RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TFPI2P48307 235 aa18.06■□□□□ 0.48
PTCH1-210ENST00000468211 PINX1Q96BK5 328 aaKnown RBP18.06■□□□□ 0.48
PTCH1-210ENST00000468211 GALNT14Q96FL9 552 aa18.06■□□□□ 0.48
PTCH1-210ENST00000468211 TXN2Q99757 166 aa18.06■□□□□ 0.48
PTCH1-210ENST00000468211 KLK11Q9UBX7 282 aa18.06■□□□□ 0.48
PTCH1-210ENST00000468211 IGKV3-7A0A075B6H7 116 aa18.05■□□□□ 0.48
PTCH1-210ENST00000468211 FAM90A2PQ658T7 463 aa18.05■□□□□ 0.48
PTCH1-210ENST00000468211 LHFPL1Q86WI0 220 aa18.05■□□□□ 0.48
PTCH1-210ENST00000468211 TP53RKQ96S44 253 aa18.05■□□□□ 0.48
PTCH1-210ENST00000468211 NAA50Q9GZZ1 169 aaKnown RBP18.05■□□□□ 0.48
PTCH1-210ENST00000468211 P0C879 139 aa18.04■□□□□ 0.48
PTCH1-210ENST00000468211 A0A0B4J293 547 aa18.03■□□□□ 0.48
PTCH1-210ENST00000468211 GNG7O60262 68 aa18.03■□□□□ 0.48
PTCH1-210ENST00000468211 RORCP51449 518 aa18.03■□□□□ 0.48
PTCH1-210ENST00000468211 RND3P61587 244 aa18.03■□□□□ 0.48
PTCH1-210ENST00000468211 LILRB2Q8N423 598 aa18.03■□□□□ 0.48
PTCH1-210ENST00000468211 GBGT1Q8N5D6 347 aa18.03■□□□□ 0.48
PTCH1-210ENST00000468211 OR52I2Q8NH67 350 aa18.03■□□□□ 0.48
PTCH1-210ENST00000468211 TRAV14DV4A0A0A6YYC5 116 aa18.02■□□□□ 0.48
PTCH1-210ENST00000468211 FAM25AB3EWG3 89 aa18.02■□□□□ 0.48
PTCH1-210ENST00000468211 FAM25CB3EWG5 89 aa18.02■□□□□ 0.48
PTCH1-210ENST00000468211 FAM25GB3EWG6 89 aa18.02■□□□□ 0.48
PTCH1-210ENST00000468211 APOHP02749 345 aaPredicted RBP18.02■□□□□ 0.48
PTCH1-210ENST00000468211 CD3DP04234 171 aa18.02■□□□□ 0.48
PTCH1-210ENST00000468211 PGAM2P15259 253 aa18.02■□□□□ 0.48
PTCH1-210ENST00000468211 PIGPP57054 158 aa18.02■□□□□ 0.48
PTCH1-210ENST00000468211 ERHP84090 104 aaKnown RBP18.02■□□□□ 0.48
PTCH1-210ENST00000468211 CEMP1Q6PRD7 247 aaPredicted RBP18.02■□□□□ 0.48
PTCH1-210ENST00000468211 TOMM20LQ6UXN7 152 aa18.02■□□□□ 0.48
PTCH1-210ENST00000468211 NUPR2A6NF83 97 aa18.01■□□□□ 0.47
PTCH1-210ENST00000468211 LY6G6CO95867 125 aa18.01■□□□□ 0.47
PTCH1-210ENST00000468211 RNASE10Q5GAN6 216 aaKnown RBP18.01■□□□□ 0.47
PTCH1-210ENST00000468211 OR4D10Q8NGI6 311 aa18.01■□□□□ 0.47
PTCH1-210ENST00000468211 ST8SIA2Q92186 375 aa18.01■□□□□ 0.47
PTCH1-210ENST00000468211 ST8SIA3O43173 380 aa18■□□□□ 0.47
PTCH1-210ENST00000468211 CTF1Q16619 201 aa18■□□□□ 0.47
PTCH1-210ENST00000468211 SP6Q3SY56 376 aa18■□□□□ 0.47
PTCH1-210ENST00000468211 TCF24Q7RTU0 167 aa18■□□□□ 0.47
PTCH1-210ENST00000468211 ZNF486Q96H40 463 aaPredicted RBP18■□□□□ 0.47
PTCH1-210ENST00000468211 ABHD1Q96SE0 405 aa18■□□□□ 0.47
PTCH1-210ENST00000468211 ZFAND3Q9H8U3 227 aa18■□□□□ 0.47
PTCH1-210ENST00000468211 KMT2AQ03164 3969 aa17.99■□□□□ 0.47
PTCH1-210ENST00000468211 PPP5CP53041 499 aa17.99■□□□□ 0.47
PTCH1-210ENST00000468211 PVRIGQ6DKI7 326 aa17.99■□□□□ 0.47
PTCH1-210ENST00000468211 CSTL1Q9H114 145 aa17.99■□□□□ 0.47
PTCH1-210ENST00000468211 VSIRQ9H7M9 311 aa17.99■□□□□ 0.47
PTCH1-210ENST00000468211 MRPL36Q9P0J6 103 aaKnown RBP17.99■□□□□ 0.47
PTCH1-210ENST00000468211 EXTL2Q9UBQ6 330 aa17.99■□□□□ 0.47
PTCH1-210ENST00000468211 MTFP1Q9UDX5 166 aa17.99■□□□□ 0.47
PTCH1-210ENST00000468211 IGHV3-66A0A0C4DH42 116 aa17.98■□□□□ 0.47
PTCH1-210ENST00000468211 A0A0G2JRQ6 117 aa17.98■□□□□ 0.47
PTCH1-210ENST00000468211 C3orf85A0A1B0GTC6 90 aa17.98■□□□□ 0.47
PTCH1-210ENST00000468211 RNASE2P10153 161 aaKnown RBP17.98■□□□□ 0.47
PTCH1-210ENST00000468211 ATF4P18848 351 aaPredicted RBP17.98■□□□□ 0.47
PTCH1-210ENST00000468211 ETV6P41212 452 aa17.98■□□□□ 0.47
PTCH1-210ENST00000468211 AKR1C2P52895 323 aa17.98■□□□□ 0.47
PTCH1-210ENST00000468211 MZT2AQ6P582 158 aa17.98■□□□□ 0.47
PTCH1-210ENST00000468211 ARRDC1Q8N5I2 433 aa17.98■□□□□ 0.47
PTCH1-210ENST00000468211 SLC35G3Q8N808 338 aa17.98■□□□□ 0.47
PTCH1-210ENST00000468211 DUSP18Q8NEJ0 188 aa17.98■□□□□ 0.47
PTCH1-210ENST00000468211 PUS1Q9Y606 427 aaKnown RBP eCLIP17.98■□□□□ 0.47
PTCH1-210ENST00000468211 AGRNO00468 2067 aa17.97■□□□□ 0.47
PTCH1-210ENST00000468211 A0A1B0GU03 582 aa17.97■□□□□ 0.47
PTCH1-210ENST00000468211 INS-IGF2F8WCM5 200 aa17.97■□□□□ 0.47
PTCH1-210ENST00000468211 TMEM50AO95807 157 aa17.97■□□□□ 0.47
PTCH1-210ENST00000468211 SMIM18P0DKX4 95 aa17.97■□□□□ 0.47
PTCH1-210ENST00000468211 SNCAP37840 140 aa17.97■□□□□ 0.47
PTCH1-210ENST00000468211 MLANAQ16655 118 aa17.97■□□□□ 0.47
PTCH1-210ENST00000468211 GINS3Q9BRX5 216 aa17.97■□□□□ 0.47
PTCH1-210ENST00000468211 C6orf62Q9GZU0 229 aaPredicted RBP17.97■□□□□ 0.47
PTCH1-210ENST00000468211 FRAS1Q86XX4 4008 aa17.97■□□□□ 0.47
PTCH1-210ENST00000468211 MPTX1A8MV57 137 aa17.96■□□□□ 0.47
PTCH1-210ENST00000468211 DFFBO76075 338 aa17.96■□□□□ 0.47
PTCH1-210ENST00000468211 GABARAPO95166 117 aa17.96■□□□□ 0.47
PTCH1-210ENST00000468211 IFNA17P01571 189 aa17.96■□□□□ 0.47
PTCH1-210ENST00000468211 ZNF182P17025 639 aaPredicted RBP17.96■□□□□ 0.47
PTCH1-210ENST00000468211 NPBWR1P48145 328 aa17.96■□□□□ 0.47
PTCH1-210ENST00000468211 CMC4P56277 68 aaPredicted RBP17.96■□□□□ 0.47
PTCH1-210ENST00000468211 ZNF600Q6ZNG1 722 aa17.96■□□□□ 0.47
PTCH1-210ENST00000468211 FAM24BQ8N5W8 94 aa17.96■□□□□ 0.47
PTCH1-210ENST00000468211 OR13C8Q8NGS7 320 aa17.96■□□□□ 0.47
PTCH1-210ENST00000468211 FNDC4Q9H6D8 234 aaPredicted RBP17.96■□□□□ 0.47
PTCH1-210ENST00000468211 Q6ZRM9 215 aa17.95■□□□□ 0.46
PTCH1-210ENST00000468211 MS4A6AQ9H2W1 248 aa17.95■□□□□ 0.46
PTCH1-210ENST00000468211 MIXL1Q9H2W2 232 aa17.95■□□□□ 0.46
PTCH1-210ENST00000468211 CD74P04233 296 aa17.94■□□□□ 0.46
PTCH1-210ENST00000468211 TBPP20226 339 aa17.94■□□□□ 0.46
PTCH1-210ENST00000468211 UCP1P25874 307 aa17.94■□□□□ 0.46
PTCH1-210ENST00000468211 TRIM16LQ309B1 348 aa17.94■□□□□ 0.46
PTCH1-210ENST00000468211 SCGB2B2Q4G0G5 96 aa17.94■□□□□ 0.46
PTCH1-210ENST00000468211 TERB2Q8NHR7 220 aa17.94■□□□□ 0.46
PTCH1-210ENST00000468211 MARCH1Q8TCQ1 289 aa17.94■□□□□ 0.46
PTCH1-210ENST00000468211 AP3S1Q92572 193 aa17.94■□□□□ 0.46
PTCH1-210ENST00000468211 COPZ2Q9P299 210 aa17.94■□□□□ 0.46
PTCH1-210ENST00000468211 HOXA1P49639 335 aaPredicted RBP17.93■□□□□ 0.46
PTCH1-210ENST00000468211 GPR107Q5VW38 600 aa17.93■□□□□ 0.46
PTCH1-210ENST00000468211 LEMD1Q68G75 181 aa17.93■□□□□ 0.46
PTCH1-210ENST00000468211 TMEM217Q8N7C4 229 aa17.93■□□□□ 0.46
PTCH1-210ENST00000468211 TMEM229BQ8NBD8 167 aa17.93■□□□□ 0.46
PTCH1-210ENST00000468211 PHLDA1Q8WV24 401 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms