RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 GDPD1Q8N9F7 314 aa3.62□□□□□ -1.83
BRCA1-206ENST00000461574 DMBX1Q8NFW5 382 aa3.62□□□□□ -1.83
BRCA1-206ENST00000461574 GINS3Q9BRX5 216 aa3.62□□□□□ -1.83
BRCA1-206ENST00000461574 C1orf43Q9BWL3 253 aa3.62□□□□□ -1.83
BRCA1-206ENST00000461574 HINT2Q9BX68 163 aa3.62□□□□□ -1.83
BRCA1-206ENST00000461574 QTRT1Q9BXR0 403 aaKnown RBP3.62□□□□□ -1.83
BRCA1-206ENST00000461574 RNF167Q9H6Y7 350 aa3.62□□□□□ -1.83
BRCA1-206ENST00000461574 TMEM14BQ9NUH8 114 aa3.62□□□□□ -1.83
BRCA1-206ENST00000461574 SMPXQ9UHP9 88 aa3.62□□□□□ -1.83
BRCA1-206ENST00000461574 RABAC1Q9UI14 185 aa3.62□□□□□ -1.83
BRCA1-206ENST00000461574 CELA1Q9UNI1 258 aa3.62□□□□□ -1.83
BRCA1-206ENST00000461574 RBMX2Q9Y388 322 aaKnown RBP3.62□□□□□ -1.83
BRCA1-206ENST00000461574 TMED3Q9Y3Q3 217 aa3.62□□□□□ -1.83
BRCA1-206ENST00000461574 NACAE9PAV3 2078 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 AGRNO00468 2067 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 TRAV14DV4A0A0A6YYC5 116 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 IGLC7A0M8Q6 106 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 FOXI3A8MTJ6 420 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-206ENST00000461574 FAM25EA8MYX2 175 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 SLC17A2O00624 439 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 TNFSF12O43508 249 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 ATP8B1O43520 1251 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 CD5P06127 495 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 OR13C7P0DN81 318 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 HTN3P15516 51 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 GNB3P16520 340 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 NFYAP23511 347 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-206ENST00000461574 TMEM50BP56557 158 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 CLDN12P56749 244 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 RPL30P62888 115 aaKnown RBP3.61□□□□□ -1.83
BRCA1-206ENST00000461574 IRF3Q14653 427 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 C12orf74Q32Q52 190 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 ZFP1Q6P2D0 407 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 Q6ZR54 194 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 AHSA2Q719I0 299 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 HSD17B13Q7Z5P4 300 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-206ENST00000461574 OR10W1Q8NGF6 305 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 CYGBQ8WWM9 190 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 FAM3DQ96BQ1 224 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 SRSF8Q9BRL6 282 aaKnown RBP3.61□□□□□ -1.83
BRCA1-206ENST00000461574 ATG101Q9BSB4 218 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 MS4A6AQ9H2W1 248 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 TMEM231Q9H6L2 316 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 CLEC5AQ9NY25 188 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 BET1LQ9NYM9 111 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 AK6Q9Y3D8 172 aaKnown RBP3.61□□□□□ -1.83
BRCA1-206ENST00000461574 OR2W1Q9Y3N9 320 aa3.61□□□□□ -1.83
BRCA1-206ENST00000461574 IGHV3-66A0A0C4DH42 116 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 ZNF705EA8MWA4 302 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-206ENST00000461574 EPM2AB3EWF7 344 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 GNG7O60262 68 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 ARL6IP5O75915 188 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 CD74P04233 296 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 SERPINE2P07093 398 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 CTXN2P0C2S0 81 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 ZNF688P0C7X2 276 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 SPART-AS1P0CW21 52 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 TRAPPC2P0DI81 140 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 TRAPPC2BP0DI82 140 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 NQO2P16083 231 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 HIST1H1DP16402 221 aaKnown RBP3.6□□□□□ -1.83
BRCA1-206ENST00000461574 C4BPBP20851 252 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 EMP1P54849 157 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 ERVK-16P61578 105 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 CATR1Q13166 79 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 RCN1Q15293 331 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 KLK9Q2XQG4 91 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 C2orf76Q3KRA6 126 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 RNF212Q495C1 297 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 ACTL10Q5JWF8 245 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 THOC7Q6I9Y2 204 aaKnown RBP3.6□□□□□ -1.83
BRCA1-206ENST00000461574 ZNF367Q7RTV3 350 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 TRPT1Q86TN4 253 aaKnown RBP3.6□□□□□ -1.83
BRCA1-206ENST00000461574 SPAG16Q8N0X2 631 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 ZNF485Q8NCK3 441 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 STXBP6Q8NFX7 210 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 OR10R2Q8NGX6 335 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 SECTM1Q8WVN6 248 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 LSM10Q969L4 123 aaKnown RBP3.6□□□□□ -1.83
BRCA1-206ENST00000461574 TMEM203Q969S6 136 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 ATP6V0BQ99437 205 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 SCRT1Q9BWW7 348 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 C1QTNF4Q9BXJ3 329 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 RABL2AQ9UBK7 228 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-206ENST00000461574 KLK9Q9UKQ9 250 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 RAB22AQ9UL26 194 aa3.6□□□□□ -1.83
BRCA1-206ENST00000461574 IGHV3OR16-12A0A075B7B8 117 aa3.59□□□□□ -1.83
BRCA1-206ENST00000461574 IGKV1D-8A0A087WSZ0 117 aa3.59□□□□□ -1.83
BRCA1-206ENST00000461574 TRAV2A0A0B4J234 112 aa3.59□□□□□ -1.83
BRCA1-206ENST00000461574 TRAV3A0A0B4J244 114 aa3.59□□□□□ -1.83
BRCA1-206ENST00000461574 IGKV1D-13A0A0B4J2D9 117 aa3.59□□□□□ -1.83
BRCA1-206ENST00000461574 TMEM272A0A1B0GTI8 110 aa3.59□□□□□ -1.83
BRCA1-206ENST00000461574 TEX48A0A1B0GUV7 120 aa3.59□□□□□ -1.83
BRCA1-206ENST00000461574 METTL21EPA6NDL7 271 aa3.59□□□□□ -1.83
BRCA1-206ENST00000461574 KNCNA6PVL3 124 aa3.59□□□□□ -1.83
BRCA1-206ENST00000461574 SULT1C2O00338 296 aa3.59□□□□□ -1.83
BRCA1-206ENST00000461574 UPK2O00526 184 aa3.59□□□□□ -1.83
BRCA1-206ENST00000461574 MFNGO00587 321 aa3.59□□□□□ -1.83
BRCA1-206ENST00000461574 HPRT1P00492 218 aa3.59□□□□□ -1.83
BRCA1-206ENST00000461574 HLA-DQB1P01920 261 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms