RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 PDCD10Q9BUL8 212 aa13.73□□□□□ -0.21
PHGDH-204ENST00000469443 TMEM222Q9H0R3 208 aa13.73□□□□□ -0.21
PHGDH-204ENST00000469443 C5orf66Q9H5L9 145 aa13.73□□□□□ -0.21
PHGDH-204ENST00000469443 NAA60Q9H7X0 242 aa13.73□□□□□ -0.21
PHGDH-204ENST00000469443 DAZ1Q9NQZ3 744 aaKnown RBP13.73□□□□□ -0.21
PHGDH-204ENST00000469443 GPR132Q9UNW8 380 aa13.73□□□□□ -0.21
PHGDH-204ENST00000469443 DNAH7Q8WXX0 4024 aa13.73□□□□□ -0.21
PHGDH-204ENST00000469443 A0A0G2JRQ6 117 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 TEX13DA0A0J9YY54 714 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-204ENST00000469443 FABP12A6NFH5 140 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 OR11H12B2RN74 326 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 INS-IGF2F8WCM5 200 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 C3orf84H3BNL1 204 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 SCAF4O95104 1147 aaKnown RBP13.72□□□□□ -0.21
PHGDH-204ENST00000469443 CDS2O95674 445 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 MT-CO2P00403 227 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 IFNA17P01571 189 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 CTSGP08311 255 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 FCGR2BP31994 310 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-204ENST00000469443 MFAP4P55083 255 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 LINC00322Q6ZN03 302 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-204ENST00000469443 SLC16A13Q7RTY0 426 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 DEFB125Q8N687 156 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 RNASE11Q8TAA1 199 aaKnown RBP13.72□□□□□ -0.21
PHGDH-204ENST00000469443 GLYATL2Q8WU03 294 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 WFDC10AQ9H1F0 79 aa13.72□□□□□ -0.21
PHGDH-204ENST00000469443 NBEAL2Q6ZNJ1 2754 aa13.71□□□□□ -0.21
PHGDH-204ENST00000469443 NUPL2O15504 423 aaKnown RBP13.71□□□□□ -0.21
PHGDH-204ENST00000469443 SNCAP37840 140 aa13.71□□□□□ -0.21
PHGDH-204ENST00000469443 DHODHQ02127 395 aa13.71□□□□□ -0.21
PHGDH-204ENST00000469443 ANKRD55Q3KP44 614 aa13.71□□□□□ -0.21
PHGDH-204ENST00000469443 RBPMS2Q6ZRY4 209 aaKnown RBP13.71□□□□□ -0.21
PHGDH-204ENST00000469443 FAM219AQ8IW50 185 aa13.71□□□□□ -0.21
PHGDH-204ENST00000469443 OR52B4Q8NGK2 314 aa13.71□□□□□ -0.21
PHGDH-204ENST00000469443 PINX1Q96BK5 328 aaKnown RBP13.71□□□□□ -0.21
PHGDH-204ENST00000469443 CITED4Q96RK1 184 aa13.71□□□□□ -0.21
PHGDH-204ENST00000469443 C20orf24Q9BUV8 137 aa13.71□□□□□ -0.21
PHGDH-204ENST00000469443 SRD5A3Q9H8P0 318 aa13.71□□□□□ -0.21
PHGDH-204ENST00000469443 SCP2D1Q9UJQ7 156 aa13.71□□□□□ -0.21
PHGDH-204ENST00000469443 CCDC160A6NGH7 325 aa13.7□□□□□ -0.22
PHGDH-204ENST00000469443 CRYM-AS1A6NIL9 109 aa13.7□□□□□ -0.22
PHGDH-204ENST00000469443 K7EMT4 169 aa13.7□□□□□ -0.22
PHGDH-204ENST00000469443 RELQ04864 619 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-204ENST00000469443 LHFPL5Q8TAF8 219 aa13.7□□□□□ -0.22
PHGDH-204ENST00000469443 MUC7Q8TAX7 377 aa13.7□□□□□ -0.22
PHGDH-204ENST00000469443 RBPMSQ93062 196 aaKnown RBP13.7□□□□□ -0.22
PHGDH-204ENST00000469443 IGHV3OR16-8A0A075B7F1 116 aa13.69□□□□□ -0.22
PHGDH-204ENST00000469443 C15orf62A8K5M9 175 aa13.69□□□□□ -0.22
PHGDH-204ENST00000469443 GNG7O60262 68 aa13.69□□□□□ -0.22
PHGDH-204ENST00000469443 IGHV3-48P01763 117 aa13.69□□□□□ -0.22
PHGDH-204ENST00000469443 ETV6P41212 452 aa13.69□□□□□ -0.22
PHGDH-204ENST00000469443 HOXA1P49639 335 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-204ENST00000469443 SUB1P53999 127 aaKnown RBP eCLIP13.69□□□□□ -0.22
PHGDH-204ENST00000469443 Q6ZRM9 215 aa13.69□□□□□ -0.22
PHGDH-204ENST00000469443 SELENOHQ8IZQ5 122 aaKnown RBP13.69□□□□□ -0.22
PHGDH-204ENST00000469443 ZNF414Q96IQ9 312 aa13.69□□□□□ -0.22
PHGDH-204ENST00000469443 SCGB3A2Q96PL1 93 aa13.69□□□□□ -0.22
PHGDH-204ENST00000469443 ENY2Q9NPA8 101 aa13.69□□□□□ -0.22
PHGDH-204ENST00000469443 RBMY1BA6NDE4 496 aaKnown RBP13.68□□□□□ -0.22
PHGDH-204ENST00000469443 RBMY1EA6NEQ0 496 aaKnown RBP13.68□□□□□ -0.22
PHGDH-204ENST00000469443 RBMY1DP0C7P1 496 aaKnown RBP13.68□□□□□ -0.22
PHGDH-204ENST00000469443 RNASE2P10153 161 aaKnown RBP13.68□□□□□ -0.22
PHGDH-204ENST00000469443 AARDQ4LEZ3 155 aa13.68□□□□□ -0.22
PHGDH-204ENST00000469443 TMEM268Q5VZI3 342 aa13.68□□□□□ -0.22
PHGDH-204ENST00000469443 PVRIGQ6DKI7 326 aa13.68□□□□□ -0.22
PHGDH-204ENST00000469443 SPAG8Q99932 426 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-204ENST00000469443 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-204ENST00000469443 MCUBQ9NWR8 336 aa13.68□□□□□ -0.22
PHGDH-204ENST00000469443 CORTO00230 105 aa13.67□□□□□ -0.22
PHGDH-204ENST00000469443 TSPAN4O14817 238 aa13.67□□□□□ -0.22
PHGDH-204ENST00000469443 ZNF207O43670 478 aaKnown RBP13.67□□□□□ -0.22
PHGDH-204ENST00000469443 NPBWR1P48145 328 aa13.67□□□□□ -0.22
PHGDH-204ENST00000469443 SPCS3P61009 180 aa13.67□□□□□ -0.22
PHGDH-204ENST00000469443 LAMTOR1Q6IAA8 161 aa13.67□□□□□ -0.22
PHGDH-204ENST00000469443 DUSP18Q8NEJ0 188 aa13.67□□□□□ -0.22
PHGDH-204ENST00000469443 OR52E5Q8NH55 327 aa13.67□□□□□ -0.22
PHGDH-204ENST00000469443 TMEM230Q96A57 120 aa13.67□□□□□ -0.22
PHGDH-204ENST00000469443 GALNT14Q96FL9 552 aa13.67□□□□□ -0.22
PHGDH-204ENST00000469443 KCNIP3Q9Y2W7 256 aa13.67□□□□□ -0.22
PHGDH-204ENST00000469443 TMEM56-RWDD3S4R434 201 aa13.67□□□□□ -0.22
PHGDH-204ENST00000469443 YIF1AO95070 293 aa13.66□□□□□ -0.22
PHGDH-204ENST00000469443 FAUP35544 74 aaKnown RBP13.66□□□□□ -0.22
PHGDH-204ENST00000469443 PYDC2Q56P42 97 aa13.66□□□□□ -0.22
PHGDH-204ENST00000469443 IL22RA2Q969J5 263 aa13.66□□□□□ -0.22
PHGDH-204ENST00000469443 GPR146Q96CH1 333 aa13.66□□□□□ -0.22
PHGDH-204ENST00000469443 OR10C1Q96KK4 312 aa13.66□□□□□ -0.22
PHGDH-204ENST00000469443 RBM38Q9H0Z9 239 aaKnown RBP13.66□□□□□ -0.22
PHGDH-204ENST00000469443 HIPK2Q9H2X6 1198 aa13.66□□□□□ -0.22
PHGDH-204ENST00000469443 EDA2RQ9HAV5 297 aa13.66□□□□□ -0.22
PHGDH-204ENST00000469443 CACNG5Q9UF02 275 aa13.66□□□□□ -0.22
PHGDH-204ENST00000469443 SMPXQ9UHP9 88 aa13.66□□□□□ -0.22
PHGDH-204ENST00000469443 V9GYH0 126 aa13.66□□□□□ -0.22
PHGDH-204ENST00000469443 S100A5P33763 92 aa13.65□□□□□ -0.22
PHGDH-204ENST00000469443 KLF9Q13886 244 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-204ENST00000469443 TMEM187Q14656 261 aa13.65□□□□□ -0.22
PHGDH-204ENST00000469443 BSXQ3C1V8 233 aa13.65□□□□□ -0.22
PHGDH-204ENST00000469443 TRIM63Q969Q1 353 aa13.65□□□□□ -0.22
PHGDH-204ENST00000469443 RETNQ9HD89 108 aa13.65□□□□□ -0.22
PHGDH-204ENST00000469443 IGHV7-4-1A0A0J9YVY3 117 aa13.64□□□□□ -0.23
PHGDH-204ENST00000469443 AP3S2P59780 193 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms