RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 IGHV3-48P01763 117 aa13.1□□□□□ -0.31
TTC28-205ENST00000469670 CD74P04233 296 aa13.1□□□□□ -0.31
TTC28-205ENST00000469670 RCN1Q15293 331 aa13.1□□□□□ -0.31
TTC28-205ENST00000469670 OGFRL1Q5TC84 451 aaPredicted RBP13.1□□□□□ -0.31
TTC28-205ENST00000469670 UBE2UQ5VVX9 321 aa13.1□□□□□ -0.31
TTC28-205ENST00000469670 Q6ZRM9 215 aa13.1□□□□□ -0.31
TTC28-205ENST00000469670 SMIM30A4D0T7 59 aa13.09□□□□□ -0.31
TTC28-205ENST00000469670 CDK2AP2O75956 126 aa13.09□□□□□ -0.31
TTC28-205ENST00000469670 MT-CO2P00403 227 aa13.09□□□□□ -0.31
TTC28-205ENST00000469670 KRASP01116 189 aa13.09□□□□□ -0.31
TTC28-205ENST00000469670 NPY1RP25929 384 aa13.09□□□□□ -0.31
TTC28-205ENST00000469670 TMEM17Q86X19 198 aa13.09□□□□□ -0.31
TTC28-205ENST00000469670 PRNDQ9UKY0 176 aa13.09□□□□□ -0.31
TTC28-205ENST00000469670 K7EQG2 157 aa13.08□□□□□ -0.32
TTC28-205ENST00000469670 F2RP25116 425 aa13.08□□□□□ -0.32
TTC28-205ENST00000469670 G6PCP35575 357 aa13.08□□□□□ -0.32
TTC28-205ENST00000469670 C1orf134Q5TEV5 83 aa13.08□□□□□ -0.32
TTC28-205ENST00000469670 HOGA1Q86XE5 327 aa13.08□□□□□ -0.32
TTC28-205ENST00000469670 CADM3Q8N126 398 aa13.08□□□□□ -0.32
TTC28-205ENST00000469670 GRAMD2BQ96HH9 432 aa13.08□□□□□ -0.32
TTC28-205ENST00000469670 TMEM231Q9H6L2 316 aa13.08□□□□□ -0.32
TTC28-205ENST00000469670 FKBP11Q9NYL4 201 aa13.08□□□□□ -0.32
TTC28-205ENST00000469670 DBX1A6NMT0 343 aa13.07□□□□□ -0.32
TTC28-205ENST00000469670 C16orf90A8MZG2 172 aa13.07□□□□□ -0.32
TTC28-205ENST00000469670 ZNF688P0C7X2 276 aa13.07□□□□□ -0.32
TTC28-205ENST00000469670 LPAR6P43657 344 aa13.07□□□□□ -0.32
TTC28-205ENST00000469670 ACTL10Q5JWF8 245 aa13.07□□□□□ -0.32
TTC28-205ENST00000469670 STXBP6Q8NFX7 210 aa13.07□□□□□ -0.32
TTC28-205ENST00000469670 FCAMRQ8WWV6 532 aa13.07□□□□□ -0.32
TTC28-205ENST00000469670 PINX1Q96BK5 328 aaKnown RBP13.07□□□□□ -0.32
TTC28-205ENST00000469670 ZFAND3Q9H8U3 227 aa13.07□□□□□ -0.32
TTC28-205ENST00000469670 PUS1Q9Y606 427 aaKnown RBP eCLIP13.07□□□□□ -0.32
TTC28-205ENST00000469670 LRP1BQ9NZR2 4599 aa13.06□□□□□ -0.32
TTC28-205ENST00000469670 TRDV1A0A1B0GX56 115 aa13.06□□□□□ -0.32
TTC28-205ENST00000469670 RLN1P04808 185 aa13.06□□□□□ -0.32
TTC28-205ENST00000469670 GNRHRP30968 328 aa13.06□□□□□ -0.32
TTC28-205ENST00000469670 C22orf42Q6IC83 251 aa13.06□□□□□ -0.32
TTC28-205ENST00000469670 ZNF600Q6ZNG1 722 aa13.06□□□□□ -0.32
TTC28-205ENST00000469670 PRSS48Q7RTY5 328 aa13.06□□□□□ -0.32
TTC28-205ENST00000469670 TPRA1Q86W33 373 aa13.06□□□□□ -0.32
TTC28-205ENST00000469670 NOTOA8MTQ0 251 aa13.05□□□□□ -0.32
TTC28-205ENST00000469670 FCER2P06734 321 aa13.05□□□□□ -0.32
TTC28-205ENST00000469670 TSPAN14Q8NG11 270 aa13.05□□□□□ -0.32
TTC28-205ENST00000469670 BORCS5Q969J3 196 aa13.05□□□□□ -0.32
TTC28-205ENST00000469670 MOB3AQ96BX8 217 aa13.05□□□□□ -0.32
TTC28-205ENST00000469670 VCXQ9H320 206 aa13.05□□□□□ -0.32
TTC28-205ENST00000469670 NDUFB11Q9NX14 153 aa13.05□□□□□ -0.32
TTC28-205ENST00000469670 A0A1W2PS18 150 aa13.04□□□□□ -0.32
TTC28-205ENST00000469670 PGLYRP1O75594 196 aaPredicted RBP13.04□□□□□ -0.32
TTC28-205ENST00000469670 NPPCP23582 126 aa13.04□□□□□ -0.32
TTC28-205ENST00000469670 NPBWR1P48145 328 aa13.04□□□□□ -0.32
TTC28-205ENST00000469670 HERV-K104P61576 105 aa13.04□□□□□ -0.32
TTC28-205ENST00000469670 ZNF114Q8NC26 417 aa13.04□□□□□ -0.32
TTC28-205ENST00000469670 FAM210BQ96KR6 192 aa13.04□□□□□ -0.32
TTC28-205ENST00000469670 TSC22D3Q99576 134 aa13.04□□□□□ -0.32
TTC28-205ENST00000469670 DAPK2Q9UIK4 370 aa13.04□□□□□ -0.32
TTC28-205ENST00000469670 HERC1Q15751 4861 aa13.03□□□□□ -0.32
TTC28-205ENST00000469670 TRAV18A0A075B6X5 111 aa13.03□□□□□ -0.32
TTC28-205ENST00000469670 A0A1B0GU03 582 aa13.03□□□□□ -0.32
TTC28-205ENST00000469670 RNF212Q495C1 297 aa13.03□□□□□ -0.32
TTC28-205ENST00000469670 ZNF367Q7RTV3 350 aa13.03□□□□□ -0.32
TTC28-205ENST00000469670 OR5AP2Q8NGF4 316 aa13.03□□□□□ -0.32
TTC28-205ENST00000469670 LGALS14Q8TCE9 139 aa13.03□□□□□ -0.32
TTC28-205ENST00000469670 DCANP1Q8TF63 244 aa13.03□□□□□ -0.32
TTC28-205ENST00000469670 RHBDL2Q9NX52 303 aa13.03□□□□□ -0.32
TTC28-205ENST00000469670 AGRNO00468 2067 aa13.03□□□□□ -0.32
TTC28-205ENST00000469670 SPART-AS1P0CW21 52 aa13.02□□□□□ -0.33
TTC28-205ENST00000469670 P2RY1P47900 373 aa13.02□□□□□ -0.33
TTC28-205ENST00000469670 TBCEQ15813 527 aaPredicted RBP13.02□□□□□ -0.33
TTC28-205ENST00000469670 Q8N1X5 172 aa13.02□□□□□ -0.33
TTC28-205ENST00000469670 RAB40CQ96S21 281 aa13.02□□□□□ -0.33
TTC28-205ENST00000469670 C1QTNF4Q9BXJ3 329 aa13.02□□□□□ -0.33
TTC28-205ENST00000469670 PRCDQ00LT1 54 aa13.01□□□□□ -0.33
TTC28-205ENST00000469670 TNP2Q05952 138 aa13.01□□□□□ -0.33
TTC28-205ENST00000469670 METTL26Q96S19 204 aa13.01□□□□□ -0.33
TTC28-205ENST00000469670 XCL2Q9UBD3 114 aa13.01□□□□□ -0.33
TTC28-205ENST00000469670 TMEM50AO95807 157 aa13□□□□□ -0.33
TTC28-205ENST00000469670 CRYBB3P26998 211 aa13□□□□□ -0.33
TTC28-205ENST00000469670 ERHP84090 104 aaKnown RBP13□□□□□ -0.33
TTC28-205ENST00000469670 PSMG4Q5JS54 123 aa13□□□□□ -0.33
TTC28-205ENST00000469670 RRP15Q9Y3B9 282 aaKnown RBP13□□□□□ -0.33
TTC28-205ENST00000469670 FGF9P31371 208 aaPredicted RBP12.99□□□□□ -0.33
TTC28-205ENST00000469670 EMP1P54849 157 aa12.99□□□□□ -0.33
TTC28-205ENST00000469670 NUTF2P61970 127 aaKnown RBP12.99□□□□□ -0.33
TTC28-205ENST00000469670 KCTD21Q4G0X4 260 aa12.99□□□□□ -0.33
TTC28-205ENST00000469670 SFXN4Q6P4A7 337 aa12.99□□□□□ -0.33
TTC28-205ENST00000469670 CMTM1Q8IZ96 169 aa12.99□□□□□ -0.33
TTC28-205ENST00000469670 OR4A16Q8NH70 328 aa12.99□□□□□ -0.33
TTC28-205ENST00000469670 AUNIPQ9H7T9 357 aa12.99□□□□□ -0.33
TTC28-205ENST00000469670 EHFQ9NZC4 300 aa12.99□□□□□ -0.33
TTC28-205ENST00000469670 APOBP04114 4563 aaKnown RBP12.98□□□□□ -0.33
TTC28-205ENST00000469670 TMEM189A5PLL7 270 aa12.98□□□□□ -0.33
TTC28-205ENST00000469670 MEIS3P1A6NDR6 274 aa12.98□□□□□ -0.33
TTC28-205ENST00000469670 HELTA6NFD8 242 aa12.98□□□□□ -0.33
TTC28-205ENST00000469670 CBX5P45973 191 aa12.98□□□□□ -0.33
TTC28-205ENST00000469670 PPP5CP53041 499 aa12.98□□□□□ -0.33
TTC28-205ENST00000469670 DHRS2Q13268 280 aa12.98□□□□□ -0.33
TTC28-205ENST00000469670 DHRS11Q6UWP2 260 aa12.98□□□□□ -0.33
TTC28-205ENST00000469670 SLC25A38Q96DW6 304 aa12.98□□□□□ -0.33
TTC28-205ENST00000469670 NARS2Q96I59 477 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms