RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZDHHC16Q969W1 377 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 RPRMQ9NS64 109 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 FBLN5Q9UBX5 448 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 NAV3Q8IVL0 2385 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 C12orf77C9JDV5 145 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 ZNF207O43670 478 aaKnown RBP10.25□□□□□ -0.77
USP11-206ENST00000469080 IGLV3-1P01715 115 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 PF4V1P10720 104 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 RPL39P5Q59GN2 51 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 ZNF841Q6ZN19 808 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 COL25A1Q9BXS0 654 aaPredicted RBP10.25□□□□□ -0.77
USP11-206ENST00000469080 TMEM222Q9H0R3 208 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 HEYLQ9NQ87 328 aaPredicted RBP10.25□□□□□ -0.77
USP11-206ENST00000469080 PKD1L2Q7Z442 2459 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 SVEP1Q4LDE5 3571 aa10.25□□□□□ -0.77
USP11-206ENST00000469080 IGHV1-18A0A0C4DH31 117 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 FCN1O00602 326 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 ENSAO43768 121 aaKnown RBP10.24□□□□□ -0.77
USP11-206ENST00000469080 TYMSP04818 313 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 LIPFP07098 398 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 GPX1P07203 203 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 C22orf34Q6ZV56 151 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 H2BFWTQ7Z2G1 175 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 DRAM1Q8N682 238 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 TMEM252Q8N6L7 170 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 OR10P1Q8NGE3 313 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 SSC4DQ8WTU2 575 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 LHX4Q969G2 390 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 MRPL18Q9H0U6 180 aaKnown RBP10.24□□□□□ -0.77
USP11-206ENST00000469080 ARL2-SNX15V9GYD0 113 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 IGHV3-72A0A0B4J1Y9 119 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 TMEM30CPA0ZSE6 113 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 SPINT2O43291 252 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 LY6HO94772 140 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 PRDX2P32119 198 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 LINC00310P59036 64 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 TNFAIP6P98066 277 aaPredicted RBP10.24□□□□□ -0.77
USP11-206ENST00000469080 OR4A5Q8NH83 315 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 MSI2Q96DH6 328 aaKnown RBP10.24□□□□□ -0.77
USP11-206ENST00000469080 UQCRFS1P47985 274 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 LCN2P80188 198 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 INO80CQ6PI98 192 aaPredicted RBP10.24□□□□□ -0.77
USP11-206ENST00000469080 Q6ZRM9 215 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 ZNF439Q8NDP4 499 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 LINC01560Q8TB33 94 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 NEUROG1Q92886 237 aa10.24□□□□□ -0.77
USP11-206ENST00000469080 TSSC4Q9Y5U2 329 aaPredicted RBP10.24□□□□□ -0.77
USP11-206ENST00000469080 EGR1P18146 543 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 C5orf64Q2M2E5 130 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 ZNF474Q6S9Z5 364 aaPredicted RBP10.23□□□□□ -0.77
USP11-206ENST00000469080 MRGPRGQ86SM5 289 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 FAM216BQ8N7L0 139 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 Q8N976 141 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 VSIRQ9H7M9 311 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 DECR2Q9NUI1 292 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 SPINK4O60575 86 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 S1PR2O95136 353 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 CLDN14O95500 239 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 ZNF90Q03938 601 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 HSD52Q0P140 79 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 HLA-DRB5Q30154 266 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 Q6ZR03 302 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 SLC25A22Q9H936 323 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 NPVFQ9HCQ7 196 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 FAM231BA6NCW3 169 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 APOA2P02652 100 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 VDAC1P21796 283 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 CXXC4Q9H2H0 198 aa10.23□□□□□ -0.77
USP11-206ENST00000469080 ABCA2Q9BZC7 2435 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 C17orf98A8MV24 154 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 IGLL1P15814 213 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 ECI1P42126 302 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 COLCA1Q6ZS62 124 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 DEFB125Q8N687 156 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 OR4F17Q8NGA8 305 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 BLNKQ8WV28 456 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 P2RX4Q99571 388 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 SLC39A9Q9NUM3 307 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 PITX3O75364 302 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 GATA2P23769 480 aaPredicted RBP10.22□□□□□ -0.77
USP11-206ENST00000469080 ARL3P36405 182 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 IER3P46695 156 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 MEF2BQ02080 365 aaPredicted RBP10.22□□□□□ -0.77
USP11-206ENST00000469080 BVES-AS1Q5T3Y7 98 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 WDR31Q8NA23 367 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 IGFBPL1Q8WX77 278 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 PERPQ96FX8 193 aa10.22□□□□□ -0.77
USP11-206ENST00000469080 C7orf71A4D174 169 aa10.21□□□□□ -0.77
USP11-206ENST00000469080 USF1P22415 310 aaPredicted RBP10.21□□□□□ -0.77
USP11-206ENST00000469080 PSMB3P49720 205 aa10.21□□□□□ -0.77
USP11-206ENST00000469080 TMEM50AO95807 157 aa10.21□□□□□ -0.77
USP11-206ENST00000469080 MYOD1P15172 320 aa10.21□□□□□ -0.77
USP11-206ENST00000469080 RPL30P62888 115 aaKnown RBP10.21□□□□□ -0.77
USP11-206ENST00000469080 STPG3Q8N7X2 389 aa10.21□□□□□ -0.77
USP11-206ENST00000469080 SPSB4Q96A44 273 aa10.21□□□□□ -0.77
USP11-206ENST00000469080 CLCF1Q9UBD9 225 aa10.21□□□□□ -0.77
USP11-206ENST00000469080 CSMD1Q96PZ7 3565 aa10.21□□□□□ -0.78
USP11-206ENST00000469080 IGHV3-21A0A0B4J1V1 117 aa10.21□□□□□ -0.78
USP11-206ENST00000469080 MEF2CQ06413 473 aaPredicted RBP10.21□□□□□ -0.78
USP11-206ENST00000469080 MSMPQ1L6U9 139 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms