RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 STPG3Q8N7X2 389 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 RNF183Q96D59 192 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 RNF2Q99496 336 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 C6orf62Q9GZU0 229 aaPredicted RBP10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 KLK11Q9UBX7 282 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 MTFP1Q9UDX5 166 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 BIRC6Q9NR09 4857 aa10.63□□□□□ -0.71
SNRNP40-203ENST00000463988 TRAV14DV4A0A0A6YYC5 116 aa10.63□□□□□ -0.71
SNRNP40-203ENST00000463988 GNG7O60262 68 aa10.63□□□□□ -0.71
SNRNP40-203ENST00000463988 IGKV1-5P01602 117 aa10.63□□□□□ -0.71
SNRNP40-203ENST00000463988 CD3DP04234 171 aa10.63□□□□□ -0.71
SNRNP40-203ENST00000463988 PGAM2P15259 253 aa10.63□□□□□ -0.71
SNRNP40-203ENST00000463988 PIGPP57054 158 aa10.63□□□□□ -0.71
SNRNP40-203ENST00000463988 DEFB135Q30KP9 77 aa10.63□□□□□ -0.71
SNRNP40-203ENST00000463988 PVRIGQ6DKI7 326 aa10.63□□□□□ -0.71
SNRNP40-203ENST00000463988 OR52I2Q8NH67 350 aa10.63□□□□□ -0.71
SNRNP40-203ENST00000463988 HYDINQ4G0P3 5121 aa10.63□□□□□ -0.71
SNRNP40-203ENST00000463988 A0A0B4J293 547 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 A0A0J9YWU9 116 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 C3orf85A0A1B0GTC6 90 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 B3GALNT1O75752 331 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 CD74P04233 296 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 SNCAP37840 140 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 NPBWR1P48145 328 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 FAM90A2PQ658T7 463 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 LYG2Q86SG7 212 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 DUSP18Q8NEJ0 188 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 TERB2Q8NHR7 220 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 ZFAND1Q8TCF1 268 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 PINX1Q96BK5 328 aaKnown RBP10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 TP53RKQ96S44 253 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 GINS3Q9BRX5 216 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 MAP6D1Q9H9H5 199 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 EXTL2Q9UBQ6 330 aa10.62□□□□□ -0.71
SNRNP40-203ENST00000463988 CORTO00230 105 aa10.61□□□□□ -0.71
SNRNP40-203ENST00000463988 PI3P19957 117 aa10.61□□□□□ -0.71
SNRNP40-203ENST00000463988 AKR1C2P52895 323 aa10.61□□□□□ -0.71
SNRNP40-203ENST00000463988 SUB1P53999 127 aaKnown RBP eCLIP10.61□□□□□ -0.71
SNRNP40-203ENST00000463988 IZUMO4Q1ZYL8 232 aa10.61□□□□□ -0.71
SNRNP40-203ENST00000463988 TMEM217Q8N7C4 229 aa10.61□□□□□ -0.71
SNRNP40-203ENST00000463988 SLC35G3Q8N808 338 aa10.61□□□□□ -0.71
SNRNP40-203ENST00000463988 CCDC71LQ8N9Z2 235 aa10.61□□□□□ -0.71
SNRNP40-203ENST00000463988 TMEM229BQ8NBD8 167 aa10.61□□□□□ -0.71
SNRNP40-203ENST00000463988 ABHD1Q96SE0 405 aa10.61□□□□□ -0.71
SNRNP40-203ENST00000463988 NAA50Q9GZZ1 169 aaKnown RBP10.61□□□□□ -0.71
SNRNP40-203ENST00000463988 COPZ2Q9P299 210 aa10.61□□□□□ -0.71
SNRNP40-203ENST00000463988 ALMS1Q8TCU4 4167 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 CXorf65A6NEN9 183 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 NUPR2A6NF83 97 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 ST8SIA3O43173 380 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 IFNA17P01571 189 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 IGHV3-48P01763 117 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 SMIM18P0DKX4 95 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 RPL35AP18077 110 aaKnown RBP10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 UCP1P25874 307 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 TAS2R19P59542 299 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 PAFAH1B2P68402 229 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 SSBP1Q04837 148 aaKnown RBP10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 RNASE12Q5GAN4 147 aaKnown RBP10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 GPR107Q5VW38 600 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 TOMM20LQ6UXN7 152 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 ZNF600Q6ZNG1 722 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 PDCD10Q9BUL8 212 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 CSTL1Q9H114 145 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 VSIRQ9H7M9 311 aa10.6□□□□□ -0.71
SNRNP40-203ENST00000463988 IGHV3-49A0A0A0MS15 119 aa10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 TRAV2A0A0B4J234 112 aa10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 MPTX1A8MV57 137 aa10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 RAB3DO95716 219 aa10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 TMEM50AO95807 157 aa10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 RNASE2P10153 161 aaKnown RBP10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 RPL5P46777 297 aaKnown RBP10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 MRPS10P82664 201 aaKnown RBP10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 TRIM16LQ309B1 348 aa10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 AARDQ4LEZ3 155 aa10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 SPINK9Q5DT21 86 aa10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 APRG1Q8IVJ8 170 aa10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 OR4D10Q8NGI6 311 aa10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 OR13C8Q8NGS7 320 aa10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 RRNAD1Q96FB5 475 aaKnown RBP10.59□□□□□ -0.71
SNRNP40-203ENST00000463988 GABARAPH6UMI1 98 aa10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 ETV6P41212 452 aa10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 TFPI2P48307 235 aa10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 PPP5CP53041 499 aa10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 EWSR1Q01844 656 aaKnown RBP eCLIP10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 MEF2DQ14814 521 aa10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 STEAP1BQ6NZ63 245 aa10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 CEMP1Q6PRD7 247 aaPredicted RBP10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 TCF24Q7RTU0 167 aa10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 FAM219AQ8IW50 185 aa10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 GATAD1Q8WUU5 269 aa10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 LINC00476Q8WZB0 136 aa10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 ST8SIA2Q92186 375 aa10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 ENY2Q9NPA8 101 aa10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 PUS1Q9Y606 427 aaKnown RBP eCLIP10.58□□□□□ -0.72
SNRNP40-203ENST00000463988 IGHV3OR16-13A0A075B7E8 117 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 IGHV3-74A0A0B4J1X5 117 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 SCGB2A1O75556 95 aa10.57□□□□□ -0.72
SNRNP40-203ENST00000463988 DFFBO76075 338 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms