RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 BMPR1BO00238 502 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 COX19Q49B96 90 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 WDR82Q6UXN9 313 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 ZNF439Q8NDP4 499 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 SEPSECSQ9HD40 501 aaKnown RBP11.42□□□□□ -0.58
GPC1-208ENST00000469694 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 TRGV10A0A0A0MS01 117 aa11.41□□□□□ -0.58
GPC1-208ENST00000469694 IGLL1P15814 213 aa11.41□□□□□ -0.58
GPC1-208ENST00000469694 NTF3P20783 257 aa11.41□□□□□ -0.58
GPC1-208ENST00000469694 TPRX1Q8N7U7 411 aa11.41□□□□□ -0.58
GPC1-208ENST00000469694 HES4Q9HCC6 221 aa11.41□□□□□ -0.58
GPC1-208ENST00000469694 CHTOPQ9Y3Y2 248 aaKnown RBP11.41□□□□□ -0.58
GPC1-208ENST00000469694 MBNL2Q5VZF2 373 aaKnown RBP11.41□□□□□ -0.58
GPC1-208ENST00000469694 CXXC4Q9H2H0 198 aa11.41□□□□□ -0.58
GPC1-208ENST00000469694 TRAPPC2LQ9UL33 140 aa11.41□□□□□ -0.58
GPC1-208ENST00000469694 H0YJW9 148 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 SPRY3O43610 288 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 HAND1O96004 215 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 PSG1P11464 419 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 TMEM11P17152 192 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 WFDC8Q8IUA0 241 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 C11orf52Q96A22 123 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 OR2D2Q9H210 308 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.4□□□□□ -0.58
GPC1-208ENST00000469694 C15orf62A8K5M9 175 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 S100A7P31151 101 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 OPRK1P41145 380 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 GABRA2P47869 451 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 LINC00205P59089 165 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 SELENOVP59797 346 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 ZNF816Q0VGE8 651 aaPredicted RBP11.4□□□□□ -0.58
GPC1-208ENST00000469694 SPINK9Q5DT21 86 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 ERASQ7Z444 233 aa11.4□□□□□ -0.58
GPC1-208ENST00000469694 TMEM238C9JI98 176 aa11.39□□□□□ -0.59
GPC1-208ENST00000469694 TAX1BP3O14907 124 aa11.39□□□□□ -0.59
GPC1-208ENST00000469694 OR10J4P0C629 311 aa11.39□□□□□ -0.59
GPC1-208ENST00000469694 RPL30P62888 115 aaKnown RBP11.39□□□□□ -0.59
GPC1-208ENST00000469694 ZNF146Q15072 292 aa11.39□□□□□ -0.59
GPC1-208ENST00000469694 LRBAP50851 2863 aa11.39□□□□□ -0.59
GPC1-208ENST00000469694 AESQ08117 197 aa11.39□□□□□ -0.59
GPC1-208ENST00000469694 FAM201AQ5SY85 155 aa11.39□□□□□ -0.59
GPC1-208ENST00000469694 Q8IYB0 196 aa11.39□□□□□ -0.59
GPC1-208ENST00000469694 ZNF808Q8N4W9 903 aaPredicted RBP11.39□□□□□ -0.59
GPC1-208ENST00000469694 DLL1O00548 723 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 MPDU1O75352 247 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 HLA-DQA1P01909 254 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 SLC35B1P78383 322 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 MOB1BQ7L9L4 216 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 FAM169BQ8N8A8 192 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 LRRC29Q8WV35 223 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 NUDT11Q96G61 164 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 IGHV3OR15-7A0A075B7D8 119 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 TRGV8A0A0C4DH27 118 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 AMY1AP04745 511 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 CD40P25942 277 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 GCHFRP30047 84 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 RELBQ01201 579 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 ACP7Q6ZNF0 438 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 ZNF497Q6ZNH5 498 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 ZCCHC24Q8N2G6 241 aaKnown RBP11.38□□□□□ -0.59
GPC1-208ENST00000469694 OR2V2Q96R30 315 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 ZNF835Q9Y2P0 537 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 C16orf97H3BN30 126 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 RAB29O14966 203 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 BRWD1-AS2P59051 145 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 MPV17L2Q567V2 206 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 OR4A47Q6IF82 309 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 EBLN2Q6P2I7 272 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 ZNF645Q8N7E2 425 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 NEUROG1Q92886 237 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 PLPPR2Q96GM1 343 aa11.38□□□□□ -0.59
GPC1-208ENST00000469694 RBMXL2O75526 392 aaKnown RBP11.37□□□□□ -0.59
GPC1-208ENST00000469694 CLDN14O95500 239 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 LINC00869P0C866 280 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 GLRXP35754 106 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 PDLIM3Q53GG5 364 aaPredicted RBP11.37□□□□□ -0.59
GPC1-208ENST00000469694 Q56UQ5 140 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 TREML4Q6UXN2 200 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 MOGAT3Q86VF5 341 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 ZBTB34Q8NCN2 500 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 OR8B3Q8NGG8 313 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 C18orf32Q8TCD1 76 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 OR8B2Q96RD0 313 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 FAM181BA6NEQ2 426 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 APCSP02743 223 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 THBDP07204 575 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 TNXAQ16473 311 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 MIC13Q5XKP0 118 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 H2BFWTQ7Z2G1 175 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 ZNF596Q8TC21 504 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 DCTN5Q9BTE1 182 aa11.37□□□□□ -0.59
GPC1-208ENST00000469694 RNASE7Q9H1E1 156 aaKnown RBP11.37□□□□□ -0.59
GPC1-208ENST00000469694 C17orf98A8MV24 154 aa11.36□□□□□ -0.59
GPC1-208ENST00000469694 CIDEAO60543 219 aa11.36□□□□□ -0.59
GPC1-208ENST00000469694 IGHV3-13P01766 116 aa11.36□□□□□ -0.59
GPC1-208ENST00000469694 EIF4EBP1Q13541 118 aaPredicted RBP11.36□□□□□ -0.59
GPC1-208ENST00000469694 C5orf30Q96GV9 206 aa11.36□□□□□ -0.59
GPC1-208ENST00000469694 MGST2Q99735 147 aa11.36□□□□□ -0.59
GPC1-208ENST00000469694 OSTCQ9NRP0 149 aa11.36□□□□□ -0.59
GPC1-208ENST00000469694 OR2T8A6NH00 312 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms