RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 EFCAB9A8MZ26 197 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 FXYD1O00168 92 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 FFAR1O14842 300 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 VAMP5O95183 116 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 HLA-DQB1P01920 261 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 GUSBP08236 651 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 SLC25A16P16260 332 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 ZNF14P17017 642 aaPredicted RBP2.47□□□□□ -2.01
GPNMB-207ENST00000468723 FKBP2P26885 142 aaKnown RBP2.47□□□□□ -2.01
GPNMB-207ENST00000468723 PSMB9P28065 219 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 HLA-DMAP28067 261 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 RPS27P42677 84 aaKnown RBP2.47□□□□□ -2.01
GPNMB-207ENST00000468723 LGALS7P47929 136 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 NUDT2P50583 147 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 CMC4P56277 68 aaPredicted RBP2.47□□□□□ -2.01
GPNMB-207ENST00000468723 PSME3P61289 254 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 HBG1P69891 147 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 HBG2P69892 147 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 PSG4Q00888 419 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 TEX30Q5JUR7 227 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 FAM201AQ5SY85 155 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 Q6ZR03 302 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 NAA40Q86UY6 237 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 CALHM3Q86XJ0 350 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 ZNF101Q8IZC7 436 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 OR10G2Q8NGC3 310 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 ZNF420Q8TAQ5 688 aaPredicted RBP2.47□□□□□ -2.01
GPNMB-207ENST00000468723 SYNPRQ8TBG9 265 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 CCL17Q92583 94 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 Q96M85 177 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 SLC19A3Q9BZV2 496 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 OR2J1Q9GZK6 312 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 SLC25A31Q9H0C2 315 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 NSRP1Q9H0G5 558 aaKnown RBP2.47□□□□□ -2.01
GPNMB-207ENST00000468723 PARP11Q9NR21 331 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 TMEM38BQ9NVV0 291 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 RBM12B-AS1Q9P1G2 102 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 MED31Q9Y3C7 131 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 IER3IP1Q9Y5U9 82 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 FLNAP21333 2647 aaKnown RBP2.47□□□□□ -2.01
GPNMB-207ENST00000468723 TANC2Q9HCD6 1990 aa2.47□□□□□ -2.01
GPNMB-207ENST00000468723 PLCE1Q9P212 2302 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 A0A087WUU8 490 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 IGHV3-49A0A0A0MS15 119 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 MDFIC2A0A1B0GVS7 189 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 CENPBD1B2RD01 187 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 H3BP45 60 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 RPL36A-HNRNPH2H7BZ11 118 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 M0R233 179 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 UPK2O00526 184 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 CDC42EP2O14613 210 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 RBFOX2O43251 390 aaKnown RBP eCLIP2.46□□□□□ -2.02
GPNMB-207ENST00000468723 FGF16O43320 207 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 ATP8B1O43520 1251 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 ZNF207O43670 478 aaKnown RBP2.46□□□□□ -2.02
GPNMB-207ENST00000468723 ENTPD6O75354 484 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 CRTAPO75718 401 aaPredicted RBP2.46□□□□□ -2.02
GPNMB-207ENST00000468723 SCO1O75880 301 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 UBL3O95164 117 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 OR5F1O95221 314 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 CYB5R3P00387 301 aaPredicted RBP2.46□□□□□ -2.02
GPNMB-207ENST00000468723 IGHV1-46P01743 117 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 TFF1P04155 84 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 S100A6P06703 90 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 ASAH2BP0C7U1 165 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 PYCR1P32322 319 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 GLRXP35754 106 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 OPRK1P41145 380 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 GDI2P50395 445 aaKnown RBP2.46□□□□□ -2.02
GPNMB-207ENST00000468723 DLX6P56179 175 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 CLDN12P56749 244 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 RAB25P57735 213 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 GNGT1P63211 74 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 SELENOWP63302 87 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 ELF3P78545 371 aaPredicted RBP2.46□□□□□ -2.02
GPNMB-207ENST00000468723 TBC1D28Q2M2D7 210 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 SLC36A2Q495M3 483 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 MESTQ5EB52 335 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 CLEC12AQ5QGZ9 265 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 AP1ARQ63HQ0 302 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 LAMTOR1Q6IAA8 161 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 GLYATQ6IB77 296 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 OR2T2Q6IF00 324 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 SMARCD3Q6STE5 483 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 FAM231DQ6ZW35 169 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 PDZD9Q8IXQ8 264 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 SLC25A29Q8N8R3 303 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 DEFB108BQ8NET1 73 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 SLC26A10Q8NG04 563 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 OR2Z1Q8NG97 314 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 OR4K13Q8NH42 304 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 ORAOV1Q8WV07 137 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 C11orf40Q8WZ69 217 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 LZICQ8WZA0 190 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 CMBLQ96DG6 245 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 SLC25A44Q96H78 314 aaPredicted RBP2.46□□□□□ -2.02
GPNMB-207ENST00000468723 ERMAPQ96PL5 475 aaPredicted RBP2.46□□□□□ -2.02
GPNMB-207ENST00000468723 RBP7Q96R05 134 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 ZNF649Q9BS31 505 aa2.46□□□□□ -2.02
GPNMB-207ENST00000468723 FAAP24Q9BTP7 215 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms