aaKnown RBP3.72□□□□□ -1.81
SF3B1-208ENST00000470268 UBQLN2Q9UHD9 624 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 MOB4Q9Y3A3 225 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 FBXO7Q9Y3I1 522 aa3.72□□□□□ -1.81
SF3B1-208ENST00000470268 IGHV7-81A0A0B4J1V7 117 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 A0A1B0GU03 582 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 PGPEP1LA6NFU8 196 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 ZNF98A6NK75 572 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 C15orf61A6NNL5 157 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 ST8SIA3O43173 380 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 FGF16O43320 207 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 GPR137BO60478 399 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 CIDEAO60543 219 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 CLN5O75503 358 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 DEDDO75618 318 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 CA2P00918 260 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 IFNA7P01567 189 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 ERVK-16P61578 105 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 VAMP2P63027 116 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 CX3CL1P78423 397 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 S100A12P80511 92 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 FGL1Q08830 312 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 SMCO1Q147U7 214 aa3.71□□□□□ -1.81
SF3B1-208ENST00000470268 VMA21Q3ZAQ7 101 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms