RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 IGHV3-64A0A075B6Q5 118 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 IGKV1D-43A0A0B4J1Z2 117 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 J3QQQ9 107 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 ARPC5O15511 151 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 PPBPP02775 128 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 SERPINE1P05121 402 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 IDO1P14902 403 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 ALDH3A1P30838 453 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 RPL26P61254 145 aaKnown RBP1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 TSNQ15631 228 aaKnown RBP1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 TPRXLQ17RH7 258 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 EXOC3-AS1Q8N2X6 119 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 GDPD1Q8N9F7 314 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 CT55Q8WUE5 264 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 RPL26L1Q9UNX3 145 aaKnown RBP1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 WDR90Q96KV7 1748 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 YTHDC2Q9H6S0 1430 aaKnown RBP1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 ADGBQ8N7X0 1667 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 PXDNLA1KZ92 1463 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 TRAV4A0A0B4J268 109 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 A0A0J9YW62 118 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 A0A0J9YY10 115 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 A0A1B0GX78 115 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 PLA2G10O15496 165 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 DHFRP00374 187 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 HMGN1P05114 100 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 LGALS1P09382 135 aaKnown RBP1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 SPI1P17947 270 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 MSNP26038 577 aaKnown RBP1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 PEBP1P30086 187 aaKnown RBP1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 TPI1P60174 286 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 IBA57Q5T440 356 aaKnown RBP1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 SSX8Q7RTT4 187 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 PACRGLQ8N7B6 248 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 TMEM35BQ8NCS4 154 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 OR13C6PQ8NH95 151 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 ZHX1-C8orf76Q96EF9 292 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 ULBP3Q9BZM4 244 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 C20orf27Q9GZN8 174 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 SH3BGRL3Q9H299 93 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 FAM96AQ9H5X1 160 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 BATF3Q9NR55 127 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 PRTFDC1Q9NRG1 225 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 MED29Q9NX70 200 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 RTL1A6NKG5 1358 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 KIF24Q5T7B8 1368 aa1.72□□□□□ -2.13
CDC42BPA-211ENST00000466538 TMSB15BA0A087X1C1 80 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 A0A1W2PRE2 83 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 ORC5O43913 435 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 CREBL2O60519 120 aaPredicted RBP1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 IGKV1-5P01602 117 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 SERPINA7P05543 415 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 CSN2P05814 226 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 SMIM10L2AP0DMW4 78 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 SMIM10L2BP0DMW5 78 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 SCGB1A1P11684 91 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 GLRXP35754 106 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 KRTAP12-1P59990 96 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 TMEM258P61165 79 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 GNG5P63218 68 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 DEFB115Q30KQ5 88 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 KRTAP13-4Q3LI77 160 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 Q6ZS49 121 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 DYNAPQ8N1N2 210 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 ANKRD29Q8N6D5 301 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 GPR146Q96CH1 333 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 RMND5BQ96G75 393 aaPredicted RBP1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 TIMM21Q9BVV7 248 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 LYRM2Q9NU23 88 aaPredicted RBP1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 ACER3Q9NUN7 267 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 FBXL12Q9NXK8 326 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 GINS2Q9Y248 185 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 CYSLTR1Q9Y271 337 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 ERGIC3Q9Y282 383 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 TIMM9Q9Y5J7 89 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 MYH7BA7E2Y1 1941 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 ARHGEF10O15013 1369 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 DISP1Q96F81 1524 aa1.71□□□□□ -2.14
CDC42BPA-211ENST00000466538 FBN1P35555 2871 aaKnown RBP1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 KPNA4O00629 521 aaPredicted RBP1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 PIAS1O75925 651 aa1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 TFPTP0C1Z6 253 aa1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 G6PCP35575 357 aa1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 ATP5G3P48201 142 aa1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 RAB13P51153 203 aa1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 TCTAP57738 103 aa1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 HIST1H4AP62805 103 aaKnown RBP1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 RPL30P62888 115 aaKnown RBP1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 SURF2Q15527 256 aaPredicted RBP1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 GLT8D1Q68CQ7 371 aa1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 TOMM20LQ6UXN7 152 aa1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 ST6GALNAC3Q8NDV1 305 aa1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 OR51T1Q8NGJ9 327 aa1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 MRPL30Q8TCC3 161 aaKnown RBP1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 GNPDA2Q8TDQ7 276 aa1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 C11orf40Q8WZ69 217 aa1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 SLC7A6Q92536 515 aa1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 WDR61Q9GZS3 305 aaKnown RBP1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 C11orf68Q9H3H3 251 aaKnown RBP1.7□□□□□ -2.14
CDC42BPA-211ENST00000466538 BICRAQ9NZM4 1560 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms