RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 I3L2K1 104 aa15.3■□□□□ 0.04
NPHP4-206ENST00000468253 LGALS9O00182 355 aa15.3■□□□□ 0.04
NPHP4-206ENST00000468253 OR2C1O95371 312 aa15.3■□□□□ 0.04
NPHP4-206ENST00000468253 HLA-AP01891 365 aaKnown RBP15.3■□□□□ 0.04
NPHP4-206ENST00000468253 OR4E1P0C645 316 aa15.3■□□□□ 0.04
NPHP4-206ENST00000468253 ARL3P36405 182 aa15.3■□□□□ 0.04
NPHP4-206ENST00000468253 BSXQ3C1V8 233 aa15.3■□□□□ 0.04
NPHP4-206ENST00000468253 FAM106AQ4KMX7 169 aa15.3■□□□□ 0.04
NPHP4-206ENST00000468253 SPSB3Q6PJ21 355 aa15.3■□□□□ 0.04
NPHP4-206ENST00000468253 C21orf62Q9NYP8 219 aa15.3■□□□□ 0.04
NPHP4-206ENST00000468253 PEMTQ9UBM1 199 aa15.3■□□□□ 0.04
NPHP4-206ENST00000468253 PPP5D1E7EU14 171 aa15.29■□□□□ 0.04
NPHP4-206ENST00000468253 CORTO00230 105 aa15.29■□□□□ 0.04
NPHP4-206ENST00000468253 PITX3O75364 302 aa15.29■□□□□ 0.04
NPHP4-206ENST00000468253 SAP30O75446 220 aa15.29■□□□□ 0.04
NPHP4-206ENST00000468253 IGHV3-23P01764 117 aa15.29■□□□□ 0.04
NPHP4-206ENST00000468253 TCRBP04435 133 aa15.29■□□□□ 0.04
NPHP4-206ENST00000468253 HTR2BP41595 481 aa15.29■□□□□ 0.04
NPHP4-206ENST00000468253 HOXA1P49639 335 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-206ENST00000468253 SPINK9Q5DT21 86 aa15.29■□□□□ 0.04
NPHP4-206ENST00000468253 MZT2BQ6NZ67 158 aa15.29■□□□□ 0.04
NPHP4-206ENST00000468253 BSCL2Q96G97 398 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-206ENST00000468253 AURKAIP1Q9NWT8 199 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-206ENST00000468253 HSPB7Q9UBY9 170 aa15.29■□□□□ 0.04
NPHP4-206ENST00000468253 UPK1BO75841 260 aa15.28■□□□□ 0.04
NPHP4-206ENST00000468253 RNASE2P10153 161 aaKnown RBP15.28■□□□□ 0.04
NPHP4-206ENST00000468253 MFAP4P55083 255 aa15.28■□□□□ 0.04
NPHP4-206ENST00000468253 ATP5IP56385 69 aaPredicted RBP15.28■□□□□ 0.04
NPHP4-206ENST00000468253 TNFRSF9Q07011 255 aa15.28■□□□□ 0.04
NPHP4-206ENST00000468253 DHRS2Q13268 280 aa15.28■□□□□ 0.04
NPHP4-206ENST00000468253 ASAH1Q13510 395 aa15.28■□□□□ 0.04
NPHP4-206ENST00000468253 PLET1Q6UQ28 207 aa15.28■□□□□ 0.04
NPHP4-206ENST00000468253 LYG2Q86SG7 212 aa15.28■□□□□ 0.04
NPHP4-206ENST00000468253 S4R3C0 116 aa15.28■□□□□ 0.04
NPHP4-206ENST00000468253 CSN3P07498 182 aa15.27■□□□□ 0.04
NPHP4-206ENST00000468253 NOXA1Q86UR1 476 aa15.27■□□□□ 0.04
NPHP4-206ENST00000468253 COQ8AQ8NI60 647 aa15.27■□□□□ 0.04
NPHP4-206ENST00000468253 MISP3Q96FF7 219 aa15.27■□□□□ 0.04
NPHP4-206ENST00000468253 HIPK2Q9H2X6 1198 aa15.27■□□□□ 0.04
NPHP4-206ENST00000468253 HEYLQ9NQ87 328 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-206ENST00000468253 CEBPZOSA8MTT3 80 aa15.26■□□□□ 0.03
NPHP4-206ENST00000468253 FAM90A26D6RGX4 464 aa15.26■□□□□ 0.03
NPHP4-206ENST00000468253 TGOLN2O43493 480 aa15.26■□□□□ 0.03
NPHP4-206ENST00000468253 MT-CO2P00403 227 aa15.26■□□□□ 0.03
NPHP4-206ENST00000468253 IGLV1-51P01701 117 aa15.26■□□□□ 0.03
NPHP4-206ENST00000468253 PRB2P02812 416 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-206ENST00000468253 ANXA7P20073 488 aaKnown RBP15.26■□□□□ 0.03
NPHP4-206ENST00000468253 GPR183P32249 361 aa15.26■□□□□ 0.03
NPHP4-206ENST00000468253 C4orf46Q504U0 113 aa15.26■□□□□ 0.03
NPHP4-206ENST00000468253 C2orf83Q53S99 150 aa15.26■□□□□ 0.03
NPHP4-206ENST00000468253 TBC1D24Q9ULP9 559 aa15.26■□□□□ 0.03
NPHP4-206ENST00000468253 U3KQ87 197 aa15.26■□□□□ 0.03
NPHP4-206ENST00000468253 FAM240BA0A1B0GVZ2 78 aa15.25■□□□□ 0.03
NPHP4-206ENST00000468253 F8W735 103 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-206ENST00000468253 CTSGP08311 255 aa15.25■□□□□ 0.03
NPHP4-206ENST00000468253 OR1S1Q8NH92 325 aa15.25■□□□□ 0.03
NPHP4-206ENST00000468253 MITD1Q8WV92 249 aa15.25■□□□□ 0.03
NPHP4-206ENST00000468253 ZNF436Q9C0F3 470 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-206ENST00000468253 C20orf85Q9H1P6 137 aa15.25■□□□□ 0.03
NPHP4-206ENST00000468253 HOXB5P09067 269 aa15.24■□□□□ 0.03
NPHP4-206ENST00000468253 NPBWR1P48145 328 aa15.24■□□□□ 0.03
NPHP4-206ENST00000468253 ELLP55199 621 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-206ENST00000468253 GGNBP1Q5YKI7 109 aa15.24■□□□□ 0.03
NPHP4-206ENST00000468253 DUSP18Q8NEJ0 188 aa15.24■□□□□ 0.03
NPHP4-206ENST00000468253 RNASEH2CQ8TDP1 164 aaKnown RBP15.24■□□□□ 0.03
NPHP4-206ENST00000468253 PALMDQ9NP74 551 aa15.24■□□□□ 0.03
NPHP4-206ENST00000468253 ZNF256Q9Y2P7 627 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-206ENST00000468253 SORL1Q92673 2214 aa15.24■□□□□ 0.03
NPHP4-206ENST00000468253 IGHV3-21A0A0B4J1V1 117 aa15.23■□□□□ 0.03
NPHP4-206ENST00000468253 WI2-2373I1.2A0A1W2PRP0 233 aa15.23■□□□□ 0.03
NPHP4-206ENST00000468253 OR2T8A6NH00 312 aa15.23■□□□□ 0.03
NPHP4-206ENST00000468253 MED6O75586 246 aa15.23■□□□□ 0.03
NPHP4-206ENST00000468253 IFNA21P01568 189 aa15.23■□□□□ 0.03
NPHP4-206ENST00000468253 DCTN2Q13561 401 aaKnown RBP15.23■□□□□ 0.03
NPHP4-206ENST00000468253 Q56UQ5 140 aa15.23■□□□□ 0.03
NPHP4-206ENST00000468253 OR2K2Q8NGT1 345 aa15.23■□□□□ 0.03
NPHP4-206ENST00000468253 PRKDCP78527 4128 aaKnown RBP15.23■□□□□ 0.03
NPHP4-206ENST00000468253 A8MWP6 167 aa15.22■□□□□ 0.03
NPHP4-206ENST00000468253 K7EIL1 84 aa15.22■□□□□ 0.03
NPHP4-206ENST00000468253 NDUFA4O00483 81 aa15.22■□□□□ 0.03
NPHP4-206ENST00000468253 NUPL2O15504 423 aaKnown RBP15.22■□□□□ 0.03
NPHP4-206ENST00000468253 LY86O95711 162 aa15.22■□□□□ 0.03
NPHP4-206ENST00000468253 H2AFB2P0C5Z0 115 aa15.22■□□□□ 0.03
NPHP4-206ENST00000468253 ADMP35318 185 aa15.22■□□□□ 0.03
NPHP4-206ENST00000468253 IFITM3Q01628 133 aa15.22■□□□□ 0.03
NPHP4-206ENST00000468253 SLC24A4Q8NFF2 622 aa15.22■□□□□ 0.03
NPHP4-206ENST00000468253 DTD1Q8TEA8 209 aa15.22■□□□□ 0.03
NPHP4-206ENST00000468253 MARC2Q969Z3 335 aa15.22■□□□□ 0.03
NPHP4-206ENST00000468253 PINX1Q96BK5 328 aaKnown RBP15.22■□□□□ 0.03
NPHP4-206ENST00000468253 CHRDL1Q9BU40 450 aa15.22■□□□□ 0.03
NPHP4-206ENST00000468253 RBKSQ9H477 322 aa15.22■□□□□ 0.03
NPHP4-206ENST00000468253 TECRQ9NZ01 308 aaKnown RBP15.22■□□□□ 0.03
NPHP4-206ENST00000468253 RPS10-NUDT3A0A1W2PQS6 291 aa15.21■□□□□ 0.03
NPHP4-206ENST00000468253 ZNF320A2RRD8 509 aa15.21■□□□□ 0.03
NPHP4-206ENST00000468253 C2orf70A6NJV1 201 aa15.21■□□□□ 0.03
NPHP4-206ENST00000468253 RELQ04864 619 aaPredicted RBP15.21■□□□□ 0.03
NPHP4-206ENST00000468253 ADAMTSL5Q6ZMM2 481 aa15.21■□□□□ 0.03
NPHP4-206ENST00000468253 MRAPQ8TCY5 172 aa15.21■□□□□ 0.03
NPHP4-206ENST00000468253 NUDT15Q9NV35 164 aa15.21■□□□□ 0.03
NPHP4-206ENST00000468253 UFC1Q9Y3C8 167 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms