RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 H7BYZ3 331 aa17.52■□□□□ 0.4
PDLIM2-216ENST00000464275 SLC25A17O43808 307 aa17.52■□□□□ 0.4
PDLIM2-216ENST00000464275 PFN1P07737 140 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-216ENST00000464275 ARF6P62330 175 aa17.52■□□□□ 0.4
PDLIM2-216ENST00000464275 TEPPQ6URK8 271 aa17.52■□□□□ 0.4
PDLIM2-216ENST00000464275 OR10W1Q8NGF6 305 aa17.52■□□□□ 0.4
PDLIM2-216ENST00000464275 OR4F5Q8NH21 305 aa17.52■□□□□ 0.4
PDLIM2-216ENST00000464275 BTF3L4Q96K17 158 aa17.52■□□□□ 0.4
PDLIM2-216ENST00000464275 OR4F4Q96R69 305 aa17.52■□□□□ 0.4
PDLIM2-216ENST00000464275 DMRT1Q9Y5R6 373 aa17.52■□□□□ 0.4
PDLIM2-216ENST00000464275 NDUFS7O75251 213 aa17.51■□□□□ 0.39
PDLIM2-216ENST00000464275 TRGC1P0CF51 173 aa17.51■□□□□ 0.39
PDLIM2-216ENST00000464275 OR11H6Q8NGC7 330 aa17.51■□□□□ 0.39
PDLIM2-216ENST00000464275 RITA1Q96K30 269 aa17.51■□□□□ 0.39
PDLIM2-216ENST00000464275 PITPNC1Q9UKF7 332 aa17.51■□□□□ 0.39
PDLIM2-216ENST00000464275 IFITM10A6NMD0 228 aa17.51■□□□□ 0.39
PDLIM2-216ENST00000464275 PHOX2AO14813 284 aa17.51■□□□□ 0.39
PDLIM2-216ENST00000464275 GOSR1O95249 250 aa17.51■□□□□ 0.39
PDLIM2-216ENST00000464275 HIST3H2BBQ8N257 126 aa17.51■□□□□ 0.39
PDLIM2-216ENST00000464275 FRZBQ92765 325 aa17.51■□□□□ 0.39
PDLIM2-216ENST00000464275 RPUSD4Q96CM3 377 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-216ENST00000464275 C1orf159Q96HA4 380 aa17.51■□□□□ 0.39
PDLIM2-216ENST00000464275 PXMP4Q9Y6I8 212 aa17.51■□□□□ 0.39
PDLIM2-216ENST00000464275 CD99P14209 185 aa17.5■□□□□ 0.39
PDLIM2-216ENST00000464275 RAB31Q13636 194 aa17.5■□□□□ 0.39
PDLIM2-216ENST00000464275 SPNS3Q6ZMD2 512 aa17.5■□□□□ 0.39
PDLIM2-216ENST00000464275 C16orf82Q7Z2V1 217 aa17.5■□□□□ 0.39
PDLIM2-216ENST00000464275 LRBAP50851 2863 aa17.5■□□□□ 0.39
PDLIM2-216ENST00000464275 F6UZH7 168 aa17.49■□□□□ 0.39
PDLIM2-216ENST00000464275 PRTN3P24158 256 aa17.49■□□□□ 0.39
PDLIM2-216ENST00000464275 SRP14P37108 136 aaKnown RBP17.49■□□□□ 0.39
PDLIM2-216ENST00000464275 OR51G1Q8NGK1 321 aa17.49■□□□□ 0.39
PDLIM2-216ENST00000464275 ABHD5Q8WTS1 349 aa17.49■□□□□ 0.39
PDLIM2-216ENST00000464275 CGB1A6NKQ9 187 aa17.49■□□□□ 0.39
PDLIM2-216ENST00000464275 LINC00587B1AMM8 73 aa17.49■□□□□ 0.39
PDLIM2-216ENST00000464275 E7EUB6 86 aa17.49■□□□□ 0.39
PDLIM2-216ENST00000464275 CRYGBP07316 175 aa17.49■□□□□ 0.39
PDLIM2-216ENST00000464275 MRGPRG-AS1Q2M3A8 158 aa17.49■□□□□ 0.39
PDLIM2-216ENST00000464275 C1orf122Q6ZSJ8 110 aa17.49■□□□□ 0.39
PDLIM2-216ENST00000464275 MMD2Q8IY49 270 aa17.49■□□□□ 0.39
PDLIM2-216ENST00000464275 KIR3DL3Q8N743 410 aa17.49■□□□□ 0.39
PDLIM2-216ENST00000464275 C11orf94C9JXX5 98 aa17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 PAGE4O60829 102 aa17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 HTR1DP28221 377 aa17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 GALR1P47211 349 aa17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 FAM3BP58499 235 aaPredicted RBP17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 TPTE2P1Q5T6R2 138 aa17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 MIC13Q5XKP0 118 aa17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 RNF5Q99942 180 aa17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 A0A1W2PPV4 95 aa17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 HMGB3O15347 200 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 RPL29P47914 159 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 PSG5Q15238 335 aa17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 TMEM144Q7Z5S9 345 aa17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 SSX3Q99909 188 aa17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 TPSG1Q9NRR2 321 aa17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 DPM3Q9P2X0 92 aa17.48■□□□□ 0.39
PDLIM2-216ENST00000464275 A0A1W2PPI3 338 aa17.47■□□□□ 0.39
PDLIM2-216ENST00000464275 PPP5D1E7EU14 171 aa17.47■□□□□ 0.39
PDLIM2-216ENST00000464275 OVOL3O00110 214 aa17.47■□□□□ 0.39
PDLIM2-216ENST00000464275 SUB1P53999 127 aaKnown RBP eCLIP17.47■□□□□ 0.39
PDLIM2-216ENST00000464275 CD69Q07108 199 aa17.47■□□□□ 0.39
PDLIM2-216ENST00000464275 PYY3Q5JQD4 70 aa17.47■□□□□ 0.39
PDLIM2-216ENST00000464275 GPX4P36969 197 aaPredicted RBP17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 CEACAM3P40198 252 aa17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 WT1-ASQ06250 92 aa17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 PRSS8Q16651 343 aa17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 C10orf55Q5SWW7 151 aa17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 MRPL41Q8IXM3 137 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 CACNG8Q8WXS5 425 aa17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 PLXNB1O43157 2135 aa17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 TYMSP04818 313 aa17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 GCSAMLQ5JQS6 135 aa17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 HCP5Q6MZN7 132 aa17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 KCNIP4Q6PIL6 250 aa17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 SSMEM1Q8WWF3 244 aa17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 IMMP2LQ96T52 175 aa17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 SIGLEC9Q9Y336 463 aa17.46■□□□□ 0.39
PDLIM2-216ENST00000464275 ODF3BA8MYP8 253 aa17.45■□□□□ 0.38
PDLIM2-216ENST00000464275 GGCTO75223 188 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-216ENST00000464275 CNTFRP26992 372 aa17.45■□□□□ 0.38
PDLIM2-216ENST00000464275 LCN2P80188 198 aa17.45■□□□□ 0.38
PDLIM2-216ENST00000464275 COA6Q5JTJ3 125 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-216ENST00000464275 GAMTQ14353 236 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 STPG3Q8N7X2 389 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 OR10D4PQ8NGN7 298 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 OR4X1Q8NH49 305 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 RNASEH2CQ8TDP1 164 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 ACY3Q96HD9 319 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 ACTL6BO94805 426 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 CXorf1O96002 111 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 STAG3L2P0CL84 134 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 STAG3L3P0CL85 134 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 DEFA4P12838 97 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 ZFP36P26651 326 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 RPL27AP46776 148 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 KLRD1Q13241 179 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 LDLRAD2Q5SZI1 272 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 TMEM183AQ8IXX5 376 aa17.44■□□□□ 0.38
PDLIM2-216ENST00000464275 GATAD1Q8WUU5 269 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms