RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 BOD1L1Q8NFC6 3051 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 IQCF6A8MYZ5 107 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 OR11H12B2RN74 326 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 IFNA10P01566 189 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 FABP6P51161 128 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 SMIM21Q3B7S5 101 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 OR11H1Q8NG94 326 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 OR11H2Q8NH07 326 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 GNG12Q9UBI6 72 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 TRBV24-1A0A075B6N3 115 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 LINC00473A8K010 186 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 ZNF883P0CG24 379 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 ACSF3Q4G176 576 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-207ENST00000458046 GMPPAQ96IJ6 420 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-207ENST00000458046 TMEM147Q9BVK8 224 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 PMS2P5A8MQ11 134 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 PHOX2AO14813 284 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 SPRY2O43597 315 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 P0C879 139 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 RPL23P62829 140 aaKnown RBP9.69□□□□□ -0.86
SYNE2-207ENST00000458046 CATR1Q13166 79 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 RPEL1Q2QD12 228 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 OR13A1Q8NGR1 328 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 OR4X1Q8NH49 305 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 PARLQ9H300 379 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 TIMM9Q9Y5J7 89 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 CTXND1A0A1B0GTU2 59 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 ENSAO43768 121 aaKnown RBP9.69□□□□□ -0.86
SYNE2-207ENST00000458046 KBTBD11O94819 623 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 IGHV3-13P01766 116 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 IGHV3-7P01780 117 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 KITLGP21583 273 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 COL10A1Q03692 680 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 EIF4EBP1Q13541 118 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-207ENST00000458046 TBR1Q16650 682 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 SLC35E4Q6ICL7 350 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 CYP2G1PQ6ZSU1 146 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 LINC00336Q6ZUF6 198 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 ZNF709Q8N972 641 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 HES4Q9HCC6 221 aa9.69□□□□□ -0.86
SYNE2-207ENST00000458046 CDX4O14627 284 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-207ENST00000458046 PFN1P07737 140 aaKnown RBP9.68□□□□□ -0.86
SYNE2-207ENST00000458046 EDDM3AQ14507 147 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 HES3Q5TGS1 186 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 ACP7Q6ZNF0 438 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 NPCDR1Q9BY65 106 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 SS18L2Q9UHA2 77 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 UFC1Q9Y3C8 167 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 LAMA5O15230 3695 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 ORM1P02763 201 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 COX5AP20674 150 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 ATP6V1FQ16864 119 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 TMEM200BQ69YZ2 307 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 OR2Z1Q8NG97 314 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 ACTR3CQ9C0K3 210 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-207ENST00000458046 FAM234AQ9H0X4 552 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 RETNQ9HD89 108 aa9.68□□□□□ -0.86
SYNE2-207ENST00000458046 AURKAIP1Q9NWT8 199 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-207ENST00000458046 DOPEY1Q5JWR5 2465 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 SMIM9A6NGZ8 99 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 H7BYZ3 331 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 VENTXO95231 258 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 CLDN14O95500 239 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 GALR1P47211 349 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 WDR82Q6UXN9 313 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 HIST1H2BLQ99880 126 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 QTRT1Q9BXR0 403 aaKnown RBP9.67□□□□□ -0.86
SYNE2-207ENST00000458046 ZDHHC11Q9H8X9 412 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 CRYAAP02489 173 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 HIST1H1BP16401 226 aaKnown RBP9.67□□□□□ -0.86
SYNE2-207ENST00000458046 OR5B12Q96R08 314 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 AGMATQ9BSE5 352 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 CXXC4Q9H2H0 198 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 PRO1933Q9H354 126 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 SAP30LQ9HAJ7 183 aa9.67□□□□□ -0.86
SYNE2-207ENST00000458046 PTPN13Q12923 2485 aa9.66□□□□□ -0.86
SYNE2-207ENST00000458046 FOXF2Q12947 444 aa9.66□□□□□ -0.86
SYNE2-207ENST00000458046 Q6ZT83 130 aa9.66□□□□□ -0.86
SYNE2-207ENST00000458046 VKORC1L1Q8N0U8 176 aa9.66□□□□□ -0.86
SYNE2-207ENST00000458046 TMEM178AQ8NBL3 297 aa9.66□□□□□ -0.86
SYNE2-207ENST00000458046 OR51G1Q8NGK1 321 aa9.66□□□□□ -0.86
SYNE2-207ENST00000458046 TRAV38-1A0A0B4J264 116 aa9.66□□□□□ -0.86
SYNE2-207ENST00000458046 TSTD3H0UI37 97 aa9.66□□□□□ -0.86
SYNE2-207ENST00000458046 TMEM250H0YL14 139 aa9.66□□□□□ -0.86
SYNE2-207ENST00000458046 GYPAP02724 150 aa9.66□□□□□ -0.86
SYNE2-207ENST00000458046 OR9G9P0C7N8 305 aa9.66□□□□□ -0.86
SYNE2-207ENST00000458046 NPPCP23582 126 aa9.66□□□□□ -0.86
SYNE2-207ENST00000458046 PRORYQ9H606 182 aa9.66□□□□□ -0.86
SYNE2-207ENST00000458046 PSMB11A5LHX3 300 aa9.65□□□□□ -0.86
SYNE2-207ENST00000458046 PPP5D1E7EU14 171 aa9.65□□□□□ -0.86
SYNE2-207ENST00000458046 H3BS24 57 aa9.65□□□□□ -0.86
SYNE2-207ENST00000458046 EDDM3BP56851 147 aa9.65□□□□□ -0.86
SYNE2-207ENST00000458046 LEMD1Q68G75 181 aa9.65□□□□□ -0.86
SYNE2-207ENST00000458046 ZNF66Q6ZN08 573 aa9.65□□□□□ -0.86
SYNE2-207ENST00000458046 CD177Q8N6Q3 437 aa9.65□□□□□ -0.86
SYNE2-207ENST00000458046 WDR31Q8NA23 367 aa9.65□□□□□ -0.86
SYNE2-207ENST00000458046 TMEM37Q8WXS4 190 aa9.65□□□□□ -0.86
SYNE2-207ENST00000458046 CIB3Q96Q77 187 aaPredicted RBP9.65□□□□□ -0.86
SYNE2-207ENST00000458046 C11orf94C9JXX5 98 aa9.65□□□□□ -0.87
SYNE2-207ENST00000458046 PROP1O75360 226 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms