RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 Q6ZRM9 215 aa13.9□□□□□ -0.18
COL9A2-205ENST00000461118 SGPP2Q8IWX5 399 aa13.9□□□□□ -0.18
COL9A2-205ENST00000461118 SELENOHQ8IZQ5 122 aaKnown RBP13.9□□□□□ -0.18
COL9A2-205ENST00000461118 TOMM5Q8N4H5 51 aa13.9□□□□□ -0.18
COL9A2-205ENST00000461118 TMEM230Q96A57 120 aa13.9□□□□□ -0.18
COL9A2-205ENST00000461118 TM2D3Q9BRN9 247 aa13.9□□□□□ -0.18
COL9A2-205ENST00000461118 ZNF436Q9C0F3 470 aaPredicted RBP13.9□□□□□ -0.18
COL9A2-205ENST00000461118 TECRQ9NZ01 308 aaKnown RBP13.9□□□□□ -0.18
COL9A2-205ENST00000461118 NDUFA13Q9P0J0 144 aa13.9□□□□□ -0.18
COL9A2-205ENST00000461118 KCNIP3Q9Y2W7 256 aa13.9□□□□□ -0.18
COL9A2-205ENST00000461118 ZNF320A2RRD8 509 aa13.89□□□□□ -0.19
COL9A2-205ENST00000461118 TMEM213A2RRL7 107 aa13.89□□□□□ -0.19
COL9A2-205ENST00000461118 IZUMO1RA6ND01 250 aa13.89□□□□□ -0.19
COL9A2-205ENST00000461118 A8MZ25 164 aa13.89□□□□□ -0.19
COL9A2-205ENST00000461118 F8W735 103 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-205ENST00000461118 I3L2K1 104 aa13.89□□□□□ -0.19
COL9A2-205ENST00000461118 FCGR2BP31994 310 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-205ENST00000461118 ELLP55199 621 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-205ENST00000461118 CD300EQ496F6 205 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-205ENST00000461118 SPANXN2Q5MJ10 180 aa13.89□□□□□ -0.19
COL9A2-205ENST00000461118 IL22RA2Q969J5 263 aa13.89□□□□□ -0.19
COL9A2-205ENST00000461118 OR2T8A6NH00 312 aa13.88□□□□□ -0.19
COL9A2-205ENST00000461118 IFNA17P01571 189 aa13.88□□□□□ -0.19
COL9A2-205ENST00000461118 C8orf88P0DMB2 117 aa13.88□□□□□ -0.19
COL9A2-205ENST00000461118 TMEM187Q14656 261 aa13.88□□□□□ -0.19
COL9A2-205ENST00000461118 TMEM268Q5VZI3 342 aa13.88□□□□□ -0.19
COL9A2-205ENST00000461118 PVRIGQ6DKI7 326 aa13.88□□□□□ -0.19
COL9A2-205ENST00000461118 UNQ9165/PRO28630Q6UXU0 137 aa13.88□□□□□ -0.19
COL9A2-205ENST00000461118 SLC35G3Q8N808 338 aa13.88□□□□□ -0.19
COL9A2-205ENST00000461118 OR52E5Q8NH55 327 aa13.88□□□□□ -0.19
COL9A2-205ENST00000461118 TXN2Q99757 166 aa13.88□□□□□ -0.19
COL9A2-205ENST00000461118 PDCD10Q9BUL8 212 aa13.88□□□□□ -0.19
COL9A2-205ENST00000461118 PALMDQ9NP74 551 aa13.88□□□□□ -0.19
COL9A2-205ENST00000461118 ZC4H2Q9NQZ6 224 aa13.88□□□□□ -0.19
COL9A2-205ENST00000461118 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.88□□□□□ -0.19
COL9A2-205ENST00000461118 IGHV3-21A0A0B4J1V1 117 aa13.87□□□□□ -0.19
COL9A2-205ENST00000461118 ZNF785A8K8V0 405 aa13.87□□□□□ -0.19
COL9A2-205ENST00000461118 CTSGP08311 255 aa13.87□□□□□ -0.19
COL9A2-205ENST00000461118 EDN2P20800 178 aa13.87□□□□□ -0.19
COL9A2-205ENST00000461118 SNCAP37840 140 aa13.87□□□□□ -0.19
COL9A2-205ENST00000461118 SPINK9Q5DT21 86 aa13.87□□□□□ -0.19
COL9A2-205ENST00000461118 RNASE11Q8TAA1 199 aaKnown RBP13.87□□□□□ -0.19
COL9A2-205ENST00000461118 DYNLRB2Q8TF09 96 aa13.87□□□□□ -0.19
COL9A2-205ENST00000461118 MARC2Q969Z3 335 aa13.87□□□□□ -0.19
COL9A2-205ENST00000461118 MISP3Q96FF7 219 aa13.87□□□□□ -0.19
COL9A2-205ENST00000461118 CHRDL1Q9BU40 450 aa13.87□□□□□ -0.19
COL9A2-205ENST00000461118 SRRQ9GZT4 340 aa13.87□□□□□ -0.19
COL9A2-205ENST00000461118 ZMAT4Q9H898 229 aa13.87□□□□□ -0.19
COL9A2-205ENST00000461118 UFC1Q9Y3C8 167 aa13.87□□□□□ -0.19
COL9A2-205ENST00000461118 NDUFA4O00483 81 aa13.86□□□□□ -0.19
COL9A2-205ENST00000461118 AKR1C4P17516 323 aa13.86□□□□□ -0.19
COL9A2-205ENST00000461118 ADMP35318 185 aa13.86□□□□□ -0.19
COL9A2-205ENST00000461118 MFAP4P55083 255 aa13.86□□□□□ -0.19
COL9A2-205ENST00000461118 SPCS3P61009 180 aa13.86□□□□□ -0.19
COL9A2-205ENST00000461118 SUPT4H1P63272 117 aaKnown RBP13.86□□□□□ -0.19
COL9A2-205ENST00000461118 PLECQ15149 4684 aaKnown RBP13.86□□□□□ -0.19
COL9A2-205ENST00000461118 TM4SF20Q53R12 229 aa13.86□□□□□ -0.19
COL9A2-205ENST00000461118 UXS1Q8NBZ7 420 aa13.86□□□□□ -0.19
COL9A2-205ENST00000461118 TMEM190Q8WZ59 177 aa13.86□□□□□ -0.19
COL9A2-205ENST00000461118 GPR146Q96CH1 333 aa13.86□□□□□ -0.19
COL9A2-205ENST00000461118 SLC25A21Q9BQT8 299 aaPredicted RBP13.86□□□□□ -0.19
COL9A2-205ENST00000461118 C19orf73Q9NVV2 129 aa13.86□□□□□ -0.19
COL9A2-205ENST00000461118 MRPL27Q9P0M9 148 aaKnown RBP13.86□□□□□ -0.19
COL9A2-205ENST00000461118 IGHV3-35A0A0C4DH35 117 aa13.85□□□□□ -0.19
COL9A2-205ENST00000461118 MT-CO2P00403 227 aa13.85□□□□□ -0.19
COL9A2-205ENST00000461118 IGHV4-30-4P0DP06 118 aa13.85□□□□□ -0.19
COL9A2-205ENST00000461118 SUB1P53999 127 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL9A2-205ENST00000461118 Q56UQ5 140 aa13.85□□□□□ -0.19
COL9A2-205ENST00000461118 GTSCR1Q86UQ5 136 aa13.85□□□□□ -0.19
COL9A2-205ENST00000461118 CACNG8Q8WXS5 425 aa13.85□□□□□ -0.19
COL9A2-205ENST00000461118 CACFD1Q9UGQ2 172 aa13.85□□□□□ -0.19
COL9A2-205ENST00000461118 A0A0B4J2A0 478 aa13.84□□□□□ -0.19
COL9A2-205ENST00000461118 RNASE2P10153 161 aaKnown RBP13.84□□□□□ -0.19
COL9A2-205ENST00000461118 BSXQ3C1V8 233 aa13.84□□□□□ -0.19
COL9A2-205ENST00000461118 UBAC2Q8NBM4 344 aa13.84□□□□□ -0.19
COL9A2-205ENST00000461118 ENY2Q9NPA8 101 aa13.84□□□□□ -0.19
COL9A2-205ENST00000461118 CACNG5Q9UF02 275 aa13.84□□□□□ -0.19
COL9A2-205ENST00000461118 MLXQ9UH92 298 aa13.84□□□□□ -0.19
COL9A2-205ENST00000461118 SHPKQ9UHJ6 478 aa13.84□□□□□ -0.19
COL9A2-205ENST00000461118 K7EMT4 169 aa13.83□□□□□ -0.2
COL9A2-205ENST00000461118 CORTO00230 105 aa13.83□□□□□ -0.2
COL9A2-205ENST00000461118 ANXA3P12429 323 aa13.83□□□□□ -0.2
COL9A2-205ENST00000461118 HOXA1P49639 335 aaPredicted RBP13.83□□□□□ -0.2
COL9A2-205ENST00000461118 SRPXP78539 464 aa13.83□□□□□ -0.2
COL9A2-205ENST00000461118 TMEM128Q5BJH2 165 aa13.83□□□□□ -0.2
COL9A2-205ENST00000461118 ZNF57Q68EA5 555 aaPredicted RBP13.83□□□□□ -0.2
COL9A2-205ENST00000461118 ZNF414Q96IQ9 312 aa13.83□□□□□ -0.2
COL9A2-205ENST00000461118 DAZ1Q9NQZ3 744 aaKnown RBP13.83□□□□□ -0.2
COL9A2-205ENST00000461118 TRAV25A0A0B4J276 109 aa13.82□□□□□ -0.2
COL9A2-205ENST00000461118 PIGBOS1A0A0B4J2F0 54 aa13.82□□□□□ -0.2
COL9A2-205ENST00000461118 NUPL2O15504 423 aaKnown RBP13.82□□□□□ -0.2
COL9A2-205ENST00000461118 RELQ04864 619 aaPredicted RBP13.82□□□□□ -0.2
COL9A2-205ENST00000461118 BAK1Q16611 211 aa13.82□□□□□ -0.2
COL9A2-205ENST00000461118 NMSQ5H8A3 153 aa13.82□□□□□ -0.2
COL9A2-205ENST00000461118 TMEM61Q8N0U2 210 aa13.82□□□□□ -0.2
COL9A2-205ENST00000461118 LGI3Q8N145 548 aa13.82□□□□□ -0.2
COL9A2-205ENST00000461118 PINX1Q96BK5 328 aaKnown RBP13.82□□□□□ -0.2
COL9A2-205ENST00000461118 WDR89Q96FK6 387 aaPredicted RBP13.82□□□□□ -0.2
COL9A2-205ENST00000461118 PRR13Q9NZ81 148 aa13.82□□□□□ -0.2
COL9A2-205ENST00000461118 C15orf62A8K5M9 175 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms