RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 DOCK5Q9H7D0 1870 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 TRAV4A0A0B4J268 109 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 IGHV1-18A0A0C4DH31 117 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 SIGLEC16A6NMB1 481 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 H0YJX3 145 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 C3orf84H3BNL1 204 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 BUB1B-PAK6H3BSN5 160 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 CIAO1O76071 339 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 IFNA1P01562 189 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 C1QBP02746 253 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 PPBPP02775 128 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 MSMBP08118 114 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 CSRP1P21291 193 aaKnown RBP0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 NFYAP23511 347 aaPredicted RBP0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 S100A4P26447 101 aaKnown RBP0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 ATP5G3P48201 142 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 PSMD8P48556 350 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 ZNF80P51504 273 aaPredicted RBP0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 CDC42P60953 191 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 TMEM258P61165 79 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 NCALDP61601 193 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 RHOBP62745 196 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 GNG3P63215 75 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 ERHP84090 104 aaKnown RBP0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 ZNF90Q03938 601 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 SNCBQ16143 134 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 ZNF791Q3KP31 576 aaPredicted RBP0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 SPANXN3Q5MJ09 141 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 Q6Q795 121 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 DYNAPQ8N1N2 210 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 OR52R1Q8NGF1 315 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 OR13C6PQ8NH95 151 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 RASSF5Q8WWW0 418 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 DNAJC9Q8WXX5 260 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 GPR146Q96CH1 333 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 DNAJC30Q96LL9 226 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 C2orf50Q96LR7 162 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 GINS3Q9BRX5 216 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 CHST6Q9GZX3 395 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 PCBD2Q9H0N5 130 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 PYCARDQ9ULZ3 195 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 UFC1Q9Y3C8 167 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 COL5A3P25940 1745 aaPredicted RBP0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 ROCK1Q13464 1354 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 SLX4Q8IY92 1834 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 SYNMO15061 1565 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 MAST2Q6P0Q8 1798 aa0.91□□□□□ -2.26
GTF3C3-209ENST00000466862 SLIT2O94813 1529 aa0.9□□□□□ -2.26
GTF3C3-209ENST00000466862 TRPM6Q9BX84 2022 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 TMSB15BA0A087X1C1 80 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 TRGV4A0A0C4DH28 118 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 A0A1B0GVG6 124 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 ARRDC5A6NEK1 342 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 G3V2T6 193 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 TRAPPC2LH3BP13 241 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 LY6LH3BQJ8 138 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 J3QQQ9 107 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 J3QRK9 145 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 MFSD11O43934 449 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 OR2J2O76002 312 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 CASP1P29466 404 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 PEBP1P30086 187 aaKnown RBP0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 SRIP30626 198 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 SERPINB1P30740 379 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 G6PCP35575 357 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 FUSP35637 526 aaKnown RBP eCLIP0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 EIF2B2P49770 351 aaKnown RBP0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 FXYD2P54710 66 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 RPL26P61254 145 aaKnown RBP0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 SUPT4H1P63272 117 aaKnown RBP0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 RHEBQ15382 184 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 SS18Q15532 418 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 ZNF181Q2M3W8 571 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 AKR1C8PQ5T2L2 129 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 LYRM7Q5U5X0 104 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 C3orf33Q6P1S2 294 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 Q6ZTI0 123 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 MIR17HGQ75NE6 70 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 LRRC28Q86X40 367 aaPredicted RBP0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 CLVS1Q8IUQ0 354 aaPredicted RBP0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 Q8NDZ9 215 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 TERB2Q8NHR7 220 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 C11orf40Q8WZ69 217 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 TMEM106AQ96A25 262 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 SCGB3A1Q96QR1 104 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 GINS4Q9BRT9 223 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 DOHHQ9BU89 302 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 BIN3Q9NQY0 253 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 SLC39A9Q9NUM3 307 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 PRNDQ9UKY0 176 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 RPL26L1Q9UNX3 145 aaKnown RBP0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 ERGIC3Q9Y282 383 aa0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 NYNRINQ9P2P1 1898 aaKnown RBP0.9□□□□□ -2.27
GTF3C3-209ENST00000466862 DOCK6Q96HP0 2047 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 SCN10AQ9Y5Y9 1956 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 ANKRD30AQ9BXX3 1397 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 TRBV19A0A075B6N1 114 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 A0A0D9SEW6 157 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 A0A0D9SG52 128 aa0.89□□□□□ -2.27
GTF3C3-209ENST00000466862 A0A0G2JQZ4 141 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms