RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ABCA4P78363 2273 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 RNF213Q63HN8 5207 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 EVPLLA8MZ36 301 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 C3orf84H3BNL1 204 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 H3BSA7 217 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 M0QYV0 167 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 KCNK1O00180 336 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 KPNA3O00505 521 aaPredicted RBP2.29□□□□□ -2.04
LSM5-209ENST00000468872 DENRO43583 198 aaKnown RBP2.29□□□□□ -2.04
LSM5-209ENST00000468872 IFNA16P05015 189 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 ATP5G1P05496 136 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 FKBP1AP62942 108 aaKnown RBP2.29□□□□□ -2.04
LSM5-209ENST00000468872 OR2F1Q13607 317 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 C1DQ13901 141 aaKnown RBP2.29□□□□□ -2.04
LSM5-209ENST00000468872 LRRC75BQ2VPJ9 315 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 TRMT12Q53H54 448 aaKnown RBP2.29□□□□□ -2.04
LSM5-209ENST00000468872 MESTQ5EB52 335 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 SFXN4Q6P4A7 337 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 TMPPEQ6ZT21 453 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 KRTAP13-1Q8IUC0 172 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 ZFAND2AQ8N6M9 145 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 TMEM161BQ8NDZ6 487 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 OR10D3Q8NH80 312 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 EEF1AKMT1Q8WVE0 214 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 EBNA1BP2Q99848 306 aaKnown RBP2.29□□□□□ -2.04
LSM5-209ENST00000468872 MROQ9BYG7 248 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 OR51B6Q9H340 312 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 MRPL16Q9NX20 251 aaKnown RBP2.29□□□□□ -2.04
LSM5-209ENST00000468872 VPREB3Q9UKI3 123 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 WASHC3Q9Y3C0 194 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 CMYA5Q8N3K9 4069 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 KNTC1P50748 2209 aa2.29□□□□□ -2.04
LSM5-209ENST00000468872 DOCK1Q14185 1865 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 PLXNA4Q9HCM2 1894 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 HECTD4Q9Y4D8 3996 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 F5P12259 2224 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 TGIF2-C20orf24A0A0A6YYL0 155 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 STX10O60499 249 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 ZNF189O75820 626 aaPredicted RBP2.28□□□□□ -2.04
LSM5-209ENST00000468872 DCTN3O75935 186 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 REG1AP05451 166 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 FBP1P09467 338 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 REG1BP48304 166 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 PSMB3P49720 205 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 GZMMP51124 257 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 GLO1Q04760 184 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 C1orf195Q5TG92 126 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 COMMD7Q86VX2 200 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 TRAPPC5Q8IUR0 188 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 TMEM75Q8N9X5 138 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 OR10P1Q8NGE3 313 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 MFSD8Q8NHS3 518 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 ERMNQ8TAM6 284 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 TNFAIP8L1Q8WVP5 186 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 DGCR14Q96DF8 476 aaKnown RBP2.28□□□□□ -2.04
LSM5-209ENST00000468872 OR51I1Q9H343 314 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 UBQLN4Q9NRR5 601 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 LINC00527Q9UJ94 153 aa2.28□□□□□ -2.04
LSM5-209ENST00000468872 PKDREJQ9NTG1 2253 aa2.28□□□□□ -2.05
LSM5-209ENST00000468872 FSIP2Q5CZC0 6907 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 STAB2Q8WWQ8 2551 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 AKAP6Q13023 2319 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 IGSF23A1L1A6 192 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 G3V3Q6 166 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 ZNF73O43830 326 aaPredicted RBP2.27□□□□□ -2.05
LSM5-209ENST00000468872 FADS1O60427 444 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 AGTR1P30556 359 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 IDH3GP51553 393 aaPredicted RBP2.27□□□□□ -2.05
LSM5-209ENST00000468872 TCL1AP56279 114 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 H2BFSP57053 126 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 MAPK14Q16539 360 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 TNFAIP8L2Q6P589 184 aaPredicted RBP2.27□□□□□ -2.05
LSM5-209ENST00000468872 Q6ZRU5 148 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 TCF24Q7RTU0 167 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 TMEM86BQ8N661 226 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 OR5B17Q8NGF7 314 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 C16orf78Q8WTQ4 265 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 ZCCHC13Q8WW36 166 aaKnown RBP2.27□□□□□ -2.05
LSM5-209ENST00000468872 ASB17Q8WXJ9 295 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 GNB1LQ9BYB4 327 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 PARVAQ9NVD7 372 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 ESPL1Q14674 2120 aa2.27□□□□□ -2.05
LSM5-209ENST00000468872 ATAD5Q96QE3 1844 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 SMIM9A6NGZ8 99 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 C17orf98A8MV24 154 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 A8MWP6 167 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 ARL6IP5O75915 188 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 IL6P05231 212 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 LINC00614P0C842 121 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 ORM2P19652 201 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 CFL1P23528 166 aaKnown RBP2.26□□□□□ -2.05
LSM5-209ENST00000468872 FUSP35637 526 aaKnown RBP eCLIP2.26□□□□□ -2.05
LSM5-209ENST00000468872 NAA20P61599 178 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 VBP1P61758 197 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 ARF6P62330 175 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 SPOPLQ6IQ16 392 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 CCDC112Q8NEF3 446 aa2.26□□□□□ -2.05
LSM5-209ENST00000468872 OR2V1Q8NHB1 315 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms