RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SH2D7A6NKC9 451 aaPredicted RBP8.38□□□□□ -1.07
RTF1-202ENST00000462276 LINC01548A6NM66 108 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 TAAR5O14804 337 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 IGHG4P01861 327 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 ELANEP08246 267 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 HKR1P10072 659 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 AP2S1P53680 142 aaPredicted RBP8.38□□□□□ -1.07
RTF1-202ENST00000462276 ECSCRQ19T08 205 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 SLC25A24Q6NUK1 477 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 TEX38Q6PEX7 206 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 Q6ZS46 218 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 Q6ZSV7 163 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 NECAP1Q8NC96 275 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 OR11H4Q8NGC9 324 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 USMG5Q96IX5 58 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 ATP6V0BQ99437 205 aa8.38□□□□□ -1.07
RTF1-202ENST00000462276 GAR1Q9NY12 217 aaKnown RBP8.38□□□□□ -1.07
RTF1-202ENST00000462276 IGLV11-55A0A075B6I3 123 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 TRBV9A0A0B4J1U6 114 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 A0A0G2JLM5 398 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 FAM223BA6NKX1 122 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 G3V318 75 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 H3BP45 60 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 SMLR1H3BR10 107 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 ARPC5O15511 151 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 DFFBO76075 338 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 IGLV1-40P01703 118 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 HNRNPCP07910 306 aaKnown RBP eCLIP8.37□□□□□ -1.07
RTF1-202ENST00000462276 METTL15P1P0C7V9 234 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 EWSR1Q01844 656 aaKnown RBP eCLIP8.37□□□□□ -1.07
RTF1-202ENST00000462276 CFHR3Q02985 330 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 FOXE3Q13461 319 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 CENPVQ7Z7K6 275 aaPredicted RBP8.37□□□□□ -1.07
RTF1-202ENST00000462276 FAM223AQ8IWN6 122 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 KCNRGQ8N5I3 272 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 RNF152Q8N8N0 203 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 OR5T1Q8NG75 326 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 OR1S2Q8NGQ3 325 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 VN1R17PQ8TDU5 208 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 WFDC12Q8WWY7 111 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 CXorf58Q96LI9 332 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 OR4C12Q96R67 309 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 SERTAD4Q9NUC0 356 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 PAIP2BQ9ULR5 123 aaKnown RBP8.37□□□□□ -1.07
RTF1-202ENST00000462276 HSPB11Q9Y547 144 aa8.37□□□□□ -1.07
RTF1-202ENST00000462276 FBN3Q75N90 2809 aa8.36□□□□□ -1.07
RTF1-202ENST00000462276 IGSF23A1L1A6 192 aa8.36□□□□□ -1.07
RTF1-202ENST00000462276 PSMB11A5LHX3 300 aa8.36□□□□□ -1.07
RTF1-202ENST00000462276 CST7O76096 145 aa8.36□□□□□ -1.07
RTF1-202ENST00000462276 APELAP0DMC3 54 aa8.36□□□□□ -1.07
RTF1-202ENST00000462276 EIF5AP63241 154 aaKnown RBP8.36□□□□□ -1.07
RTF1-202ENST00000462276 DLK1P80370 383 aa8.36□□□□□ -1.07
RTF1-202ENST00000462276 CD300CQ08708 224 aa8.36□□□□□ -1.07
RTF1-202ENST00000462276 TMEM170AQ8WVE7 144 aa8.36□□□□□ -1.07
RTF1-202ENST00000462276 NOL4LQ96MY1 436 aaPredicted RBP8.36□□□□□ -1.07
RTF1-202ENST00000462276 FANCD2OSQ96PS1 177 aa8.36□□□□□ -1.07
RTF1-202ENST00000462276 TXN2Q99757 166 aa8.36□□□□□ -1.07
RTF1-202ENST00000462276 ZNF355PQ9NSJ1 428 aa8.36□□□□□ -1.07
RTF1-202ENST00000462276 PLXNB1O43157 2135 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 CLPSL1A2RUU4 121 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 RNF222A6NCQ9 220 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 PMS2P5A8MQ11 134 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 SCGB2A1O75556 95 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 REG1AP05451 166 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 PSMB8P28062 276 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 FCGR2BP31994 310 aaPredicted RBP8.35□□□□□ -1.07
RTF1-202ENST00000462276 OPRK1P41145 380 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 RHOGP84095 191 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 CD69Q07108 199 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 SLC38A11Q08AI6 406 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 FOXL1Q12952 345 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 ZNF266Q14584 549 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 OR8G2PQ6IF36 304 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 TMEM116Q8NCL8 245 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 LINC01006Q8NI28 216 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 MISP3Q96FF7 219 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 TMEM147Q9BVK8 224 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 FBXL7Q9UJT9 491 aa8.35□□□□□ -1.07
RTF1-202ENST00000462276 TRBV7-1A0A0A6YYK4 115 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 BORCS7-ASMTA0A0B4J1R7 106 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 KANTRA0A1W2PQU2 76 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 PRSS46E5RG02 174 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 I3L2K1 104 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 SOX15O60248 233 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 MPDU1O75352 247 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 JTBO76095 146 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 MT-CO2P00403 227 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 IFNA5P01569 189 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 TRGV3P03979 118 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 PF4V1P10720 104 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 NPBWR1P48145 328 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 EIF2B2P49770 351 aaKnown RBP8.34□□□□□ -1.07
RTF1-202ENST00000462276 RAB9AP51151 201 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 MFAP2P55001 183 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 MFAP4P55083 255 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 NHLH2Q02577 135 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 ATP5G2Q06055 141 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 RAB31Q13636 194 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 VWC2Q2TAL6 325 aa8.34□□□□□ -1.07
RTF1-202ENST00000462276 TMEM144Q7Z5S9 345 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms