RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 TIMM23BQ5SRD1 257 aa16.45■□□□□ 0.22
SNX27-204ENST00000458013 RIPPLY2Q5TAB7 128 aa16.44■□□□□ 0.22
SNX27-204ENST00000458013 NAA38Q9BRA0 125 aaKnown RBP16.44■□□□□ 0.22
SNX27-204ENST00000458013 PSMG3Q9BT73 122 aaPredicted RBP16.44■□□□□ 0.22
SNX27-204ENST00000458013 A0A1W2PR77 199 aa16.44■□□□□ 0.22
SNX27-204ENST00000458013 RPL23P62829 140 aaKnown RBP16.44■□□□□ 0.22
SNX27-204ENST00000458013 C5orf24Q7Z6I8 188 aa16.44■□□□□ 0.22
SNX27-204ENST00000458013 ZNF525Q8N782 197 aa16.44■□□□□ 0.22
SNX27-204ENST00000458013 OR9G9P0C7N8 305 aa16.44■□□□□ 0.22
SNX27-204ENST00000458013 PAX2Q02962 417 aa16.44■□□□□ 0.22
SNX27-204ENST00000458013 LRTM2Q8N967 370 aa16.44■□□□□ 0.22
SNX27-204ENST00000458013 LOXL4Q96JB6 756 aa16.44■□□□□ 0.22
SNX27-204ENST00000458013 RBBP6Q7Z6E9 1792 aaKnown RBP16.43■□□□□ 0.22
SNX27-204ENST00000458013 PINLYPA6NC86 204 aa16.43■□□□□ 0.22
SNX27-204ENST00000458013 H3BRM9 83 aa16.43■□□□□ 0.22
SNX27-204ENST00000458013 TM2D1Q9BX74 207 aa16.43■□□□□ 0.22
SNX27-204ENST00000458013 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.43■□□□□ 0.22
SNX27-204ENST00000458013 GDF15Q99988 308 aa16.43■□□□□ 0.22
SNX27-204ENST00000458013 MEGF9Q9H1U4 602 aa16.43■□□□□ 0.22
SNX27-204ENST00000458013 WFDC1Q9HC57 220 aa16.43■□□□□ 0.22
SNX27-204ENST00000458013 RNF222A6NCQ9 220 aa16.42■□□□□ 0.22
SNX27-204ENST00000458013 GLRXP35754 106 aa16.42■□□□□ 0.22
SNX27-204ENST00000458013 ZNF585BQ52M93 769 aa16.42■□□□□ 0.22
SNX27-204ENST00000458013 OR4X2Q8NGF9 303 aa16.42■□□□□ 0.22
SNX27-204ENST00000458013 IGKV2-40A0A087WW87 121 aaPredicted RBP16.42■□□□□ 0.22
SNX27-204ENST00000458013 IGKV2D-40P01614 121 aaPredicted RBP16.42■□□□□ 0.22
SNX27-204ENST00000458013 IGLV3-21P80748 117 aaPredicted RBP16.42■□□□□ 0.22
SNX27-204ENST00000458013 NIT1Q86X76 327 aa16.42■□□□□ 0.22
SNX27-204ENST00000458013 RBMY1BA6NDE4 496 aaKnown RBP16.42■□□□□ 0.22
SNX27-204ENST00000458013 RBMY1EA6NEQ0 496 aaKnown RBP16.42■□□□□ 0.22
SNX27-204ENST00000458013 RBMY1DP0C7P1 496 aaKnown RBP16.42■□□□□ 0.22
SNX27-204ENST00000458013 RBMY1A1P0DJD3 496 aaKnown RBP16.42■□□□□ 0.22
SNX27-204ENST00000458013 RBMY1CP0DJD4 496 aa16.42■□□□□ 0.22
SNX27-204ENST00000458013 TMEM219Q86XT9 240 aa16.42■□□□□ 0.22
SNX27-204ENST00000458013 COQ2Q96H96 371 aa16.42■□□□□ 0.22
SNX27-204ENST00000458013 TMEM250H0YL14 139 aa16.42■□□□□ 0.22
SNX27-204ENST00000458013 H7C1H1 209 aa16.42■□□□□ 0.22
SNX27-204ENST00000458013 KLRD1Q13241 179 aa16.42■□□□□ 0.22
SNX27-204ENST00000458013 RTN4RL2Q86UN3 420 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 FGFBP3Q8TAT2 258 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 GTF3AQ92664 365 aaKnown RBP16.41■□□□□ 0.22
SNX27-204ENST00000458013 ZNF257Q9Y2Q1 563 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 NRN1Q9NPD7 142 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 CLDN16Q9Y5I7 305 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 FAM181AQ8N9Y4 354 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 ZNF236Q9UL36 1845 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 FOXL1Q12952 345 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 ORMDL3Q8N138 153 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 CFHR5Q9BXR6 569 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 ST20Q9HBF5 79 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 RFNGQ9Y644 331 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 A0A0A6YYD4 124 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 LOC105371267A0A1B0GV96 52 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 HOXB1P14653 301 aaPredicted RBP16.41■□□□□ 0.22
SNX27-204ENST00000458013 C1QTNF5Q9BXJ0 243 aa16.41■□□□□ 0.22
SNX27-204ENST00000458013 RAB9AP51151 201 aa16.4■□□□□ 0.22
SNX27-204ENST00000458013 SLC25A28Q96A46 364 aa16.4■□□□□ 0.22
SNX27-204ENST00000458013 OSR1Q8TAX0 266 aaPredicted RBP16.4■□□□□ 0.22
SNX27-204ENST00000458013 CCL20P78556 96 aa16.4■□□□□ 0.22
SNX27-204ENST00000458013 NR2C2APQ86WQ0 139 aa16.4■□□□□ 0.22
SNX27-204ENST00000458013 FAM57AQ8TBR7 257 aa16.4■□□□□ 0.22
SNX27-204ENST00000458013 PQLC2LA1A4F0 135 aa16.4■□□□□ 0.22
SNX27-204ENST00000458013 STRCP1A6NGW2 1772 aa16.4■□□□□ 0.22
SNX27-204ENST00000458013 SPRR3Q9UBC9 169 aa16.4■□□□□ 0.22
SNX27-204ENST00000458013 VENTXO95231 258 aa16.39■□□□□ 0.21
SNX27-204ENST00000458013 RPL15P61313 204 aaKnown RBP16.39■□□□□ 0.21
SNX27-204ENST00000458013 ATP5LO75964 103 aa16.39■□□□□ 0.21
SNX27-204ENST00000458013 MLNRO43193 412 aa16.39■□□□□ 0.21
SNX27-204ENST00000458013 SPATA31B1PQ5VZV4 182 aa16.39■□□□□ 0.21
SNX27-204ENST00000458013 IGFL4Q6B9Z1 124 aa16.39■□□□□ 0.21
SNX27-204ENST00000458013 RNF126Q9BV68 326 aa16.39■□□□□ 0.21
SNX27-204ENST00000458013 LINC00587B1AMM8 73 aa16.39■□□□□ 0.21
SNX27-204ENST00000458013 IGHV3-53P01767 116 aa16.39■□□□□ 0.21
SNX27-204ENST00000458013 CD28P10747 220 aa16.39■□□□□ 0.21
SNX27-204ENST00000458013 TMEM167AQ8TBQ9 72 aa16.39■□□□□ 0.21
SNX27-204ENST00000458013 CHTOPQ9Y3Y2 248 aaKnown RBP16.39■□□□□ 0.21
SNX27-204ENST00000458013 NBR2O15453 112 aa16.38■□□□□ 0.21
SNX27-204ENST00000458013 NCR2O95944 276 aa16.38■□□□□ 0.21
SNX27-204ENST00000458013 C1orf122Q6ZSJ8 110 aa16.38■□□□□ 0.21
SNX27-204ENST00000458013 VCX2Q9H322 139 aa16.38■□□□□ 0.21
SNX27-204ENST00000458013 COL24A1Q17RW2 1714 aa16.38■□□□□ 0.21
SNX27-204ENST00000458013 PAPPA-AS1Q5QFB9 102 aa16.38■□□□□ 0.21
SNX27-204ENST00000458013 TM4SF5O14894 197 aa16.38■□□□□ 0.21
SNX27-204ENST00000458013 ARID1AO14497 2285 aa16.37■□□□□ 0.21
SNX27-204ENST00000458013 OTORQ9NRC9 128 aa16.37■□□□□ 0.21
SNX27-204ENST00000458013 CRIM1Q9NZV1 1036 aa16.37■□□□□ 0.21
SNX27-204ENST00000458013 MYOFQ9NZM1 2061 aa16.37■□□□□ 0.21
SNX27-204ENST00000458013 C17orf100A8MU93 164 aa16.37■□□□□ 0.21
SNX27-204ENST00000458013 RHOGP84095 191 aa16.37■□□□□ 0.21
SNX27-204ENST00000458013 TCRBV4S1A1TA0A5B7 111 aa16.37■□□□□ 0.21
SNX27-204ENST00000458013 TRGV4A0A0C4DH28 118 aa16.37■□□□□ 0.21
SNX27-204ENST00000458013 UPK2O00526 184 aa16.37■□□□□ 0.21
SNX27-204ENST00000458013 CA7P43166 264 aa16.37■□□□□ 0.21
SNX27-204ENST00000458013 MBD3L1Q8WWY6 194 aa16.37■□□□□ 0.21
SNX27-204ENST00000458013 IGKV1D-8A0A087WSZ0 117 aa16.37■□□□□ 0.21
SNX27-204ENST00000458013 IQCF6A8MYZ5 107 aa16.36■□□□□ 0.21
SNX27-204ENST00000458013 NDPQ00604 133 aa16.36■□□□□ 0.21
SNX27-204ENST00000458013 MORN2Q502X0 79 aa16.36■□□□□ 0.21
SNX27-204ENST00000458013 TRAV40A0A0B4J280 105 aa16.36■□□□□ 0.21
SNX27-204ENST00000458013 BTCP35070 178 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms