RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 CD177Q8N6Q3 437 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 SSMEM1Q8WWF3 244 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 NEUROG1Q92886 237 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 KCNS1Q96KK3 526 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 DCTN5Q9BTE1 182 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 TMEM140Q9NV12 185 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 ZNF586Q9NXT0 402 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 FOXA2Q9Y261 457 aaPredicted RBP6.98□□□□□ -1.29
VPS50-208ENST00000458707 TBL2Q9Y4P3 447 aaKnown RBP6.98□□□□□ -1.29
VPS50-208ENST00000458707 ZNF318Q5VUA4 2279 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 FRYQ5TBA9 3013 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 HELTA6NFD8 242 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 C21orf140B9A014 251 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 DIRC3C9JPN6 131 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 M0R1X1 148 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 F2RL2O00254 374 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 ISLRO14498 428 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 ZNF253O75346 499 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 FOXH1O75593 365 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 CGAP01215 116 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 IGKV3-15P01624 115 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 OR5G3P0C626 314 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 LINC00869P0C866 280 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 PF4V1P10720 104 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 NPY1RP25929 384 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 GNG4P50150 75 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 CRYBA4P53673 196 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 LOXL3P58215 753 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 CENPWQ5EE01 88 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 LDLRAD2Q5SZI1 272 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 SAMD13Q5VXD3 122 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 LINC00696Q6ZRV3 163 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 VKORC1L1Q8N0U8 176 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 TMEM105Q8N8V8 129 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 OR4P4Q8NGL7 312 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 FAM110AQ9BQ89 295 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 IFI27L2Q9H2X8 130 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 NRN1Q9NPD7 142 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 TMEM167BQ9NRX6 74 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 TMEM14BQ9NUH8 114 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 SPRR3Q9UBC9 169 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 TNCP24821 2201 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 SETXQ7Z333 2677 aaKnown RBP6.97□□□□□ -1.29
VPS50-208ENST00000458707 SMIM27A0A1W2PRY6 76 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 A0A1W2PS18 150 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 HLA-DQA1P01909 254 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 TFPI2P48307 235 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 ZNF134P52741 427 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 ADIPOQQ15848 244 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 PRR27Q6MZM9 219 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 MTURNQ8N3F0 131 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 PNKDQ8N490 385 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 TMEM186Q96B77 213 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 S1PR3Q99500 378 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 GNG12Q9UBI6 72 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 PEF1Q9UBV8 284 aaKnown RBP6.97□□□□□ -1.29
VPS50-208ENST00000458707 NAT8BQ9UHF3 227 aa6.97□□□□□ -1.29
VPS50-208ENST00000458707 INTS1Q8N201 2190 aaKnown RBP6.96□□□□□ -1.29
VPS50-208ENST00000458707 TRGV5A0A0B4J1U4 118 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 LYZL6O75951 148 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 IGLV2-8P01709 118 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 AMY1AP04745 511 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 PRDX2P32119 198 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 NBL1P41271 181 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 ZNF83P51522 516 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 HSPE1P61604 102 aaKnown RBP6.96□□□□□ -1.29
VPS50-208ENST00000458707 POU2AF1Q16633 256 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 RTL8BQ17RB0 113 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 RPL39P5Q59GN2 51 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 PQLC2Q6ZP29 291 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 MIR17HGQ75NE6 70 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 ZNF503Q96F45 646 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 UQCR10Q9UDW1 63 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 AHCTF1Q8WYP5 2266 aa6.96□□□□□ -1.29
VPS50-208ENST00000458707 IGKV1D-17A0A075B6S4 117 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 SRRM5B3KS81 715 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 BMPR1BO00238 502 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 MGST3O14880 152 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 ZNF324O75467 553 aaPredicted RBP6.96□□□□□ -1.3
VPS50-208ENST00000458707 CA2P00918 260 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 CGB3P0DN86 165 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 CGB7P0DN87 165 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 IGLC2P0DOY2 106 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 IGLC3P0DOY3 106 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 IGFBP2P18065 325 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 CRYBB3P26998 211 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 AMTP48728 403 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 PPOXP50336 477 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 KRTDAPP60985 99 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 SUMO1P63165 101 aaKnown RBP6.96□□□□□ -1.3
VPS50-208ENST00000458707 GUSBP1Q15486 140 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 TIGITQ495A1 244 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 SPATA45Q537H7 98 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 MBNL2Q5VZF2 373 aaKnown RBP6.96□□□□□ -1.3
VPS50-208ENST00000458707 OR4A47Q6IF82 309 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 RASL11AQ6T310 242 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 PET117Q6UWS5 81 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 C19orf35Q6ZS72 473 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 Q6ZT83 130 aa6.96□□□□□ -1.3
VPS50-208ENST00000458707 NIT1Q86X76 327 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms