RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 EBI3Q14213 229 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 FXYD3Q14802 87 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 PRSS8Q16651 343 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 C5orf64Q2M2E5 130 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 NMSQ5H8A3 153 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 C10orf55Q5SWW7 151 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 PPP1R27Q86WC6 154 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 MMD2Q8IY49 270 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 PUSL1Q8N0Z8 303 aaKnown RBP3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 FAM71E2Q8N5Q1 922 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 NPBQ8NG41 125 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 OR10W1Q8NGF6 305 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 OR4D5Q8NGN0 318 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 OR1L8Q8NGR8 309 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 OR4A5Q8NH83 315 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 GRPEL2Q8TAA5 225 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 VSTM2AQ8TAG5 236 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 THAP6Q8TBB0 222 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 TMEM167AQ8TBQ9 72 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 PPP1R1CQ8WVI7 109 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 DCUN1D4Q92564 292 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 TAF15Q92804 592 aaKnown RBP eCLIP3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 TMEM18Q96B42 140 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 RNF183Q96D59 192 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 RBM14Q96PK6 669 aaKnown RBP3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 NEURL2Q9BR09 285 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 FAM103A1Q9BTL3 118 aaKnown RBP3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 NMES1Q9C002 83 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 COMMD5Q9GZQ3 224 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 RBKSQ9H477 322 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 ZNF430Q9H8G1 570 aaPredicted RBP3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 PLSCR3Q9NRY6 295 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 FAM212BQ9NTI7 297 aaPredicted RBP3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 FKBP11Q9NYL4 201 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 BET1LQ9NYM9 111 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 PSENENQ9NZ42 101 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 OR5AC2Q9NZP5 309 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 LINC00527Q9UJ94 153 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 PRNDQ9UKY0 176 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 TCF19Q9Y242 345 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 SIGLEC9Q9Y336 463 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 WSB1Q9Y6I7 421 aa3.22□□□□□ -1.89
TMEM39A-204ENST00000468545 CCDC168Q8NDH2 2452 aa3.21□□□□□ -1.89
TMEM39A-204ENST00000468545 CSMD2Q7Z408 3487 aa3.21□□□□□ -1.89
TMEM39A-204ENST00000468545 ABCA1O95477 2261 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 TRAV14DV4A0A0A6YYC5 116 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 RPS10-NUDT3A0A1W2PQS6 291 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 C15orf61A6NNL5 157 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 E7EUB6 86 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 H3BP45 60 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 BOLA2-SMG1P6H3BVE0 249 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 SYNGR2O43760 224 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 PITX3O75364 302 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 MED6O75586 246 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 MPC2O95563 127 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 IFNA10P01566 189 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 P0C879 139 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 OR13C7P0DN81 318 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 SLC25A6P12236 298 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 PVALBP20472 110 aaPredicted RBP3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 EIF2B2P49770 351 aaKnown RBP3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 CAV2P51636 162 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 DYNLT3P51808 116 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 SPCS3P61009 180 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 RPL23AP62750 156 aaKnown RBP3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 BLCAPP62952 87 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 CX3CL1P78423 397 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 ERHP84090 104 aaKnown RBP3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 FGL1Q08830 312 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 POU2AF1Q16633 256 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 MRGPRG-AS1Q2M3A8 158 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 ZFP69Q49AA0 526 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 SPANXN5Q5MJ07 72 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 SLC25A24Q6NUK1 477 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 C19orf35Q6ZS72 473 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 C9orf139Q6ZV77 190 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 ZNF546Q86UE3 836 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 Q8N6K4 173 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 Q8N9W7 124 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 OR5T1Q8NG75 326 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 OR8H1Q8NGG4 311 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 OR5R1Q8NH85 324 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 DTD1Q8TEA8 209 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 ZNF418Q8TF45 676 aaPredicted RBP3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 SSMEM1Q8WWF3 244 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 URB1-AS1Q96HZ7 61 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 HSPB9Q9BQS6 159 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 RNF126Q9BV68 326 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 SMIM3Q9BZL3 60 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 NPFFR1Q9GZQ6 430 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 HIPK2Q9H2X6 1198 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 PLEKHA3Q9HB20 300 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 PARP11Q9NR21 331 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 ZNF355PQ9NSJ1 428 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 MBD2Q9UBB5 411 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 HSPB7Q9UBY9 170 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 PITPNC1Q9UKF7 332 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 MOB4Q9Y3A3 225 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 POMT1Q9Y6A1 747 aa3.21□□□□□ -1.9
TMEM39A-204ENST00000468545 ITPR2Q14571 2701 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms