RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 COMMD3Q9UBI1 195 aa8.97□□□□□ -0.97
COL5A1-207ENST00000469093 FBXL17Q9UF56 701 aa8.97□□□□□ -0.97
COL5A1-207ENST00000469093 IGHV3OR16-13A0A075B7E8 117 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 IGHV3-74A0A0B4J1X5 117 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 FAM25AB3EWG3 89 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 FAM25CB3EWG5 89 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 FAM25GB3EWG6 89 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 RGS5O15539 181 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 XRCC3O43542 346 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 MFAP4P55083 255 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 RBMS2Q15434 407 aaKnown RBP8.96□□□□□ -0.98
COL5A1-207ENST00000469093 UBE2NLQ5JXB2 153 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 GBGT1Q8N5D6 347 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 MCFD2Q8NI22 146 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 DYNC2LI1Q8TCX1 351 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 S100A16Q96FQ6 103 aaKnown RBP8.96□□□□□ -0.98
COL5A1-207ENST00000469093 TXN2Q99757 166 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 NXF2Q9GZY0 626 aaKnown RBP8.96□□□□□ -0.98
COL5A1-207ENST00000469093 C11orf68Q9H3H3 251 aaKnown RBP8.96□□□□□ -0.98
COL5A1-207ENST00000469093 TMEM14BQ9NUH8 114 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 PRNDQ9UKY0 176 aa8.96□□□□□ -0.98
COL5A1-207ENST00000469093 DEFB4AO15263 64 aa8.95□□□□□ -0.98
COL5A1-207ENST00000469093 IGHV3-48P01763 117 aa8.95□□□□□ -0.98
COL5A1-207ENST00000469093 PMP2P02689 132 aa8.95□□□□□ -0.98
COL5A1-207ENST00000469093 S100A5P33763 92 aa8.95□□□□□ -0.98
COL5A1-207ENST00000469093 CMTM1Q8IZ96 169 aa8.95□□□□□ -0.98
COL5A1-207ENST00000469093 LILRB2Q8N423 598 aa8.95□□□□□ -0.98
COL5A1-207ENST00000469093 C2CD4CQ8TF44 421 aa8.95□□□□□ -0.98
COL5A1-207ENST00000469093 MISP3Q96FF7 219 aa8.95□□□□□ -0.98
COL5A1-207ENST00000469093 CMTM3Q96MX0 182 aa8.95□□□□□ -0.98
COL5A1-207ENST00000469093 IFT46Q9NQC8 304 aa8.95□□□□□ -0.98
COL5A1-207ENST00000469093 ANAPC10Q9UM13 185 aa8.95□□□□□ -0.98
COL5A1-207ENST00000469093 A6NHS1 94 aa8.94□□□□□ -0.98
COL5A1-207ENST00000469093 C15orf61A6NNL5 157 aa8.94□□□□□ -0.98
COL5A1-207ENST00000469093 GPR31O00270 319 aa8.94□□□□□ -0.98
COL5A1-207ENST00000469093 MT-CO2P00403 227 aa8.94□□□□□ -0.98
COL5A1-207ENST00000469093 APOA1P02647 267 aa8.94□□□□□ -0.98
COL5A1-207ENST00000469093 APOHP02749 345 aaPredicted RBP8.94□□□□□ -0.98
COL5A1-207ENST00000469093 NAT1P18440 290 aa8.94□□□□□ -0.98
COL5A1-207ENST00000469093 PAFAH1B2P68402 229 aa8.94□□□□□ -0.98
COL5A1-207ENST00000469093 TCF24Q7RTU0 167 aa8.94□□□□□ -0.98
COL5A1-207ENST00000469093 LYSMD2Q8IV50 215 aa8.94□□□□□ -0.98
COL5A1-207ENST00000469093 OR6F1Q8NGZ6 308 aa8.94□□□□□ -0.98
COL5A1-207ENST00000469093 TSC22D3Q99576 134 aa8.94□□□□□ -0.98
COL5A1-207ENST00000469093 HPGDSO60760 199 aa8.93□□□□□ -0.98
COL5A1-207ENST00000469093 DFFBO76075 338 aa8.93□□□□□ -0.98
COL5A1-207ENST00000469093 CD5P06127 495 aa8.93□□□□□ -0.98
COL5A1-207ENST00000469093 TCTAP57738 103 aa8.93□□□□□ -0.98
COL5A1-207ENST00000469093 TMEM187Q14656 261 aa8.93□□□□□ -0.98
COL5A1-207ENST00000469093 TMEM69Q5SWH9 247 aa8.93□□□□□ -0.98
COL5A1-207ENST00000469093 TOMM20LQ6UXN7 152 aa8.93□□□□□ -0.98
COL5A1-207ENST00000469093 OR5H2Q8NGV7 314 aa8.93□□□□□ -0.98
COL5A1-207ENST00000469093 ST8SIA2Q92186 375 aa8.93□□□□□ -0.98
COL5A1-207ENST00000469093 SEC22AQ96IW7 307 aa8.93□□□□□ -0.98
COL5A1-207ENST00000469093 VSIRQ9H7M9 311 aa8.93□□□□□ -0.98
COL5A1-207ENST00000469093 APLNQ9ULZ1 77 aa8.93□□□□□ -0.98
COL5A1-207ENST00000469093 HERC2O95714 4834 aa8.93□□□□□ -0.98
COL5A1-207ENST00000469093 GNG7O60262 68 aa8.92□□□□□ -0.98
COL5A1-207ENST00000469093 CA1P00915 261 aaPredicted RBP8.92□□□□□ -0.98
COL5A1-207ENST00000469093 IGKV1-39P01597 117 aa8.92□□□□□ -0.98
COL5A1-207ENST00000469093 IGKV1D-39P04432 117 aa8.92□□□□□ -0.98
COL5A1-207ENST00000469093 TAS2R46P59540 309 aa8.92□□□□□ -0.98
COL5A1-207ENST00000469093 DEFB131AP59861 70 aa8.92□□□□□ -0.98
COL5A1-207ENST00000469093 PRCDQ00LT1 54 aa8.92□□□□□ -0.98
COL5A1-207ENST00000469093 PHLDA2Q53GA4 152 aa8.92□□□□□ -0.98
COL5A1-207ENST00000469093 LEMD1Q68G75 181 aa8.92□□□□□ -0.98
COL5A1-207ENST00000469093 ZNF114Q8NC26 417 aa8.92□□□□□ -0.98
COL5A1-207ENST00000469093 C15orf40Q8WUR7 153 aa8.92□□□□□ -0.98
COL5A1-207ENST00000469093 PINX1Q96BK5 328 aaKnown RBP8.92□□□□□ -0.98
COL5A1-207ENST00000469093 SLIRPQ9GZT3 109 aaKnown RBP8.92□□□□□ -0.98
COL5A1-207ENST00000469093 FXYD6Q9H0Q3 95 aa8.92□□□□□ -0.98
COL5A1-207ENST00000469093 MS4A6AQ9H2W1 248 aa8.92□□□□□ -0.98
COL5A1-207ENST00000469093 FAM212BQ9NTI7 297 aaPredicted RBP8.92□□□□□ -0.98
COL5A1-207ENST00000469093 IGHV3-66A0A0C4DH42 116 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 IGLL5B9A064 214 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 DNASE2O00115 360 aaPredicted RBP8.91□□□□□ -0.98
COL5A1-207ENST00000469093 ST8SIA3O43173 380 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 EIF4EP06730 217 aaKnown RBP8.91□□□□□ -0.98
COL5A1-207ENST00000469093 GIG44P09565 113 aaPredicted RBP8.91□□□□□ -0.98
COL5A1-207ENST00000469093 HLA-DMAP28067 261 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 HRH1P35367 487 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 TAS2R20P59543 309 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 HSPE1P61604 102 aaKnown RBP8.91□□□□□ -0.98
COL5A1-207ENST00000469093 ERHP84090 104 aaKnown RBP8.91□□□□□ -0.98
COL5A1-207ENST00000469093 CNPY1Q3B7I2 92 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 H2BFWTQ7Z2G1 175 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 TBC1D26Q86UD7 250 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 FAM24BQ8N5W8 94 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 DUSP18Q8NEJ0 188 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 OR4A16Q8NH70 328 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 GINS3Q9BRX5 216 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 RABL2AQ9UBK7 228 aaPredicted RBP8.91□□□□□ -0.98
COL5A1-207ENST00000469093 EXTL2Q9UBQ6 330 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 RABL2BQ9UNT1 228 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 AGRNO00468 2067 aa8.91□□□□□ -0.98
COL5A1-207ENST00000469093 TRAV2A0A0B4J234 112 aa8.9□□□□□ -0.98
COL5A1-207ENST00000469093 CTDSP2O14595 271 aa8.9□□□□□ -0.98
COL5A1-207ENST00000469093 TMEM50AO95807 157 aa8.9□□□□□ -0.98
COL5A1-207ENST00000469093 RBMY1A1P0DJD3 496 aaKnown RBP8.9□□□□□ -0.98
COL5A1-207ENST00000469093 RBMY1CP0DJD4 496 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms