RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 ZNF181Q2M3W8 571 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 PYDC2Q56P42 97 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 BRMS1LQ5PSV4 323 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 C6orf52Q5T4I8 152 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 DCUN1D2Q6PH85 259 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 SLC22A24Q8N4F4 322 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 CNEP1R1Q8N9A8 125 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 PYDC1Q8WXC3 89 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 AP3S1Q92572 193 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 BTF3L4Q96K17 158 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 C12orf57Q99622 126 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 SIGMAR1Q99720 223 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 CMSS1Q9BQ75 279 aaKnown RBP2.08□□□□□ -2.08
USH2A-203ENST00000463147 TRABDQ9H4I3 376 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 EFCAB1Q9HAE3 211 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 GPR84Q9NQS5 396 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 IDI2-AS1Q9NZ38 188 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 GINS2Q9Y248 185 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 SAMHD1Q9Y3Z3 626 aaKnown RBP2.08□□□□□ -2.08
USH2A-203ENST00000463147 MINOS1-NBL1R4GNA1 71 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 TMEM131LA2VDJ0 1609 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 CPDO75976 1380 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 SPHKAPQ2M3C7 1700 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 PXDNLA1KZ92 1463 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 MYH6P13533 1939 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 UNC13BO14795 1591 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 VWDEQ8N2E2 1590 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 MYO3AQ8NEV4 1616 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 IGHV3-73A0A0B4J1V6 119 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 A0A0D9SFI3 127 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 A0A1B0GV50 99 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 DHRS12A0PJE2 317 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 PQLC2LA1A4F0 135 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 FAM92AA1XBS5 289 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 ZNF878C9JN71 531 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 I3L521 148 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 FAAHO00519 579 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 FABP1P07148 127 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 TRAPPC2P0DI81 140 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 TRAPPC2BP0DI82 140 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 IL7P13232 177 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 CYBAP13498 195 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 ERP29P30040 261 aaKnown RBP2.07□□□□□ -2.08
USH2A-203ENST00000463147 RPL35P42766 123 aaKnown RBP2.07□□□□□ -2.08
USH2A-203ENST00000463147 RAB4BP61018 213 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 FOXF1Q12946 379 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 EDDM3AQ14507 147 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 CST6Q15828 149 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 TMEM97Q5BJF2 176 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 GLT6D1Q7Z4J2 308 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 C4orf33Q8N1A6 199 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 ZNF676Q8N7Q3 588 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 LINC00304Q8N9R0 145 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 OR5C1Q8NGR4 320 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 RNASE11Q8TAA1 199 aaKnown RBP2.07□□□□□ -2.08
USH2A-203ENST00000463147 MGLLQ99685 303 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 ENY2Q9NPA8 101 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 CISHQ9NSE2 258 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 DOK5Q9P104 306 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 HSPE1-MOB4S4R3N1 261 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 MYO16Q9Y6X6 1858 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 BCL9LQ86UU0 1499 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 ABCC1P33527 1531 aa2.07□□□□□ -2.08
USH2A-203ENST00000463147 BICRAQ9NZM4 1560 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 CEP170BQ9Y4F5 1589 aaPredicted RBP2.06□□□□□ -2.08
USH2A-203ENST00000463147 CHD1O14646 1710 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 ARHGEF28Q8N1W1 1705 aaKnown RBP2.06□□□□□ -2.08
USH2A-203ENST00000463147 PSME4Q14997 1843 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 IGLV10-54A0A075B6I4 117 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 IGKV1D-43A0A0B4J1Z2 117 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 PNMA8CA0A1B0GUJ8 204 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 EXOC1LA0A1B0GW35 172 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 C17orf51A8MQB3 221 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 UBE2L6O14933 153 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 SYNGR2O43760 224 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 TTRP02766 147 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 IFNA4P05014 189 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 CST2P09228 141 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 P0C880 135 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 S100PP25815 95 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 CASP1P29466 404 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 RAB13P51153 203 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 RBM11P57052 281 aaKnown RBP2.06□□□□□ -2.08
USH2A-203ENST00000463147 PSME3P61289 254 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 SNRPD2P62316 118 aaKnown RBP2.06□□□□□ -2.08
USH2A-203ENST00000463147 FKBP1AP62942 108 aaKnown RBP2.06□□□□□ -2.08
USH2A-203ENST00000463147 ZNF117Q03924 483 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 HSD17B12Q53GQ0 312 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 TMEM42Q69YG0 159 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 C3orf33Q6P1S2 294 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 ZNF322Q6U7Q0 402 aaPredicted RBP2.06□□□□□ -2.08
USH2A-203ENST00000463147 ZNF283Q8N7M2 679 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 PXT1Q8NFP0 134 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 OR8B12Q8NGG6 310 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 OR10X1Q8NGY0 326 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 OR4X1Q8NH49 305 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 CLDND2Q8NHS1 167 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 PPP3R2Q96LZ3 170 aa2.06□□□□□ -2.08
USH2A-203ENST00000463147 OR52E6Q96RD3 313 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms