RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 TFPI2P48307 235 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 CMC4P56277 68 aaPredicted RBP7.12□□□□□ -1.27
USP39-212ENST00000465514 RELQ04864 619 aaPredicted RBP7.12□□□□□ -1.27
USP39-212ENST00000465514 CMTM1Q8IZ96 169 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 TMEM116Q8NCL8 245 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 OR5H2Q8NGV7 314 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 OR1P1Q8NH06 330 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 C11orf45Q8TAV5 145 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 SLC25A46Q96AG3 418 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 RHPN1-AS1Q9BWJ2 59 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 MFFQ9GZY8 342 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 CSTL1Q9H114 145 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 Q9H521 79 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 TMEM14BQ9NUH8 114 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 FKBP11Q9NYL4 201 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 PRNDQ9UKY0 176 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 ANAPC10Q9UM13 185 aa7.12□□□□□ -1.27
USP39-212ENST00000465514 IGKV3-7A0A075B6H7 116 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 IGHV3OR16-13A0A075B7E8 117 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 IGHV3-74A0A0B4J1X5 117 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 C15orf61A6NNL5 157 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 MPTX1A8MV57 137 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 I3L2K1 104 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 GPR31O00270 319 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 NUPL2O15504 423 aaKnown RBP7.11□□□□□ -1.27
USP39-212ENST00000465514 TMEM127O75204 238 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 YIF1AO95070 293 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 NAT1P18440 290 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 MFAP4P55083 255 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 TAS2R46P59540 309 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 TAS2R20P59543 309 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 NEDD8Q15843 81 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 PHLDA2Q53GA4 152 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 UBE2NLQ5JXB2 153 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 TMEM69Q5SWH9 247 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 LYSMD2Q8IV50 215 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 GBGT1Q8N5D6 347 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 OR6F1Q8NGZ6 308 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 MISP3Q96FF7 219 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 OR10C1Q96KK4 312 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 RARRES2Q99969 163 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 FXYD6Q9H0Q3 95 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 AGRNO00468 2067 aa7.11□□□□□ -1.27
USP39-212ENST00000465514 MYCBP2O75592 4640 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 TRAV14DV4A0A0A6YYC5 116 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 C16orf90A8MZG2 172 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 ATP6V1G2O95670 118 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 MT-CO2P00403 227 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 IGHV3-48P01763 117 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 PRSS3P35030 304 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 HRH1P35367 487 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 TGFBR1P36897 503 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 FAM90A2PQ658T7 463 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 CROCCP3Q8IVE0 287 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 SAMD12Q8N8I0 201 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 OR11H2Q8NH07 326 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 OR4A16Q8NH70 328 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 CMTM3Q96MX0 182 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 TSC22D3Q99576 134 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 TXN2Q99757 166 aa7.1□□□□□ -1.27
USP39-212ENST00000465514 NXF2Q9GZY0 626 aaKnown RBP7.1□□□□□ -1.27
USP39-212ENST00000465514 IGKV1-39P01597 117 aa7.09□□□□□ -1.27
USP39-212ENST00000465514 IGKV1D-39P04432 117 aa7.09□□□□□ -1.27
USP39-212ENST00000465514 HLA-DMAP28067 261 aa7.09□□□□□ -1.27
USP39-212ENST00000465514 S100GP29377 79 aa7.09□□□□□ -1.27
USP39-212ENST00000465514 RPS19P39019 145 aaKnown RBP7.09□□□□□ -1.27
USP39-212ENST00000465514 PAFAH1B2P68402 229 aa7.09□□□□□ -1.27
USP39-212ENST00000465514 TCF24Q7RTU0 167 aa7.09□□□□□ -1.27
USP39-212ENST00000465514 H2BFWTQ7Z2G1 175 aa7.09□□□□□ -1.27
USP39-212ENST00000465514 TBC1D26Q86UD7 250 aa7.09□□□□□ -1.27
USP39-212ENST00000465514 SEC22AQ96IW7 307 aa7.09□□□□□ -1.27
USP39-212ENST00000465514 FAM212BQ9NTI7 297 aaPredicted RBP7.09□□□□□ -1.27
USP39-212ENST00000465514 DEFB4AO15263 64 aa7.08□□□□□ -1.28
USP39-212ENST00000465514 GNG7O60262 68 aa7.08□□□□□ -1.28
USP39-212ENST00000465514 CA1P00915 261 aaPredicted RBP7.08□□□□□ -1.28
USP39-212ENST00000465514 APOHP02749 345 aaPredicted RBP7.08□□□□□ -1.28
USP39-212ENST00000465514 HSPE1P61604 102 aaKnown RBP7.08□□□□□ -1.28
USP39-212ENST00000465514 TSPAN5P62079 268 aa7.08□□□□□ -1.28
USP39-212ENST00000465514 PRCDQ00LT1 54 aa7.08□□□□□ -1.28
USP39-212ENST00000465514 LPCAT3Q6P1A2 487 aa7.08□□□□□ -1.28
USP39-212ENST00000465514 TOMM20LQ6UXN7 152 aa7.08□□□□□ -1.28
USP39-212ENST00000465514 LILRB2Q8N423 598 aa7.08□□□□□ -1.28
USP39-212ENST00000465514 ZNF114Q8NC26 417 aa7.08□□□□□ -1.28
USP39-212ENST00000465514 ST8SIA2Q92186 375 aa7.08□□□□□ -1.28
USP39-212ENST00000465514 PINX1Q96BK5 328 aaKnown RBP7.08□□□□□ -1.28
USP39-212ENST00000465514 C11orf68Q9H3H3 251 aaKnown RBP7.08□□□□□ -1.28
USP39-212ENST00000465514 IGHV3-66A0A0C4DH42 116 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 DNASE2O00115 360 aaPredicted RBP7.07□□□□□ -1.28
USP39-212ENST00000465514 ST8SIA3O43173 380 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 DFFBO76075 338 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 CD5P06127 495 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 EIF4EP06730 217 aaKnown RBP7.07□□□□□ -1.28
USP39-212ENST00000465514 DEFB131AP59861 70 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 LSM3P62310 102 aaKnown RBP7.07□□□□□ -1.28
USP39-212ENST00000465514 RPL11P62913 178 aaKnown RBP7.07□□□□□ -1.28
USP39-212ENST00000465514 ERHP84090 104 aaKnown RBP7.07□□□□□ -1.28
USP39-212ENST00000465514 TMEM187Q14656 261 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 IZUMO4Q1ZYL8 232 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 SPINK9Q5DT21 86 aa7.07□□□□□ -1.28
USP39-212ENST00000465514 LEMD1Q68G75 181 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms