RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 PCDH15Q96QU1 1955 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 PTPRSQ13332 1948 aa0.75□□□□□ -2.29
SSB-207ENST00000465871 SNAPC4Q5SXM2 1469 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 CPAMD8Q8IZJ3 1885 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 IGKV2-40A0A087WW87 121 aaPredicted RBP0.74□□□□□ -2.29
SSB-207ENST00000465871 TRAV14DV4A0A0A6YYC5 116 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 PQLC2LA1A4F0 135 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 TRAPPC13A5PLN9 417 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 DPRXA6NFQ7 191 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 PIRO00625 290 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 OR5F1O95221 314 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 IGKV1-5P01602 117 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 IGKV2D-40P01614 121 aaPredicted RBP0.74□□□□□ -2.29
SSB-207ENST00000465871 SERPINA6P08185 405 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 HTR1AP08908 422 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 CRYGAP11844 174 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 CDKN2CP42773 168 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 ZNF80P51504 273 aaPredicted RBP0.74□□□□□ -2.29
SSB-207ENST00000465871 KHDC3LQ587J8 217 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 C1orf158Q8N1D5 194 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 C15orf53Q8NAA6 179 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 OR4E2Q8NGC2 313 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 OR5A1Q8NGJ0 315 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 C10orf105Q8TEF2 133 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 H1FXQ92522 213 aaKnown RBP0.74□□□□□ -2.29
SSB-207ENST00000465871 TOMM6Q96B49 74 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 CMSS1Q9BQ75 279 aaKnown RBP0.74□□□□□ -2.29
SSB-207ENST00000465871 CCDC90BQ9GZT6 254 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 OR51V1Q9H2C8 321 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.74□□□□□ -2.29
SSB-207ENST00000465871 SLC39A9Q9NUM3 307 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 MRPL27Q9P0M9 148 aaKnown RBP0.74□□□□□ -2.29
SSB-207ENST00000465871 TP73-AS1Q9UF72 201 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 LHFPL6Q9Y693 200 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 TMEM56-RWDD3S4R434 201 aa0.74□□□□□ -2.29
SSB-207ENST00000465871 RALGAPA2Q2PPJ7 1873 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 WRNQ14191 1432 aaPredicted RBP eCLIP0.73□□□□□ -2.29
SSB-207ENST00000465871 SETD5Q9C0A6 1442 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 RP1P56715 2156 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 INTS1Q8N201 2190 aaKnown RBP0.73□□□□□ -2.29
SSB-207ENST00000465871 MTUS2Q5JR59 1369 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 TONSLQ96HA7 1378 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 TRAV26-2A0A0B4J265 109 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 A0A0D9SG52 128 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 FAM236DA0A1B0GTK5 79 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 CNIH1O95406 144 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 IFNA10P01566 189 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 TTRP02766 147 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 TCRBP04435 133 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 FAM236CP0DP71 79 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 SPI1P17947 270 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 S100A4P26447 101 aaKnown RBP0.73□□□□□ -2.29
SSB-207ENST00000465871 FKBP2P26885 142 aaKnown RBP0.73□□□□□ -2.29
SSB-207ENST00000465871 ZNF846Q147U1 533 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 CDK10Q15131 360 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 SPA17Q15506 151 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 MIR17HGQ75NE6 70 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 OR13C4Q8NGS5 318 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 RETNLBQ9BQ08 111 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 REG4Q9BYZ8 158 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 TRIM4Q9C037 500 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 ERGIC3Q9Y282 383 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 PRELID3BQ9Y3B1 194 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 MYH11P35749 1972 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 DIDO1Q9BTC0 2240 aaKnown RBP0.73□□□□□ -2.29
SSB-207ENST00000465871 CCDC88AQ3V6T2 1871 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 MYOFQ9NZM1 2061 aa0.73□□□□□ -2.29
SSB-207ENST00000465871 MYO3BQ8WXR4 1341 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 ARFGEF3Q5TH69 2177 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 IGKV3-7A0A075B6H7 116 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 IGKV1D-42A0A075B6H8 117 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 A0A087WUJ7 227 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 FUOMA2VDF0 154 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 SMIM9A6NGZ8 99 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 TMEM114B3SHH9 223 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 KPNA3O00505 521 aaPredicted RBP0.72□□□□□ -2.29
SSB-207ENST00000465871 MRPS14O60783 128 aaKnown RBP0.72□□□□□ -2.29
SSB-207ENST00000465871 SHBGP04278 402 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 SMIM17P0DL12 118 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 IL9P15248 144 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 DEFA3P59666 94 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 LSM6P62312 80 aaKnown RBP0.72□□□□□ -2.29
SSB-207ENST00000465871 RGS21Q2M5E4 152 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 OOSP2Q86WS3 158 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 HIST3H2BBQ8N257 126 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 OR52R1Q8NGF1 315 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 TERB2Q8NHR7 220 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 PFN4Q8NHR9 129 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 BORCS7Q96B45 105 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 TSPAN32Q96QS1 320 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 SLC50A1Q9BRV3 221 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 DCSTAMPQ9H295 470 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 UQCC1Q9NVA1 299 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 C14orf105Q9NVL8 296 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 GLTPQ9NZD2 209 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 OR5AC2Q9NZP5 309 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 SNURFQ9Y675 71 aa0.72□□□□□ -2.29
SSB-207ENST00000465871 MED12LQ86YW9 2145 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 BRWD1Q9NSI6 2320 aa0.71□□□□□ -2.3
SSB-207ENST00000465871 hCG_1818297A0A087WSY0 165 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms