RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 C11orf1Q9H5F2 150 aa11.8□□□□□ -0.52
NPHP4-205ENST00000466897 ADARB2-AS1A8MUL3 147 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 DEDDO75618 318 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 OR2J3O76001 311 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 IFNA10P01566 189 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 PET100P0DJ07 73 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 IAPPP10997 89 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 PVALBP20472 110 aaPredicted RBP11.79□□□□□ -0.52
NPHP4-205ENST00000466897 PAX9P55771 341 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 C15orf32Q32M92 178 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 SLC25A24Q6NUK1 477 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 LCNL1Q6ZST4 164 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 TMEM170AQ8WVE7 144 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 PPP1R1CQ8WVI7 109 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 C4orf3Q8WVX3 66 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 FBXL7Q9UJT9 491 aa11.79□□□□□ -0.52
NPHP4-205ENST00000466897 C15orf62A8K5M9 175 aa11.78□□□□□ -0.52
NPHP4-205ENST00000466897 SCAF4O95104 1147 aaKnown RBP11.78□□□□□ -0.52
NPHP4-205ENST00000466897 NDUFB8O95169 186 aa11.78□□□□□ -0.52
NPHP4-205ENST00000466897 TMEM50AO95807 157 aa11.78□□□□□ -0.52
NPHP4-205ENST00000466897 ATP5G2Q06055 141 aa11.78□□□□□ -0.52
NPHP4-205ENST00000466897 C11orf87Q6NUJ2 197 aa11.78□□□□□ -0.52
NPHP4-205ENST00000466897 ZNF343Q6P1L6 599 aa11.78□□□□□ -0.52
NPHP4-205ENST00000466897 C11orf44Q8N8P7 122 aa11.78□□□□□ -0.52
NPHP4-205ENST00000466897 CHAC2Q8WUX2 184 aa11.78□□□□□ -0.52
NPHP4-205ENST00000466897 PSENENQ9NZ42 101 aa11.78□□□□□ -0.52
NPHP4-205ENST00000466897 LSM5Q9Y4Y9 91 aaKnown RBP11.78□□□□□ -0.52
NPHP4-205ENST00000466897 TRBV7-1A0A0A6YYK4 115 aa11.77□□□□□ -0.53
NPHP4-205ENST00000466897 I3L2K1 104 aa11.77□□□□□ -0.53
NPHP4-205ENST00000466897 I3L521 148 aa11.77□□□□□ -0.53
NPHP4-205ENST00000466897 K7EIM0 57 aa11.77□□□□□ -0.53
NPHP4-205ENST00000466897 RLN2P04090 185 aa11.77□□□□□ -0.53
NPHP4-205ENST00000466897 LGALS1P09382 135 aaKnown RBP11.77□□□□□ -0.53
NPHP4-205ENST00000466897 FCGR2BP31994 310 aaPredicted RBP11.77□□□□□ -0.53
NPHP4-205ENST00000466897 S100A10P60903 97 aa11.77□□□□□ -0.53
NPHP4-205ENST00000466897 RAP2BP61225 183 aa11.77□□□□□ -0.53
NPHP4-205ENST00000466897 RAB11AP62491 216 aa11.77□□□□□ -0.53
NPHP4-205ENST00000466897 KHDC1LQ5JSQ8 128 aa11.77□□□□□ -0.53
NPHP4-205ENST00000466897 TMEM14EPQ6UXP3 125 aa11.77□□□□□ -0.53
NPHP4-205ENST00000466897 EEF1AKMT3Q96AZ1 226 aa11.77□□□□□ -0.53
NPHP4-205ENST00000466897 MISP3Q96FF7 219 aa11.77□□□□□ -0.53
NPHP4-205ENST00000466897 STRAPQ9Y3F4 350 aaKnown RBP11.77□□□□□ -0.53
NPHP4-205ENST00000466897 STAB1Q9NY15 2570 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 DNHD1Q96M86 4753 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 RPS10-NUDT3A0A1W2PQS6 291 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 E5RGE8 158 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 L7N2F9 121 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 MPC2O95563 127 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 VAMP2P63027 116 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 FGL1Q08830 312 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 SPANXN5Q5MJ07 72 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 ETFRF1Q6IPR1 90 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 KLHL30-AS1Q8NEE0 82 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 ZNF502Q8TBZ5 544 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 SCARB1Q8WTV0 552 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 OR4C12Q96R67 309 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 GNB4Q9HAV0 340 aa11.76□□□□□ -0.53
NPHP4-205ENST00000466897 LYRM2Q9NU23 88 aaPredicted RBP11.76□□□□□ -0.53
NPHP4-205ENST00000466897 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.75□□□□□ -0.53
NPHP4-205ENST00000466897 MFSD2BA6NFX1 497 aa11.75□□□□□ -0.53
NPHP4-205ENST00000466897 PRSS46E5RG02 174 aa11.75□□□□□ -0.53
NPHP4-205ENST00000466897 MT-CO2P00403 227 aa11.75□□□□□ -0.53
NPHP4-205ENST00000466897 OR8U8P0C7N1 319 aa11.75□□□□□ -0.53
NPHP4-205ENST00000466897 SLC25A4P12235 298 aa11.75□□□□□ -0.53
NPHP4-205ENST00000466897 LYL1P12980 280 aa11.75□□□□□ -0.53
NPHP4-205ENST00000466897 GPX4P36969 197 aaPredicted RBP11.75□□□□□ -0.53
NPHP4-205ENST00000466897 LRRC37A5PQ49AS3 106 aa11.75□□□□□ -0.53
NPHP4-205ENST00000466897 PRSS54Q6PEW0 395 aa11.75□□□□□ -0.53
NPHP4-205ENST00000466897 CACNG8Q8WXS5 425 aa11.75□□□□□ -0.53
NPHP4-205ENST00000466897 WDR89Q96FK6 387 aaPredicted RBP11.75□□□□□ -0.53
NPHP4-205ENST00000466897 TXN2Q99757 166 aa11.75□□□□□ -0.53
NPHP4-205ENST00000466897 GAR1Q9NY12 217 aaKnown RBP11.75□□□□□ -0.53
NPHP4-205ENST00000466897 PMS2P5A8MQ11 134 aa11.74□□□□□ -0.53
NPHP4-205ENST00000466897 H0YIZ8 118 aa11.74□□□□□ -0.53
NPHP4-205ENST00000466897 H3BP45 60 aa11.74□□□□□ -0.53
NPHP4-205ENST00000466897 IFNA4P05014 189 aa11.74□□□□□ -0.53
NPHP4-205ENST00000466897 OPRK1P41145 380 aa11.74□□□□□ -0.53
NPHP4-205ENST00000466897 P2RY1P47900 373 aa11.74□□□□□ -0.53
NPHP4-205ENST00000466897 DEFA5Q01523 94 aa11.74□□□□□ -0.53
NPHP4-205ENST00000466897 CD69Q07108 199 aa11.74□□□□□ -0.53
NPHP4-205ENST00000466897 ETV3LQ6ZN32 361 aa11.74□□□□□ -0.53
NPHP4-205ENST00000466897 CCDC140Q96MF4 163 aa11.74□□□□□ -0.53
NPHP4-205ENST00000466897 RNF126Q9BV68 326 aa11.74□□□□□ -0.53
NPHP4-205ENST00000466897 FNDC4Q9H6D8 234 aaPredicted RBP11.74□□□□□ -0.53
NPHP4-205ENST00000466897 C21orf62Q9NYP8 219 aa11.74□□□□□ -0.53
NPHP4-205ENST00000466897 OR5AC2Q9NZP5 309 aa11.74□□□□□ -0.53
NPHP4-205ENST00000466897 NUDT19A8MXV4 375 aa11.73□□□□□ -0.53
NPHP4-205ENST00000466897 FNDC10F2Z333 226 aa11.73□□□□□ -0.53
NPHP4-205ENST00000466897 IGHV3-11P01762 117 aa11.73□□□□□ -0.53
NPHP4-205ENST00000466897 MFAP4P55083 255 aa11.73□□□□□ -0.53
NPHP4-205ENST00000466897 FHL3Q13643 280 aa11.73□□□□□ -0.53
NPHP4-205ENST00000466897 C18orf65Q6ZTR6 163 aa11.73□□□□□ -0.53
NPHP4-205ENST00000466897 C8orf86Q6ZUL3 223 aa11.73□□□□□ -0.53
NPHP4-205ENST00000466897 TMEM116Q8NCL8 245 aa11.73□□□□□ -0.53
NPHP4-205ENST00000466897 OR4F17Q8NGA8 305 aa11.73□□□□□ -0.53
NPHP4-205ENST00000466897 OR4X1Q8NH49 305 aa11.73□□□□□ -0.53
NPHP4-205ENST00000466897 PINX1Q96BK5 328 aaKnown RBP11.73□□□□□ -0.53
NPHP4-205ENST00000466897 OR4F4Q96R69 305 aa11.73□□□□□ -0.53
NPHP4-205ENST00000466897 RANGRFQ9HD47 186 aaPredicted RBP11.73□□□□□ -0.53
NPHP4-205ENST00000466897 PEF1Q9UBV8 284 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms