RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 RBP4P02753 201 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 PRSS2P07478 247 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 OR8U9P0C7N5 309 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 PGAM2P15259 253 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 CD34P28906 385 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 GNRHRP30968 328 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 RAB25P57735 213 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 KRTAP10-11P60412 298 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 ARF6P62330 175 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 LOXL1Q08397 574 aaPredicted RBP3.66□□□□□ -1.82
CSMD3-205ENST00000462254 SURF2Q15527 256 aaPredicted RBP3.66□□□□□ -1.82
CSMD3-205ENST00000462254 TMEM30BQ3MIR4 351 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 CT45A1Q5HYN5 189 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 HCP5Q6MZN7 132 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 VMO1Q7Z5L0 202 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 CIARTQ8N365 385 aaPredicted RBP3.66□□□□□ -1.82
CSMD3-205ENST00000462254 DRAM1Q8N682 238 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 OR10G8Q8NGN5 311 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 OR8U1Q8NH10 309 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 CT45A3Q8NHU0 189 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 ABHD14BQ96IU4 210 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 TBX15Q96SF7 602 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 FOXC2Q99958 501 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 SLC25A21Q9BQT8 299 aaPredicted RBP3.66□□□□□ -1.82
CSMD3-205ENST00000462254 SEC22CQ9BRL7 303 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 AGMATQ9BSE5 352 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 RTBDNQ9BSG5 229 aaPredicted RBP3.66□□□□□ -1.82
CSMD3-205ENST00000462254 SUCNR1Q9BXA5 334 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 BEX2Q9BXY8 128 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 REG4Q9BYZ8 158 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 OR2D2Q9H210 308 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 TMEM133Q9H2Q1 129 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 IFI27L2Q9H2X8 130 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 BEX1Q9HBH7 125 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 SIRT7Q9NRC8 400 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 CCL28Q9NRJ3 127 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 COPZ2Q9P299 210 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 PSG11Q9UQ72 335 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 INSIG2Q9Y5U4 225 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 PUS1Q9Y606 427 aaKnown RBP eCLIP3.66□□□□□ -1.82
CSMD3-205ENST00000462254 AKAP9Q99996 3911 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 UNC79Q9P2D8 2635 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 ZANQ9Y493 2812 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 ZNF469Q96JG9 3925 aaPredicted RBP3.65□□□□□ -1.82
CSMD3-205ENST00000462254 BAHCC1Q9P281 2608 aa3.65□□□□□ -1.82
CSMD3-205ENST00000462254 HECTD1Q9ULT8 2610 aa3.65□□□□□ -1.82
CSMD3-205ENST00000462254 SAA2-SAA4A0A096LPE2 208 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 IGHV2-26A0A0B4J1V2 119 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 C7orf66A4D0T2 115 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 MSGN1A6NI15 193 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 CRYM-AS1A6NIL9 109 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 INMT-MINDY4F8WBC2 141 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 TOMM40O96008 361 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 IGLV1-47P01700 117 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 CTSDP07339 412 aaPredicted RBP3.65□□□□□ -1.83
CSMD3-205ENST00000462254 MSMBP08118 114 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 OR4E1P0C645 316 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 SAA2P0DJI9 122 aaPredicted RBP3.65□□□□□ -1.83
CSMD3-205ENST00000462254 DVL1P1P54792 670 aaPredicted RBP3.65□□□□□ -1.83
CSMD3-205ENST00000462254 PIGPP57054 158 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 UBE2MP61081 183 aaKnown RBP3.65□□□□□ -1.83
CSMD3-205ENST00000462254 RND3P61587 244 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 SUPT4H1P63272 117 aaKnown RBP3.65□□□□□ -1.83
CSMD3-205ENST00000462254 DHODHQ02127 395 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 PAX8Q06710 450 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 ARL16Q0P5N6 197 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 PPP1R1AQ13522 171 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 EIF4EBP1Q13541 118 aaPredicted RBP3.65□□□□□ -1.83
CSMD3-205ENST00000462254 DIAPH2-AS1Q14236 149 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 TWIST1Q15672 202 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 TMEM249Q2WGJ8 235 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 RPL39P5Q59GN2 51 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 SOHLH1Q5JUK2 328 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 LDLRAD2Q5SZI1 272 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 TMED4Q7Z7H5 227 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 SLC25A42Q86VD7 318 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 ABHD12Q8N2K0 398 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 PNKDQ8N490 385 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 LINC00311Q8N616 119 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 ZNF645Q8N7E2 425 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 ZFAND1Q8TCF1 268 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 PCNPQ8WW12 178 aaKnown RBP3.65□□□□□ -1.83
CSMD3-205ENST00000462254 ISOC2Q96AB3 205 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 RBMXL1Q96E39 390 aaKnown RBP3.65□□□□□ -1.83
CSMD3-205ENST00000462254 ST6GAL2Q96JF0 529 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 ZNF251Q9BRH9 671 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 ALX4Q9H161 411 aaPredicted RBP3.65□□□□□ -1.83
CSMD3-205ENST00000462254 SLC2A9Q9NRM0 540 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 SDHAF2Q9NX18 166 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 C14orf166Q9Y224 244 aaKnown RBP3.65□□□□□ -1.83
CSMD3-205ENST00000462254 RBM7Q9Y580 266 aaKnown RBP3.65□□□□□ -1.83
CSMD3-205ENST00000462254 ALG5Q9Y673 324 aa3.65□□□□□ -1.83
CSMD3-205ENST00000462254 MAP1AP78559 2803 aaPredicted RBP3.65□□□□□ -1.83
CSMD3-205ENST00000462254 TEX15Q9BXT5 2789 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 CSPG4Q6UVK1 2322 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 TRAV40A0A0B4J280 105 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 A0A1W2PRF3 423 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 A0A1W2PRM7 423 aa3.64□□□□□ -1.83
CSMD3-205ENST00000462254 C9orf170A2RU37 121 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms