RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 C14orf105Q9NVL8 296 aa1.33□□□□□ -2.2
VCL-203ENST00000461383 COL11A1P12107 1806 aaPredicted RBP1.33□□□□□ -2.2
VCL-203ENST00000461383 NCOA1Q15788 1441 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 TRGV2A0A075B6R0 118 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 hCG_1818297A0A087WSY0 165 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 OR51F1A6NGY5 319 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 A8MT66 165 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 ZNF737O75373 536 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 NAPSAO96009 420 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 IGKV1-5P01602 117 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 C1QCP02747 245 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 HSD11B1P28845 292 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 MOGQ16653 247 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 LIN52Q52LA3 116 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 C7orf65Q6ZTY9 151 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 OOSP2Q86WS3 158 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 COA5Q86WW8 74 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 CLVS1Q8IUQ0 354 aaPredicted RBP1.32□□□□□ -2.2
VCL-203ENST00000461383 LINC00471Q8N535 108 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 OR8B3Q8NGG8 313 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 CEP19Q96LK0 163 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 PSTPIP2Q9H939 334 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 UQCC1Q9NVA1 299 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 CKLFQ9UBR5 152 aa1.32□□□□□ -2.2
VCL-203ENST00000461383 FAM32AQ9Y421 112 aaKnown RBP1.32□□□□□ -2.2
VCL-203ENST00000461383 ZFHX2Q9C0A1 2572 aaPredicted RBP1.32□□□□□ -2.2
VCL-203ENST00000461383 COL5A3P25940 1745 aaPredicted RBP1.32□□□□□ -2.2
VCL-203ENST00000461383 SCAF11Q99590 1463 aaKnown RBP1.31□□□□□ -2.2
VCL-203ENST00000461383 INTS1Q8N201 2190 aaKnown RBP1.31□□□□□ -2.2
VCL-203ENST00000461383 SORL1Q92673 2214 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 IGKV1D-43A0A0B4J1Z2 117 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 TRAPPC2LH3BP13 241 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 HAND1O96004 215 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 SERPINA1P01009 418 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 PMP2P02689 132 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 CRPP02741 224 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 SERPINE1P05121 402 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 UBBP0CG47 229 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 SMIM17P0DL12 118 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 AKR1C3P42330 323 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 MAGEA12P43365 314 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 ERVS71-1P61550 626 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 ELOBQ15370 118 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 KISS1Q15726 138 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 KRTAP13-4Q3LI77 160 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 PCOTHQ58A44 107 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 MIR17HGQ75NE6 70 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 TRAPPC6BQ86SZ2 158 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 RPS19BP1Q86WX3 136 aaKnown RBP1.31□□□□□ -2.2
VCL-203ENST00000461383 ZNF439Q8NDP4 499 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 SPACA4Q8TDM5 124 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 HSPB9Q9BQS6 159 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 C20orf27Q9GZN8 174 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 TLNRD1Q9H1K6 362 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 ENY2Q9NPA8 101 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 TP73-AS1Q9UF72 201 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 BAIAP2Q9UQB8 552 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 ERGIC3Q9Y282 383 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 RTL1A6NKG5 1358 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 CCDC144AA2RUR9 1427 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 PIK3C2GO75747 1445 aa1.31□□□□□ -2.2
VCL-203ENST00000461383 HECW2Q9P2P5 1572 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 CIAO1O76071 339 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 OR7C1O76099 320 aaPredicted RBP1.3□□□□□ -2.2
VCL-203ENST00000461383 C8GP07360 202 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 SMIM10L2AP0DMW4 78 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 SMIM10L2BP0DMW5 78 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 PPIBP23284 216 aaKnown RBP1.3□□□□□ -2.2
VCL-203ENST00000461383 CASP1P29466 404 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 ZNF80P51504 273 aaPredicted RBP1.3□□□□□ -2.2
VCL-203ENST00000461383 RUNX1Q01196 453 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 ARHGAP11BQ3KRB8 267 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 KHDC3LQ587J8 217 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 FAM173BQ6P4H8 233 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 DHFR2Q86XF0 187 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 HIST3H2BBQ8N257 126 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 MBD3L1Q8WWY6 194 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 ZNF625Q96I27 306 aaPredicted RBP1.3□□□□□ -2.2
VCL-203ENST00000461383 RNASE7Q9H1E1 156 aaKnown RBP1.3□□□□□ -2.2
VCL-203ENST00000461383 IDI2-AS1Q9NZ38 188 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 BRWD1Q9NSI6 2320 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 KIF1BO60333 1816 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 TTC21AQ8NDW8 1320 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 MYH7BA7E2Y1 1941 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 ANAPC1Q9H1A4 1944 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 VWDEQ8N2E2 1590 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 SDK1Q7Z5N4 2213 aa1.3□□□□□ -2.2
VCL-203ENST00000461383 HECW1Q76N89 1606 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 A0A0D9SG52 128 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 F8W036 122 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 J3QRK9 145 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 HTR1AP08908 422 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 GPX2P18283 190 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 ERP29P30040 261 aaKnown RBP1.29□□□□□ -2.2
VCL-203ENST00000461383 DEFA3P59666 94 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 RHOBP62745 196 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 ZNF345Q14585 488 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 C12orf74Q32Q52 190 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 LCN15Q6UWW0 184 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 OR4E2Q8NGC2 313 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms