RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 TRBV7-1A0A0A6YYK4 115 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 TEX50A0A1B0GTY4 177 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 NUDT19A8MXV4 375 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 TEX22C9J3V5 150 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 IGKV1-39P01597 117 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 IGKV1-5P01602 117 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 TRGV3P03979 118 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 IGKV1D-39P04432 117 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 OR8U8P0C7N1 319 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 CTRB1P17538 263 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 ZP3P21754 424 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 HOXA1P49639 335 aaPredicted RBP5.39□□□□□ -1.55
CLDN4-204ENST00000466411 TPPP2P59282 170 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 CYCSP99999 105 aaKnown RBP5.39□□□□□ -1.55
CLDN4-204ENST00000466411 NDPQ00604 133 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 PJVKQ0ZLH3 352 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 TATDN3Q17R31 274 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 RGS21Q2M5E4 152 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 SP6Q3SY56 376 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 NMSQ5H8A3 153 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 CTRB2Q6GPI1 263 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 ETFRF1Q6IPR1 90 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 ZNF329Q86UD4 541 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 KLHL30-AS1Q8NEE0 82 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 OR1S1Q8NH92 325 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 VN1R17PQ8TDU5 208 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 ZNF431Q8TF32 576 aaPredicted RBP5.39□□□□□ -1.55
CLDN4-204ENST00000466411 CASTOR1Q8WTX7 329 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 ASB13Q8WXK3 278 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 MARVELD1Q9BSK0 173 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 RANGRFQ9HD47 186 aaPredicted RBP5.39□□□□□ -1.55
CLDN4-204ENST00000466411 ZNF355PQ9NSJ1 428 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 HSPB7Q9UBY9 170 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 F11RQ9Y624 299 aaKnown RBP5.39□□□□□ -1.55
CLDN4-204ENST00000466411 WSB1Q9Y6I7 421 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 U3KQ87 197 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 TNCP24821 2201 aa5.39□□□□□ -1.55
CLDN4-204ENST00000466411 TRAV6A0A075B6T7 132 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 TRBV9A0A0B4J1U6 114 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 RPS10-NUDT3A0A1W2PQS6 291 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 IGLC7A0M8Q6 106 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 SH2D7A6NKC9 451 aaPredicted RBP5.38□□□□□ -1.55
CLDN4-204ENST00000466411 CEBPZOSA8MTT3 80 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 INMT-MINDY4F8WBC2 141 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 G3V318 75 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 WRBO00258 174 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 LGALS1P09382 135 aaKnown RBP5.38□□□□□ -1.55
CLDN4-204ENST00000466411 PET100P0DJ07 73 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 OR13C7P0DN81 318 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 CD28P10747 220 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 EGR2P11161 476 aaPredicted RBP5.38□□□□□ -1.55
CLDN4-204ENST00000466411 MYCNOSP40205 109 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 KRTAP10-11P60412 298 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 SSBP2P81877 361 aaPredicted RBP5.38□□□□□ -1.55
CLDN4-204ENST00000466411 ATP5G2Q06055 141 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 TNFRSF9Q07011 255 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 MRGPRG-AS1Q2M3A8 158 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 DEFB121Q5J5C9 76 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 SPSB3Q6PJ21 355 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 NRARPQ7Z6K4 114 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 ZNF491Q8N8L2 437 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 RNASEH2CQ8TDP1 164 aaKnown RBP5.38□□□□□ -1.55
CLDN4-204ENST00000466411 EEF1AKMT3Q96AZ1 226 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 TXN2Q99757 166 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 CITED2Q99967 270 aaPredicted RBP5.38□□□□□ -1.55
CLDN4-204ENST00000466411 FAM103A1Q9BTL3 118 aaKnown RBP5.38□□□□□ -1.55
CLDN4-204ENST00000466411 HINT2Q9BX68 163 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 HEYLQ9NQ87 328 aaPredicted RBP5.38□□□□□ -1.55
CLDN4-204ENST00000466411 CACNG5Q9UF02 275 aa5.38□□□□□ -1.55
CLDN4-204ENST00000466411 A0A0B4J293 547 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 LINC01548A6NM66 108 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 DBX1A6NMT0 343 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 ZNF561-AS1K7EIQ3 104 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 ST8SIA3O43173 380 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 NHLRC4P0CG21 123 aaPredicted RBP5.37□□□□□ -1.55
CLDN4-204ENST00000466411 ANXA7P20073 488 aaKnown RBP5.37□□□□□ -1.55
CLDN4-204ENST00000466411 PVALBP20472 110 aaPredicted RBP5.37□□□□□ -1.55
CLDN4-204ENST00000466411 FCGR2BP31994 310 aaPredicted RBP5.37□□□□□ -1.55
CLDN4-204ENST00000466411 INSL3P51460 131 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 RAB11AP62491 216 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 RHOGP84095 191 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 ZNF616Q08AN1 781 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 LYZL2Q7Z4W2 148 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 C12orf45Q8N5I9 185 aaPredicted RBP5.37□□□□□ -1.55
CLDN4-204ENST00000466411 OR2C3Q8N628 320 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 LHFPL5Q8TAF8 219 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 DTD1Q8TEA8 209 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 DCUN1D4Q92564 292 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 DPF1Q92782 380 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 BSCL2Q96G97 398 aaPredicted RBP5.37□□□□□ -1.55
CLDN4-204ENST00000466411 RAB40CQ96S21 281 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 LINC00527Q9UJ94 153 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 FBXO7Q9Y3I1 522 aa5.37□□□□□ -1.55
CLDN4-204ENST00000466411 IGLV11-55A0A075B6I3 123 aa5.36□□□□□ -1.55
CLDN4-204ENST00000466411 TRAV3A0A0B4J244 114 aa5.36□□□□□ -1.55
CLDN4-204ENST00000466411 LINC01619G3V211 115 aa5.36□□□□□ -1.55
CLDN4-204ENST00000466411 I3L521 148 aa5.36□□□□□ -1.55
CLDN4-204ENST00000466411 SYNGR2O43760 224 aa5.36□□□□□ -1.55
CLDN4-204ENST00000466411 SSNA1O43805 119 aa5.36□□□□□ -1.55
CLDN4-204ENST00000466411 SOX15O60248 233 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms