RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 A0A0B4J293 547 aa11.76□□□□□ -0.53
GPC1-206ENST00000455111 A0A1B0GU03 582 aa11.76□□□□□ -0.53
GPC1-206ENST00000455111 OR4C46A6NHA9 309 aa11.76□□□□□ -0.53
GPC1-206ENST00000455111 UBE2CO00762 179 aa11.76□□□□□ -0.53
GPC1-206ENST00000455111 NUPL2O15504 423 aaKnown RBP11.76□□□□□ -0.53
GPC1-206ENST00000455111 APOA1P02647 267 aa11.76□□□□□ -0.53
GPC1-206ENST00000455111 HSPE1P61604 102 aaKnown RBP11.76□□□□□ -0.53
GPC1-206ENST00000455111 RNASE12Q5GAN4 147 aaKnown RBP11.76□□□□□ -0.53
GPC1-206ENST00000455111 TOMM20LQ6UXN7 152 aa11.76□□□□□ -0.53
GPC1-206ENST00000455111 GBGT1Q8N5D6 347 aa11.76□□□□□ -0.53
GPC1-206ENST00000455111 ST8SIA2Q92186 375 aa11.76□□□□□ -0.53
GPC1-206ENST00000455111 A0A087WXM4 84 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 NUPR2A6NF83 97 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 CYB5BO43169 146 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 ATF4P18848 351 aaPredicted RBP11.75□□□□□ -0.53
GPC1-206ENST00000455111 MFAP4P55083 255 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 TSPAN5P62079 268 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 MLANAQ16655 118 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 STPG3Q8N7X2 389 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 OR4D10Q8NGI6 311 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 CMTM3Q96MX0 182 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 TSC22D3Q99576 134 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 VSIRQ9H7M9 311 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 SCPEP1Q9HB40 452 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 FKBP11Q9NYL4 201 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 KLK11Q9UBX7 282 aa11.75□□□□□ -0.53
GPC1-206ENST00000455111 AGRNO00468 2067 aa11.74□□□□□ -0.53
GPC1-206ENST00000455111 IGHV3-66A0A0C4DH42 116 aa11.74□□□□□ -0.53
GPC1-206ENST00000455111 RCVRNP35243 200 aa11.74□□□□□ -0.53
GPC1-206ENST00000455111 RND3P61587 244 aa11.74□□□□□ -0.53
GPC1-206ENST00000455111 Q6ZRM9 215 aa11.74□□□□□ -0.53
GPC1-206ENST00000455111 H2BFWTQ7Z2G1 175 aa11.74□□□□□ -0.53
GPC1-206ENST00000455111 PINX1Q96BK5 328 aaKnown RBP11.74□□□□□ -0.53
GPC1-206ENST00000455111 TXN2Q99757 166 aa11.74□□□□□ -0.53
GPC1-206ENST00000455111 FNDC4Q9H6D8 234 aaPredicted RBP11.74□□□□□ -0.53
GPC1-206ENST00000455111 TRAV14DV4A0A0A6YYC5 116 aa11.73□□□□□ -0.53
GPC1-206ENST00000455111 INS-IGF2F8WCM5 200 aa11.73□□□□□ -0.53
GPC1-206ENST00000455111 ST8SIA3O43173 380 aa11.73□□□□□ -0.53
GPC1-206ENST00000455111 DEDDO75618 318 aa11.73□□□□□ -0.53
GPC1-206ENST00000455111 YIF1AO95070 293 aa11.73□□□□□ -0.53
GPC1-206ENST00000455111 GIG44P09565 113 aaPredicted RBP11.73□□□□□ -0.53
GPC1-206ENST00000455111 RNASE2P10153 161 aaKnown RBP11.73□□□□□ -0.53
GPC1-206ENST00000455111 RELQ04864 619 aaPredicted RBP11.73□□□□□ -0.53
GPC1-206ENST00000455111 TCF24Q7RTU0 167 aa11.73□□□□□ -0.53
GPC1-206ENST00000455111 OR52I2Q8NH67 350 aa11.73□□□□□ -0.53
GPC1-206ENST00000455111 OR4A16Q8NH70 328 aa11.73□□□□□ -0.53
GPC1-206ENST00000455111 ABHD1Q96SE0 405 aa11.73□□□□□ -0.53
GPC1-206ENST00000455111 DNAH2Q9P225 4427 aa11.73□□□□□ -0.53
GPC1-206ENST00000455111 HECTD4Q9Y4D8 3996 aa11.72□□□□□ -0.53
GPC1-206ENST00000455111 DFFBO76075 338 aa11.72□□□□□ -0.53
GPC1-206ENST00000455111 TMEM50AO95807 157 aa11.72□□□□□ -0.53
GPC1-206ENST00000455111 CD3DP04234 171 aa11.72□□□□□ -0.53
GPC1-206ENST00000455111 SMIM18P0DKX4 95 aa11.72□□□□□ -0.53
GPC1-206ENST00000455111 NANOS2P60321 138 aaKnown RBP11.72□□□□□ -0.53
GPC1-206ENST00000455111 CTF1Q16619 201 aa11.72□□□□□ -0.53
GPC1-206ENST00000455111 SP6Q3SY56 376 aa11.72□□□□□ -0.53
GPC1-206ENST00000455111 LPCAT3Q6P1A2 487 aa11.72□□□□□ -0.53
GPC1-206ENST00000455111 PHLDA1Q8WV24 401 aaPredicted RBP11.72□□□□□ -0.53
GPC1-206ENST00000455111 KRTAP17-1Q9BYP8 105 aa11.72□□□□□ -0.53
GPC1-206ENST00000455111 CSTL1Q9H114 145 aa11.72□□□□□ -0.53
GPC1-206ENST00000455111 GNG7O60262 68 aa11.71□□□□□ -0.53
GPC1-206ENST00000455111 PIGPP57054 158 aa11.71□□□□□ -0.53
GPC1-206ENST00000455111 PRR20EP86478 221 aa11.71□□□□□ -0.53
GPC1-206ENST00000455111 PRR20CP86479 221 aa11.71□□□□□ -0.53
GPC1-206ENST00000455111 PRR20DP86480 221 aa11.71□□□□□ -0.53
GPC1-206ENST00000455111 PRR20BP86481 221 aa11.71□□□□□ -0.53
GPC1-206ENST00000455111 PRR20AP86496 221 aa11.71□□□□□ -0.53
GPC1-206ENST00000455111 BSXQ3C1V8 233 aa11.71□□□□□ -0.53
GPC1-206ENST00000455111 LEMD1Q68G75 181 aa11.71□□□□□ -0.53
GPC1-206ENST00000455111 LHFPL5Q8TAF8 219 aa11.71□□□□□ -0.53
GPC1-206ENST00000455111 MS4A6AQ9H2W1 248 aa11.71□□□□□ -0.53
GPC1-206ENST00000455111 MIXL1Q9H2W2 232 aa11.71□□□□□ -0.53
GPC1-206ENST00000455111 PUS1Q9Y606 427 aaKnown RBP eCLIP11.71□□□□□ -0.53
GPC1-206ENST00000455111 FAT2Q9NYQ8 4349 aa11.71□□□□□ -0.54
GPC1-206ENST00000455111 DEFB4AO15263 64 aa11.7□□□□□ -0.54
GPC1-206ENST00000455111 TNFAIP8O95379 198 aa11.7□□□□□ -0.54
GPC1-206ENST00000455111 ETV6P41212 452 aa11.7□□□□□ -0.54
GPC1-206ENST00000455111 PPP5CP53041 499 aa11.7□□□□□ -0.54
GPC1-206ENST00000455111 DNAH17Q9UFH2 4485 aa11.7□□□□□ -0.54
GPC1-206ENST00000455111 MPTX1A8MV57 137 aa11.69□□□□□ -0.54
GPC1-206ENST00000455111 CD74P04233 296 aa11.69□□□□□ -0.54
GPC1-206ENST00000455111 DEFB131AP59861 70 aa11.69□□□□□ -0.54
GPC1-206ENST00000455111 FAAP20Q6NZ36 180 aa11.69□□□□□ -0.54
GPC1-206ENST00000455111 ZNF600Q6ZNG1 722 aa11.69□□□□□ -0.54
GPC1-206ENST00000455111 TMEM170AQ8WVE7 144 aa11.69□□□□□ -0.54
GPC1-206ENST00000455111 RARRES2Q99969 163 aa11.69□□□□□ -0.54
GPC1-206ENST00000455111 MTFP1Q9UDX5 166 aa11.69□□□□□ -0.54
GPC1-206ENST00000455111 KIAA1109Q2LD37 5005 aa11.69□□□□□ -0.54
GPC1-206ENST00000455111 C3orf85A0A1B0GTC6 90 aa11.68□□□□□ -0.54
GPC1-206ENST00000455111 SMIM31A0A1B0GVY4 71 aa11.68□□□□□ -0.54
GPC1-206ENST00000455111 GABARAPO95166 117 aa11.68□□□□□ -0.54
GPC1-206ENST00000455111 IGKV1-17P01599 117 aa11.68□□□□□ -0.54
GPC1-206ENST00000455111 UCP1P25874 307 aa11.68□□□□□ -0.54
GPC1-206ENST00000455111 ERHP84090 104 aaKnown RBP11.68□□□□□ -0.54
GPC1-206ENST00000455111 AARDQ4LEZ3 155 aa11.68□□□□□ -0.54
GPC1-206ENST00000455111 OR13C8Q8NGS7 320 aa11.68□□□□□ -0.54
GPC1-206ENST00000455111 OR11H2Q8NH07 326 aa11.68□□□□□ -0.54
GPC1-206ENST00000455111 GATAD1Q8WUU5 269 aa11.68□□□□□ -0.54
GPC1-206ENST00000455111 ZNF486Q96H40 463 aaPredicted RBP11.68□□□□□ -0.54
GPC1-206ENST00000455111 C11orf68Q9H3H3 251 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms