RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 RNASEH2CQ8TDP1 164 aaKnown RBP16.31■□□□□ 0.2
TMEM53-207ENST00000468117 ARPC1AQ92747 370 aa16.31■□□□□ 0.2
TMEM53-207ENST00000468117 MGST2Q99735 147 aa16.31■□□□□ 0.2
TMEM53-207ENST00000468117 FNDC4Q9H6D8 234 aaPredicted RBP16.31■□□□□ 0.2
TMEM53-207ENST00000468117 RPRMQ9NS64 109 aa16.31■□□□□ 0.2
TMEM53-207ENST00000468117 LSM4Q9Y4Z0 139 aaKnown RBP16.31■□□□□ 0.2
TMEM53-207ENST00000468117 MPDU1O75352 247 aa16.31■□□□□ 0.2
TMEM53-207ENST00000468117 ACSM6Q6P461 480 aa16.31■□□□□ 0.2
TMEM53-207ENST00000468117 TEPPQ6URK8 271 aa16.31■□□□□ 0.2
TMEM53-207ENST00000468117 RASL11BQ9BPW5 248 aa16.31■□□□□ 0.2
TMEM53-207ENST00000468117 F11RQ9Y624 299 aaKnown RBP16.31■□□□□ 0.2
TMEM53-207ENST00000468117 FNDC10F2Z333 226 aa16.3■□□□□ 0.2
TMEM53-207ENST00000468117 C17orf112F2Z3M2 114 aa16.3■□□□□ 0.2
TMEM53-207ENST00000468117 IGHV3-48P01763 117 aa16.3■□□□□ 0.2
TMEM53-207ENST00000468117 AANATQ16613 207 aa16.3■□□□□ 0.2
TMEM53-207ENST00000468117 CYB5R2Q6BCY4 276 aa16.3■□□□□ 0.2
TMEM53-207ENST00000468117 SLC16A13Q7RTY0 426 aa16.3■□□□□ 0.2
TMEM53-207ENST00000468117 OR1P1Q8NH06 330 aa16.3■□□□□ 0.2
TMEM53-207ENST00000468117 C22orf15Q8WYQ4 148 aa16.3■□□□□ 0.2
TMEM53-207ENST00000468117 MISP3Q96FF7 219 aa16.3■□□□□ 0.2
TMEM53-207ENST00000468117 SRSF8Q9BRL6 282 aaKnown RBP16.3■□□□□ 0.2
TMEM53-207ENST00000468117 SLC25A33Q9BSK2 321 aa16.3■□□□□ 0.2
TMEM53-207ENST00000468117 IGHV7-81A0A0B4J1V7 117 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 A0A1B0GV50 99 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 HLA-DRB1P01911 266 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 S100A1P23297 94 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 OR2T6Q8NHC8 308 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 LYPD6BQ8NI32 183 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 MARC2Q969Z3 335 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 HSPB9Q9BQS6 159 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 DMRT1Q9Y5R6 373 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 MDFIC2A0A1B0GVS7 189 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 H3BUX3 64 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 SMAD7O15105 426 aaKnown RBP16.29■□□□□ 0.2
TMEM53-207ENST00000468117 GPX4P36969 197 aaPredicted RBP16.29■□□□□ 0.2
TMEM53-207ENST00000468117 FFAR4Q5NUL3 377 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 PVRIGQ6DKI7 326 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 BCL6BQ8N143 479 aaPredicted RBP16.29■□□□□ 0.2
TMEM53-207ENST00000468117 CACNG8Q8WXS5 425 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 RBM14Q96PK6 669 aaKnown RBP16.29■□□□□ 0.2
TMEM53-207ENST00000468117 GGTLC1Q9BX51 225 aa16.29■□□□□ 0.2
TMEM53-207ENST00000468117 IGKV1OR2-108A0A075B7D4 117 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 SH2D7A6NKC9 451 aaPredicted RBP16.28■□□□□ 0.2
TMEM53-207ENST00000468117 AGPAT2O15120 278 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 RAB2AP61019 212 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 LY6EQ16553 131 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 TMEM41BQ5BJD5 291 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 TMEM144Q7Z5S9 345 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 FOXC2Q99958 501 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 WNT10AQ9GZT5 417 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 TSPAN15O95858 294 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 CTRB1P17538 263 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 ASPHD1Q5U4P2 390 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 CTRB2Q6GPI1 263 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 C5orf56Q8N8D9 126 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 ACY3Q96HD9 319 aa16.28■□□□□ 0.2
TMEM53-207ENST00000468117 ACANP16112 2415 aa16.27■□□□□ 0.2
TMEM53-207ENST00000468117 H2AFB1P0C5Y9 115 aa16.27■□□□□ 0.2
TMEM53-207ENST00000468117 DEFA4P12838 97 aa16.27■□□□□ 0.2
TMEM53-207ENST00000468117 DPPA3Q6W0C5 159 aa16.27■□□□□ 0.2
TMEM53-207ENST00000468117 NANPQ8TBE9 248 aa16.27■□□□□ 0.2
TMEM53-207ENST00000468117 SLC35E1Q96K37 410 aa16.27■□□□□ 0.2
TMEM53-207ENST00000468117 MOB4Q9Y3A3 225 aa16.27■□□□□ 0.2
TMEM53-207ENST00000468117 MYO9AB2RTY4 2548 aa16.27■□□□□ 0.19
TMEM53-207ENST00000468117 I3L521 148 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 MIC13Q5XKP0 118 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 RPP25LQ8N5L8 163 aaKnown RBP16.26■□□□□ 0.19
TMEM53-207ENST00000468117 LFNGQ8NES3 379 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 MRPL36Q9P0J6 103 aaKnown RBP16.26■□□□□ 0.19
TMEM53-207ENST00000468117 IGHV3-21A0A0B4J1V1 117 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 ANKRD34BA5PLL1 514 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 FSHBP01225 129 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 EGR2P11161 476 aaPredicted RBP16.26■□□□□ 0.19
TMEM53-207ENST00000468117 BPIFB3P59826 476 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 ZNF726P1Q15940 193 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 DEFB112Q30KQ8 113 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 IL34Q6ZMJ4 242 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 SSX7Q7RTT5 188 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 EIF4E3Q8N5X7 224 aaKnown RBP16.26■□□□□ 0.19
TMEM53-207ENST00000468117 SFT2D1Q8WV19 159 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 RCC1LQ96I51 464 aaKnown RBP16.26■□□□□ 0.19
TMEM53-207ENST00000468117 PXMP4Q9Y6I8 212 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 NOTCH2Q04721 2471 aa16.26■□□□□ 0.19
TMEM53-207ENST00000468117 EIF3GO75821 320 aaKnown RBP eCLIP16.25■□□□□ 0.19
TMEM53-207ENST00000468117 RAB31Q13636 194 aa16.25■□□□□ 0.19
TMEM53-207ENST00000468117 GCSAMLQ5JQS6 135 aa16.25■□□□□ 0.19
TMEM53-207ENST00000468117 CORTO00230 105 aa16.24■□□□□ 0.19
TMEM53-207ENST00000468117 AMY1AP04745 511 aa16.24■□□□□ 0.19
TMEM53-207ENST00000468117 SRSF3P84103 164 aaKnown RBP16.24■□□□□ 0.19
TMEM53-207ENST00000468117 SPSB3Q6PJ21 355 aa16.24■□□□□ 0.19
TMEM53-207ENST00000468117 OR10G4Q8NGN3 311 aa16.24■□□□□ 0.19
TMEM53-207ENST00000468117 OR10G9Q8NGN4 311 aa16.24■□□□□ 0.19
TMEM53-207ENST00000468117 OR10G7Q8NGN6 311 aa16.24■□□□□ 0.19
TMEM53-207ENST00000468117 NPIPB3Q92617 1050 aa16.24■□□□□ 0.19
TMEM53-207ENST00000468117 SONP18583 2426 aaKnown RBP16.24■□□□□ 0.19
TMEM53-207ENST00000468117 RAB19A4D1S5 217 aa16.24■□□□□ 0.19
TMEM53-207ENST00000468117 MT-CO2P00403 227 aa16.24■□□□□ 0.19
TMEM53-207ENST00000468117 MBP02144 154 aa16.24■□□□□ 0.19
TMEM53-207ENST00000468117 CRYGCP07315 174 aa16.24■□□□□ 0.19
TMEM53-207ENST00000468117 A6NDX4 124 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms