RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 AKIRIN2Q53H80 203 aa9.35□□□□□ -0.91
HDAC6-217ENST00000469223 THOC7Q6I9Y2 204 aaKnown RBP9.35□□□□□ -0.91
HDAC6-217ENST00000469223 NPBQ8NG41 125 aa9.35□□□□□ -0.91
HDAC6-217ENST00000469223 OR2T35Q8NGX2 323 aa9.35□□□□□ -0.91
HDAC6-217ENST00000469223 MFFQ9GZY8 342 aa9.35□□□□□ -0.91
HDAC6-217ENST00000469223 TMEM222Q9H0R3 208 aa9.35□□□□□ -0.91
HDAC6-217ENST00000469223 PEF1Q9UBV8 284 aaKnown RBP9.35□□□□□ -0.91
HDAC6-217ENST00000469223 FAT1Q14517 4588 aa9.35□□□□□ -0.91
HDAC6-217ENST00000469223 DBX1A6NMT0 343 aa9.34□□□□□ -0.91
HDAC6-217ENST00000469223 APOC4P55056 127 aa9.34□□□□□ -0.91
HDAC6-217ENST00000469223 SUPT4H1P63272 117 aaKnown RBP9.34□□□□□ -0.91
HDAC6-217ENST00000469223 GNMTQ14749 295 aa9.34□□□□□ -0.91
HDAC6-217ENST00000469223 SMCO1Q147U7 214 aa9.34□□□□□ -0.91
HDAC6-217ENST00000469223 FAM71F2Q6NXP2 309 aa9.34□□□□□ -0.91
HDAC6-217ENST00000469223 NOXA1Q86UR1 476 aa9.34□□□□□ -0.91
HDAC6-217ENST00000469223 C11orf45Q8TAV5 145 aa9.34□□□□□ -0.91
HDAC6-217ENST00000469223 RBPMSQ93062 196 aaKnown RBP9.34□□□□□ -0.91
HDAC6-217ENST00000469223 OR2A7Q96R45 310 aa9.34□□□□□ -0.91
HDAC6-217ENST00000469223 AIFM2Q9BRQ8 373 aa9.34□□□□□ -0.91
HDAC6-217ENST00000469223 NMES1Q9C002 83 aa9.34□□□□□ -0.91
HDAC6-217ENST00000469223 CACFD1Q9UGQ2 172 aa9.34□□□□□ -0.91
HDAC6-217ENST00000469223 HMCN2Q8NDA2 5059 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 A0A0G2JLM5 398 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 FCN1O00602 326 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 TNFSF12O43508 249 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 CDS2O95674 445 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 RLN2P04090 185 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 CXCL3P19876 107 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 UCP1P25874 307 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 NUP62P37198 522 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-217ENST00000469223 TMEM187Q14656 261 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 TMEM268Q5VZI3 342 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 ZNF833PQ6ZTB9 187 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 ODF3L1Q8IXM7 274 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 OR51H1Q8NH63 302 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 THAP6Q8TBB0 222 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 TCTEX1D2Q8WW35 142 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 RRNAD1Q96FB5 475 aaKnown RBP9.33□□□□□ -0.92
HDAC6-217ENST00000469223 C2orf50Q96LR7 162 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 TMEM56Q96MV1 263 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 FYTTD1Q96QD9 318 aaKnown RBP9.33□□□□□ -0.92
HDAC6-217ENST00000469223 FBXL7Q9UJT9 491 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 TMEM56-RWDD3S4R434 201 aa9.33□□□□□ -0.92
HDAC6-217ENST00000469223 RRHO14718 337 aa9.32□□□□□ -0.92
HDAC6-217ENST00000469223 ST8SIA5O15466 376 aa9.32□□□□□ -0.92
HDAC6-217ENST00000469223 HOXB5P09067 269 aa9.32□□□□□ -0.92
HDAC6-217ENST00000469223 RRASP10301 218 aa9.32□□□□□ -0.92
HDAC6-217ENST00000469223 AKR1C2P52895 323 aa9.32□□□□□ -0.92
HDAC6-217ENST00000469223 ANKRD55Q3KP44 614 aa9.32□□□□□ -0.92
HDAC6-217ENST00000469223 FAM219AQ8IW50 185 aa9.32□□□□□ -0.92
HDAC6-217ENST00000469223 GRPEL2Q8TAA5 225 aa9.32□□□□□ -0.92
HDAC6-217ENST00000469223 GLYATL2Q8WU03 294 aa9.32□□□□□ -0.92
HDAC6-217ENST00000469223 TP53RKQ96S44 253 aa9.32□□□□□ -0.92
HDAC6-217ENST00000469223 CLCC1Q96S66 551 aa9.32□□□□□ -0.92
HDAC6-217ENST00000469223 AGMATQ9BSE5 352 aa9.32□□□□□ -0.92
HDAC6-217ENST00000469223 SDHAF2Q9NX18 166 aa9.32□□□□□ -0.92
HDAC6-217ENST00000469223 SAA2-SAA4A0A096LPE2 208 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 BOLA2-SMG1P6H3BVE0 249 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 M0R1X1 148 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 RBFOX2O43251 390 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDAC6-217ENST00000469223 APOA2P02652 100 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 SAA2P0DJI9 122 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-217ENST00000469223 PVALBP20472 110 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-217ENST00000469223 MC5RP33032 325 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 H2BFSP57053 126 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 ERVK-16P61578 105 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 RTL8BQ17RB0 113 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 IAH1Q2TAA2 248 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-217ENST00000469223 SP6Q3SY56 376 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 ZNF343Q6P1L6 599 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 TMEM61Q8N0U2 210 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 OR5T1Q8NG75 326 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 OR4S2Q8NH73 311 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 PARP12Q9H0J9 701 aaKnown RBP9.31□□□□□ -0.92
HDAC6-217ENST00000469223 IFI27L2Q9H2X8 130 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 AGRNO00468 2067 aa9.31□□□□□ -0.92
HDAC6-217ENST00000469223 H3BUA1 57 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 BMPR1BO00238 502 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 HPRT1P00492 218 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 CA2P00918 260 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 SLC25A6P12236 298 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 FOLR2P14207 255 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 PSMB6P28072 239 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 MFAP2P55001 183 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 GGNBP1Q5YKI7 109 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 C5orf24Q7Z6I8 188 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 SPAG16Q8N0X2 631 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 SLC35G3Q8N808 338 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 CACNG8Q8WXS5 425 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 LSM10Q969L4 123 aaKnown RBP9.3□□□□□ -0.92
HDAC6-217ENST00000469223 ABHD14BQ96IU4 210 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 RNF5Q99942 180 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 GSKIPQ9P0R6 139 aa9.3□□□□□ -0.92
HDAC6-217ENST00000469223 A0A1B0GU03 582 aa9.29□□□□□ -0.92
HDAC6-217ENST00000469223 C2orf70A6NJV1 201 aa9.29□□□□□ -0.92
HDAC6-217ENST00000469223 HMSDA8MTL9 139 aa9.29□□□□□ -0.92
HDAC6-217ENST00000469223 WRBO00258 174 aa9.29□□□□□ -0.92
HDAC6-217ENST00000469223 UBE2CO00762 179 aa9.29□□□□□ -0.92
HDAC6-217ENST00000469223 CCSO14618 274 aa9.29□□□□□ -0.92
HDAC6-217ENST00000469223 SHOXO15266 292 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms