RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 RPL35AP18077 110 aaKnown RBP10.92□□□□□ -0.66
SDCCAG3-209ENST00000468963 ATF4P18848 351 aaPredicted RBP10.92□□□□□ -0.66
SDCCAG3-209ENST00000468963 ERHP84090 104 aaKnown RBP10.92□□□□□ -0.66
SDCCAG3-209ENST00000468963 DEFB135Q30KP9 77 aa10.92□□□□□ -0.66
SDCCAG3-209ENST00000468963 PVRIGQ6DKI7 326 aa10.92□□□□□ -0.66
SDCCAG3-209ENST00000468963 STPG3Q8N7X2 389 aa10.92□□□□□ -0.66
SDCCAG3-209ENST00000468963 ZNF486Q96H40 463 aaPredicted RBP10.92□□□□□ -0.66
SDCCAG3-209ENST00000468963 IGHV3-49A0A0A0MS15 119 aa10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 INS-IGF2F8WCM5 200 aa10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 YIF1AO95070 293 aa10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 PI3P19957 117 aa10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 CMC4P56277 68 aaPredicted RBP10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 ZNF124Q15973 351 aa10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 CTF1Q16619 201 aa10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 MZT2AQ6P582 158 aa10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 TOMM20LQ6UXN7 152 aa10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 APRG1Q8IVJ8 170 aa10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 OR52I2Q8NH67 350 aa10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 TP53RKQ96S44 253 aa10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 ABHD1Q96SE0 405 aa10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 NAA50Q9GZZ1 169 aaKnown RBP10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 MTFP1Q9UDX5 166 aa10.91□□□□□ -0.66
SDCCAG3-209ENST00000468963 CD3DP04234 171 aa10.9□□□□□ -0.66
SDCCAG3-209ENST00000468963 PIGPP57054 158 aa10.9□□□□□ -0.66
SDCCAG3-209ENST00000468963 LILRB2Q8N423 598 aa10.9□□□□□ -0.66
SDCCAG3-209ENST00000468963 LINC00476Q8WZB0 136 aa10.9□□□□□ -0.66
SDCCAG3-209ENST00000468963 PINX1Q96BK5 328 aaKnown RBP10.9□□□□□ -0.66
SDCCAG3-209ENST00000468963 IGHV3OR16-13A0A075B7E8 117 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 IGHV3-74A0A0B4J1X5 117 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 CXorf65A6NEN9 183 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 FAM25AB3EWG3 89 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 FAM25CB3EWG5 89 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 FAM25GB3EWG6 89 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 ST8SIA3O43173 380 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 GNG7O60262 68 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 TMEM50AO95807 157 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 APOHP02749 345 aaPredicted RBP10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 PGAM2P15259 253 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 ZNF182P17025 639 aaPredicted RBP10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 NPBWR1P48145 328 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 PMS2P11Q13670 270 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 SPINK9Q5DT21 86 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 RNASE12Q5GAN4 147 aaKnown RBP10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 RNASE10Q5GAN6 216 aaKnown RBP10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 CEMP1Q6PRD7 247 aaPredicted RBP10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 ARRDC1Q8N5I2 433 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 DUSP18Q8NEJ0 188 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 CSTL1Q9H114 145 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 VSIRQ9H7M9 311 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 DNAH6Q9C0G6 4158 aa10.89□□□□□ -0.67
SDCCAG3-209ENST00000468963 C3orf85A0A1B0GTC6 90 aa10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 GABARAPO95166 117 aa10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 CD74P04233 296 aa10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 RNASE2P10153 161 aaKnown RBP10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 TBPP20226 339 aa10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 SNCAP37840 140 aa10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 ETV6P41212 452 aa10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 TFPI2P48307 235 aa10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 SP6Q3SY56 376 aa10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 GBGT1Q8N5D6 347 aa10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 OR4D10Q8NGI6 311 aa10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 TERB2Q8NHR7 220 aa10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 ZFAND3Q9H8U3 227 aa10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 EXTL2Q9UBQ6 330 aa10.88□□□□□ -0.67
SDCCAG3-209ENST00000468963 IGKV3-7A0A075B6H7 116 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 NUPR2A6NF83 97 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 CD5P06127 495 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 SMIM18P0DKX4 95 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 UCP1P25874 307 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 MLANAQ16655 118 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 ZNF600Q6ZNG1 722 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 Q6ZRM9 215 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 TCF24Q7RTU0 167 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 TMEM229BQ8NBD8 167 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 ZFAND1Q8TCF1 268 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 ST8SIA2Q92186 375 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 AP3S1Q92572 193 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 GINS3Q9BRX5 216 aa10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 C6orf62Q9GZU0 229 aaPredicted RBP10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 MRPL36Q9P0J6 103 aaKnown RBP10.87□□□□□ -0.67
SDCCAG3-209ENST00000468963 A0A0G2JRQ6 117 aa10.86□□□□□ -0.67
SDCCAG3-209ENST00000468963 A0A1B0GU03 582 aa10.86□□□□□ -0.67
SDCCAG3-209ENST00000468963 MPTX1A8MV57 137 aa10.86□□□□□ -0.67
SDCCAG3-209ENST00000468963 DFFBO76075 338 aa10.86□□□□□ -0.67
SDCCAG3-209ENST00000468963 ATG12O94817 140 aa10.86□□□□□ -0.67
SDCCAG3-209ENST00000468963 IFNA17P01571 189 aa10.86□□□□□ -0.67
SDCCAG3-209ENST00000468963 PAFAH1B2P68402 229 aa10.86□□□□□ -0.67
SDCCAG3-209ENST00000468963 SLC35G3Q8N808 338 aa10.86□□□□□ -0.67
SDCCAG3-209ENST00000468963 C15orf40Q8WUR7 153 aa10.86□□□□□ -0.67
SDCCAG3-209ENST00000468963 MIXL1Q9H2W2 232 aa10.86□□□□□ -0.67
SDCCAG3-209ENST00000468963 FNDC4Q9H6D8 234 aaPredicted RBP10.86□□□□□ -0.67
SDCCAG3-209ENST00000468963 COPZ2Q9P299 210 aa10.86□□□□□ -0.67
SDCCAG3-209ENST00000468963 PUS1Q9Y606 427 aaKnown RBP eCLIP10.86□□□□□ -0.67
SDCCAG3-209ENST00000468963 LY6G6CO95867 125 aa10.85□□□□□ -0.67
SDCCAG3-209ENST00000468963 RPL5P46777 297 aaKnown RBP10.85□□□□□ -0.67
SDCCAG3-209ENST00000468963 AKR1C2P52895 323 aa10.85□□□□□ -0.67
SDCCAG3-209ENST00000468963 PPP5CP53041 499 aa10.85□□□□□ -0.67
SDCCAG3-209ENST00000468963 SUB1P53999 127 aaKnown RBP eCLIP10.85□□□□□ -0.67
SDCCAG3-209ENST00000468963 TAS2R19P59542 299 aa10.85□□□□□ -0.67
SDCCAG3-209ENST00000468963 TRIM16LQ309B1 348 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms