RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 HIST1H1BP16401 226 aaKnown RBP6.64□□□□□ -1.35
BRCA1-208ENST00000468300 EDN2P20800 178 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 S100A2P29034 98 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 TMEM14BQ9NUH8 114 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 PLA2G2EQ9NZK7 142 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 PITPNC1Q9UKF7 332 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 ANKRD17O75179 2603 aaKnown RBP6.64□□□□□ -1.35
BRCA1-208ENST00000468300 POLQO75417 2590 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 ZANQ9Y493 2812 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 PIGBOS1A0A0B4J2F0 54 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 SYNGR2O43760 224 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 CRYGBP07316 175 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 H2AFB1P0C5Y9 115 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 OR2B8PP59922 312 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 CLLU1Q5K131 121 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 H2BFWTQ7Z2G1 175 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 INO80EQ8NBZ0 244 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-208ENST00000468300 NKX6-2Q9C056 277 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-208ENST00000468300 A0A1B0GW64 132 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 CGB1A6NKQ9 187 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 PMS2P5A8MQ11 134 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 FAM90A26D6RGX4 464 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 GNG7O60262 68 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 GPR137BO60478 399 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 SAA1P0DJI8 122 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-208ENST00000468300 DVL1P1P54792 670 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-208ENST00000468300 EWSR1Q01844 656 aaKnown RBP eCLIP6.63□□□□□ -1.35
BRCA1-208ENST00000468300 ARL16Q0P5N6 197 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 TPTE2P1Q5T6R2 138 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 PDZD9Q8IXQ8 264 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 TMEM252Q8N6L7 170 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 TMEM170AQ8WVE7 144 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-208ENST00000468300 IGHV3-72A0A0B4J1Y9 119 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 RPS10-NUDT3A0A1W2PQS6 291 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 E7EUB6 86 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 CNTFRP26992 372 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 OR5I1Q13606 314 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 CLEC12BQ2HXU8 276 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 DEFB113Q30KQ7 82 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 BSXQ3C1V8 233 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 ZNF429Q86V71 674 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 PDPNQ86YL7 162 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 UBAC2Q8NBM4 344 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 SMIM8Q96KF7 97 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 TPSG1Q9NRR2 321 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 FBXL17Q9UF56 701 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 FOXA2Q9Y261 457 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-208ENST00000468300 CUBNO60494 3623 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 C15orf61A6NNL5 157 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 FOXH1O75593 365 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 IAPPP10997 89 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 VDAC2P45880 294 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-208ENST00000468300 SSBP2P81877 361 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-208ENST00000468300 TNXAQ16473 311 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 TMEM41BQ5BJD5 291 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 SPINK9Q5DT21 86 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 CT83Q5H943 113 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 PYY3Q5JQD4 70 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 STPG2Q8N412 459 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 PIP4P2Q8N4L2 257 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 OSR1Q8TAX0 266 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-208ENST00000468300 OR4C12Q96R67 309 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 SNHG12Q9BXW3 62 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 UBQLN2Q9UHD9 624 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 WSB1Q9Y6I7 421 aa6.63□□□□□ -1.35
BRCA1-208ENST00000468300 UPK2O00526 184 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 TOX4O94842 621 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 TIRAPP58753 221 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 DSCR9P59020 149 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 RPL7L1Q6DKI1 246 aaKnown RBP6.62□□□□□ -1.35
BRCA1-208ENST00000468300 OR52E5Q8NH55 327 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 LHX4Q969G2 390 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 MBD6Q96DN6 1003 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 BEX4Q9NWD9 120 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-208ENST00000468300 BET1LQ9NYM9 111 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 WASHC3Q9Y3C0 194 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 DOPEY2Q9Y3R5 2298 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 SPG11Q96JI7 2443 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 CENPVL3A0A0U1RRI6 287 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 H3BP45 60 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 TAS2R30P59541 319 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 RTL8BQ17RB0 113 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 TMEM14EPQ6UXP3 125 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 LRRC75A-AS1Q8N1F1 130 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 OR4C13Q8NGP0 309 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 RAB40CQ96S21 281 aa6.62□□□□□ -1.35
BRCA1-208ENST00000468300 A0A1W2PRD5 423 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 A0A1W2PRF3 423 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 A0A1W2PRM7 423 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 SEC14L6B5MCN3 397 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 F6UZH7 168 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 KBTBD11O94819 623 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 AVPP01185 164 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 GAPDHP04406 335 aaKnown RBP6.61□□□□□ -1.35
BRCA1-208ENST00000468300 CKS1BP61024 79 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 FLYWCH2Q96CP2 140 aaKnown RBP6.61□□□□□ -1.35
BRCA1-208ENST00000468300 MCRIP2Q9BUT9 160 aaKnown RBP6.61□□□□□ -1.35
BRCA1-208ENST00000468300 DPM3Q9P2X0 92 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 METTL1Q9UBP6 276 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms