RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 TMEM252Q8N6L7 170 aa8.62□□□□□ -1.03
SCN9A-205ENST00000454569 OR5T1Q8NG75 326 aa8.62□□□□□ -1.03
SCN9A-205ENST00000454569 ABHD5Q8WTS1 349 aa8.62□□□□□ -1.03
SCN9A-205ENST00000454569 P2RX4Q99571 388 aa8.62□□□□□ -1.03
SCN9A-205ENST00000454569 LYRM2Q9NU23 88 aaPredicted RBP8.62□□□□□ -1.03
SCN9A-205ENST00000454569 FAM229AH3BQW9 127 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 TAAR5O14804 337 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 CST7O76096 145 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 METTL15P1P0C7V9 234 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 EXOSC2Q13868 293 aaKnown RBP8.61□□□□□ -1.03
SCN9A-205ENST00000454569 ECSCRQ19T08 205 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 TMEM14EPQ6UXP3 125 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 ZNF680Q8NEM1 530 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 SGMS2Q8NHU3 365 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 SLC25A31Q9H0C2 315 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 WFDC1Q9HC57 220 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 UBQLN2Q9UHD9 624 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 PRSS46E5RG02 174 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 INS-IGF2F8WCM5 200 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 CFDP00746 253 aaPredicted RBP8.61□□□□□ -1.03
SCN9A-205ENST00000454569 IFNA10P01566 189 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 IGHV3-48P01763 117 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 CTRB1P17538 263 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 EWSR1Q01844 656 aaKnown RBP eCLIP8.61□□□□□ -1.03
SCN9A-205ENST00000454569 HIST2H2BDQ6DRA6 164 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 CTRB2Q6GPI1 263 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 UNQ5815/PRO19632Q6UWF5 114 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 Q6ZSV7 163 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 SLC35E3Q7Z769 313 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 ZNF418Q8TF45 676 aaPredicted RBP8.61□□□□□ -1.03
SCN9A-205ENST00000454569 ST8SIA2Q92186 375 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 MRPL18Q9H0U6 180 aaKnown RBP8.61□□□□□ -1.03
SCN9A-205ENST00000454569 HIPK2Q9H2X6 1198 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 FBXL17Q9UF56 701 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 CACFD1Q9UGQ2 172 aa8.61□□□□□ -1.03
SCN9A-205ENST00000454569 IGHV3-21A0A0B4J1V1 117 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 A0A1W2PN81 502 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 CLDN34H7C241 214 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 TRIM77I1YAP6 450 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 M0QZK8 103 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 CRYGCP07315 174 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 RNASE1P07998 156 aaKnown RBP8.6□□□□□ -1.03
SCN9A-205ENST00000454569 TPT1P13693 172 aaKnown RBP8.6□□□□□ -1.03
SCN9A-205ENST00000454569 CHRNA7P36544 502 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 TAS2R30P59541 319 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 LCNL1Q6ZST4 164 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 STX12Q86Y82 276 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 TTC9CQ8N5M4 171 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 TMEM217Q8N7C4 229 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 SLC24A4Q8NFF2 622 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 STOML3Q8TAV4 291 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 SMIM3Q9BZL3 60 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 ENY2Q9NPA8 101 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 SERTAD4Q9NUC0 356 aa8.6□□□□□ -1.03
SCN9A-205ENST00000454569 MRPL36Q9P0J6 103 aaKnown RBP8.6□□□□□ -1.03
SCN9A-205ENST00000454569 TRAV41A0A0B4J266 112 aa8.59□□□□□ -1.03
SCN9A-205ENST00000454569 IGF1P05019 195 aa8.59□□□□□ -1.03
SCN9A-205ENST00000454569 NPY1RP25929 384 aa8.59□□□□□ -1.03
SCN9A-205ENST00000454569 PPIFP30405 207 aaKnown RBP8.59□□□□□ -1.03
SCN9A-205ENST00000454569 CRIP2P52943 208 aaPredicted RBP8.59□□□□□ -1.03
SCN9A-205ENST00000454569 EIF5AP63241 154 aaKnown RBP8.59□□□□□ -1.03
SCN9A-205ENST00000454569 ERHP84090 104 aaKnown RBP8.59□□□□□ -1.03
SCN9A-205ENST00000454569 BAXQ07812 192 aa8.59□□□□□ -1.03
SCN9A-205ENST00000454569 C2orf83Q53S99 150 aa8.59□□□□□ -1.03
SCN9A-205ENST00000454569 PVRIGQ6DKI7 326 aa8.59□□□□□ -1.03
SCN9A-205ENST00000454569 OR8G2PQ6IF36 304 aa8.59□□□□□ -1.03
SCN9A-205ENST00000454569 ALKAL2Q6UX46 152 aa8.59□□□□□ -1.03
SCN9A-205ENST00000454569 ZNF329Q86UD4 541 aa8.59□□□□□ -1.03
SCN9A-205ENST00000454569 CIB3Q96Q77 187 aaPredicted RBP8.59□□□□□ -1.03
SCN9A-205ENST00000454569 PRSS22Q9GZN4 317 aa8.59□□□□□ -1.03
SCN9A-205ENST00000454569 FNDC4Q9H6D8 234 aaPredicted RBP8.59□□□□□ -1.03
SCN9A-205ENST00000454569 PFDN2Q9UHV9 154 aa8.59□□□□□ -1.03
SCN9A-205ENST00000454569 STRAPQ9Y3F4 350 aaKnown RBP8.59□□□□□ -1.03
SCN9A-205ENST00000454569 F11RQ9Y624 299 aaKnown RBP8.59□□□□□ -1.03
SCN9A-205ENST00000454569 S4R3C0 116 aa8.59□□□□□ -1.03
SCN9A-205ENST00000454569 BORCS7-ASMTA0A0B4J1R7 106 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 SNCAP37840 140 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 HTR2BP41595 481 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 CTAG1AP78358 180 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 CFHR3Q02985 330 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 AKIRIN2Q53H80 203 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 ETV3LQ6ZN32 361 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 Q8N2B8 174 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 STPG2Q8N412 459 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 SCARB1Q8WTV0 552 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 MS4A10Q96PG2 267 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 NPFFR1Q9GZQ6 430 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 CYTL1Q9NRR1 136 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 RFNGQ9Y644 331 aa8.58□□□□□ -1.04
SCN9A-205ENST00000454569 NPIPB5A8MRT5 1133 aa8.57□□□□□ -1.04
SCN9A-205ENST00000454569 F8W735 103 aaPredicted RBP8.57□□□□□ -1.04
SCN9A-205ENST00000454569 JTBO76095 146 aa8.57□□□□□ -1.04
SCN9A-205ENST00000454569 NDUFB8O95169 186 aa8.57□□□□□ -1.04
SCN9A-205ENST00000454569 LY86O95711 162 aa8.57□□□□□ -1.04
SCN9A-205ENST00000454569 SULT1A1P50225 295 aa8.57□□□□□ -1.04
SCN9A-205ENST00000454569 SCGB2A2Q13296 93 aa8.57□□□□□ -1.04
SCN9A-205ENST00000454569 RPL7L1Q6DKI1 246 aaKnown RBP8.57□□□□□ -1.04
SCN9A-205ENST00000454569 SLC25A24Q6NUK1 477 aa8.57□□□□□ -1.04
SCN9A-205ENST00000454569 BAP18Q8IXM2 172 aa8.57□□□□□ -1.04
SCN9A-205ENST00000454569 ZNF114Q8NC26 417 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms