RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 GALNT14Q96FL9 552 aa17.01■□□□□ 0.31
TRAF4-207ENST00000461195 GAR1Q9NY12 217 aaKnown RBP17.01■□□□□ 0.31
TRAF4-207ENST00000461195 UFC1Q9Y3C8 167 aa17.01■□□□□ 0.31
TRAF4-207ENST00000461195 TMEM56-RWDD3S4R434 201 aa17.01■□□□□ 0.31
TRAF4-207ENST00000461195 RYR3Q15413 4870 aa17.01■□□□□ 0.31
TRAF4-207ENST00000461195 F8W735 103 aaPredicted RBP17■□□□□ 0.31
TRAF4-207ENST00000461195 I3L2K1 104 aa17■□□□□ 0.31
TRAF4-207ENST00000461195 IGHV4-30-4P0DP06 118 aa17■□□□□ 0.31
TRAF4-207ENST00000461195 HOXA1P49639 335 aaPredicted RBP17■□□□□ 0.31
TRAF4-207ENST00000461195 TM4SF20Q53R12 229 aa17■□□□□ 0.31
TRAF4-207ENST00000461195 Q6ZRM9 215 aa17■□□□□ 0.31
TRAF4-207ENST00000461195 DEDD2Q8WXF8 326 aa17■□□□□ 0.31
TRAF4-207ENST00000461195 ENY2Q9NPA8 101 aa17■□□□□ 0.31
TRAF4-207ENST00000461195 CTNNBIP1Q9NSA3 81 aaPredicted RBP17■□□□□ 0.31
TRAF4-207ENST00000461195 MT-CO2P00403 227 aa16.99■□□□□ 0.31
TRAF4-207ENST00000461195 AKR1C4P17516 323 aa16.99■□□□□ 0.31
TRAF4-207ENST00000461195 MFAP4P55083 255 aa16.99■□□□□ 0.31
TRAF4-207ENST00000461195 ELLP55199 621 aaPredicted RBP16.99■□□□□ 0.31
TRAF4-207ENST00000461195 TMEM187Q14656 261 aa16.99■□□□□ 0.31
TRAF4-207ENST00000461195 UXS1Q8NBZ7 420 aa16.99■□□□□ 0.31
TRAF4-207ENST00000461195 IL22RA2Q969J5 263 aa16.99■□□□□ 0.31
TRAF4-207ENST00000461195 MARC2Q969Z3 335 aa16.99■□□□□ 0.31
TRAF4-207ENST00000461195 CHRDL1Q9BU40 450 aa16.99■□□□□ 0.31
TRAF4-207ENST00000461195 NDUFA13Q9P0J0 144 aa16.99■□□□□ 0.31
TRAF4-207ENST00000461195 ZNF785A8K8V0 405 aa16.98■□□□□ 0.31
TRAF4-207ENST00000461195 A8MZ25 164 aa16.98■□□□□ 0.31
TRAF4-207ENST00000461195 SUB1P53999 127 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRAF4-207ENST00000461195 SPCS3P61009 180 aa16.98■□□□□ 0.31
TRAF4-207ENST00000461195 AARDQ4LEZ3 155 aa16.98■□□□□ 0.31
TRAF4-207ENST00000461195 ZNF57Q68EA5 555 aaPredicted RBP16.98■□□□□ 0.31
TRAF4-207ENST00000461195 SBSPONQ8IVN8 264 aa16.98■□□□□ 0.31
TRAF4-207ENST00000461195 TMEM190Q8WZ59 177 aa16.98■□□□□ 0.31
TRAF4-207ENST00000461195 PINX1Q96BK5 328 aaKnown RBP16.98■□□□□ 0.31
TRAF4-207ENST00000461195 GPR146Q96CH1 333 aa16.98■□□□□ 0.31
TRAF4-207ENST00000461195 TXN2Q99757 166 aa16.98■□□□□ 0.31
TRAF4-207ENST00000461195 SRRQ9GZT4 340 aa16.98■□□□□ 0.31
TRAF4-207ENST00000461195 CACNG5Q9UF02 275 aa16.98■□□□□ 0.31
TRAF4-207ENST00000461195 U3KQK5 164 aa16.98■□□□□ 0.31
TRAF4-207ENST00000461195 NDUFA4O00483 81 aa16.97■□□□□ 0.31
TRAF4-207ENST00000461195 ANXA3P12429 323 aa16.97■□□□□ 0.31
TRAF4-207ENST00000461195 FCGR2BP31994 310 aaPredicted RBP16.97■□□□□ 0.31
TRAF4-207ENST00000461195 ADMP35318 185 aa16.97■□□□□ 0.31
TRAF4-207ENST00000461195 OR52E5Q8NH55 327 aa16.97■□□□□ 0.31
TRAF4-207ENST00000461195 C19orf73Q9NVV2 129 aa16.97■□□□□ 0.31
TRAF4-207ENST00000461195 MRPL27Q9P0M9 148 aaKnown RBP16.97■□□□□ 0.31
TRAF4-207ENST00000461195 MLXQ9UH92 298 aa16.97■□□□□ 0.31
TRAF4-207ENST00000461195 NUPL2O15504 423 aaKnown RBP16.96■□□□□ 0.31
TRAF4-207ENST00000461195 CTSGP08311 255 aa16.96■□□□□ 0.31
TRAF4-207ENST00000461195 C8orf88P0DMB2 117 aa16.96■□□□□ 0.31
TRAF4-207ENST00000461195 SUPT4H1P63272 117 aaKnown RBP16.96■□□□□ 0.31
TRAF4-207ENST00000461195 GUCA2BQ16661 112 aa16.96■□□□□ 0.31
TRAF4-207ENST00000461195 SLC25A21Q9BQT8 299 aaPredicted RBP16.96■□□□□ 0.31
TRAF4-207ENST00000461195 PRR13Q9NZ81 148 aa16.96■□□□□ 0.31
TRAF4-207ENST00000461195 CORTO00230 105 aa16.95■□□□□ 0.3
TRAF4-207ENST00000461195 IGHV3-48P01763 117 aa16.95■□□□□ 0.3
TRAF4-207ENST00000461195 RNASE2P10153 161 aaKnown RBP16.95■□□□□ 0.3
TRAF4-207ENST00000461195 CD81P60033 236 aa16.95■□□□□ 0.3
TRAF4-207ENST00000461195 RELQ04864 619 aaPredicted RBP16.95■□□□□ 0.3
TRAF4-207ENST00000461195 PVRIGQ6DKI7 326 aa16.95■□□□□ 0.3
TRAF4-207ENST00000461195 BTNL8Q6UX41 500 aa16.95■□□□□ 0.3
TRAF4-207ENST00000461195 TMED4Q7Z7H5 227 aa16.95■□□□□ 0.3
TRAF4-207ENST00000461195 TMEM61Q8N0U2 210 aa16.95■□□□□ 0.3
TRAF4-207ENST00000461195 WDR89Q96FK6 387 aaPredicted RBP16.95■□□□□ 0.3
TRAF4-207ENST00000461195 DAZ1Q9NQZ3 744 aaKnown RBP16.95■□□□□ 0.3
TRAF4-207ENST00000461195 SELENOKQ9Y6D0 94 aa16.95■□□□□ 0.3
TRAF4-207ENST00000461195 GNG7O60262 68 aa16.94■□□□□ 0.3
TRAF4-207ENST00000461195 SRPXP78539 464 aa16.94■□□□□ 0.3
TRAF4-207ENST00000461195 LGI3Q8N145 548 aa16.94■□□□□ 0.3
TRAF4-207ENST00000461195 NEURL2Q9BR09 285 aa16.94■□□□□ 0.3
TRAF4-207ENST00000461195 C20orf24Q9BUV8 137 aa16.94■□□□□ 0.3
TRAF4-207ENST00000461195 TUBA4BQ9H853 241 aa16.94■□□□□ 0.3
TRAF4-207ENST00000461195 CACFD1Q9UGQ2 172 aa16.94■□□□□ 0.3
TRAF4-207ENST00000461195 A0A0B4J2A0 478 aa16.93■□□□□ 0.3
TRAF4-207ENST00000461195 SULT1A3P0DMM9 295 aa16.93■□□□□ 0.3
TRAF4-207ENST00000461195 SULT1A4P0DMN0 295 aa16.93■□□□□ 0.3
TRAF4-207ENST00000461195 INPP1P49441 399 aa16.93■□□□□ 0.3
TRAF4-207ENST00000461195 TMEM128Q5BJH2 165 aa16.93■□□□□ 0.3
TRAF4-207ENST00000461195 DUSP18Q8NEJ0 188 aa16.93■□□□□ 0.3
TRAF4-207ENST00000461195 WWC2-AS2Q96NR7 200 aa16.93■□□□□ 0.3
TRAF4-207ENST00000461195 SHPKQ9UHJ6 478 aa16.93■□□□□ 0.3
TRAF4-207ENST00000461195 PIGBOS1A0A0B4J2F0 54 aa16.92■□□□□ 0.3
TRAF4-207ENST00000461195 K7EMT4 169 aa16.92■□□□□ 0.3
TRAF4-207ENST00000461195 HTR2BP41595 481 aa16.92■□□□□ 0.3
TRAF4-207ENST00000461195 NPBWR1P48145 328 aa16.92■□□□□ 0.3
TRAF4-207ENST00000461195 BAK1Q16611 211 aa16.92■□□□□ 0.3
TRAF4-207ENST00000461195 BSXQ3C1V8 233 aa16.92■□□□□ 0.3
TRAF4-207ENST00000461195 TRIQKQ629K1 86 aa16.92■□□□□ 0.3
TRAF4-207ENST00000461195 LYZL2Q7Z4W2 148 aa16.92■□□□□ 0.3
TRAF4-207ENST00000461195 HEYLQ9NQ87 328 aaPredicted RBP16.92■□□□□ 0.3
TRAF4-207ENST00000461195 IGHV3OR16-8A0A075B7F1 116 aa16.91■□□□□ 0.3
TRAF4-207ENST00000461195 TRAV25A0A0B4J276 109 aa16.91■□□□□ 0.3
TRAF4-207ENST00000461195 C15orf62A8K5M9 175 aa16.91■□□□□ 0.3
TRAF4-207ENST00000461195 CEBPZOSA8MTT3 80 aa16.91■□□□□ 0.3
TRAF4-207ENST00000461195 CD7P09564 240 aa16.91■□□□□ 0.3
TRAF4-207ENST00000461195 CCR6P51684 374 aa16.91■□□□□ 0.3
TRAF4-207ENST00000461195 NMSQ5H8A3 153 aa16.91■□□□□ 0.3
TRAF4-207ENST00000461195 RBPMS2Q6ZRY4 209 aaKnown RBP16.91■□□□□ 0.3
TRAF4-207ENST00000461195 ZMAT4Q9H898 229 aa16.91■□□□□ 0.3
TRAF4-207ENST00000461195 YIF1AO95070 293 aa16.9■□□□□ 0.3
TRAF4-207ENST00000461195 SCAF4O95104 1147 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms