RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 H0YIZ8 118 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 K7EIM0 57 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 K7EPK0 472 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 WRBO00258 174 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 SYNGR2O43760 224 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 TRBV12-3P01733 135 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 CDX1P47902 265 aaPredicted RBP12.08□□□□□ -0.48
VCX3B-204ENST00000453306 ERHP84090 104 aaKnown RBP12.08□□□□□ -0.48
VCX3B-204ENST00000453306 SLC25A24Q6NUK1 477 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 TMEM65Q6PI78 240 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 OR1P1Q8NH06 330 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 CHAC2Q8WUX2 184 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 DUX3Q96PT4 197 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 OR4C12Q96R67 309 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 HEYLQ9NQ87 328 aaPredicted RBP12.08□□□□□ -0.48
VCX3B-204ENST00000453306 ZFP57Q9NU63 452 aa12.08□□□□□ -0.48
VCX3B-204ENST00000453306 MRPL36Q9P0J6 103 aaKnown RBP12.08□□□□□ -0.48
VCX3B-204ENST00000453306 TSSC4Q9Y5U2 329 aaPredicted RBP12.08□□□□□ -0.48
VCX3B-204ENST00000453306 C15orf62A8K5M9 175 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 F8W735 103 aaPredicted RBP12.07□□□□□ -0.48
VCX3B-204ENST00000453306 I3L2K1 104 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 I3L521 148 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 SCGB1D2O95969 90 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 IGHV3-48P01763 117 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 IGHV3-23P01764 117 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 DEFA4P12838 97 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 IGLL1P15814 213 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 RAB32Q13637 225 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 ETV3LQ6ZN32 361 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 C8orf86Q6ZUL3 223 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 NECAP1Q8NC96 275 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 RCC1LQ96I51 464 aaKnown RBP12.07□□□□□ -0.48
VCX3B-204ENST00000453306 ZNF414Q96IQ9 312 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 UBE2E2Q96LR5 201 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 FNDC4Q9H6D8 234 aaPredicted RBP12.07□□□□□ -0.48
VCX3B-204ENST00000453306 SLA2Q9H6Q3 261 aa12.07□□□□□ -0.48
VCX3B-204ENST00000453306 A0A1B0GVG6 124 aa12.06□□□□□ -0.48
VCX3B-204ENST00000453306 RRAS2P62070 204 aaPredicted RBP12.06□□□□□ -0.48
VCX3B-204ENST00000453306 DEFB136Q30KP8 78 aa12.06□□□□□ -0.48
VCX3B-204ENST00000453306 C15orf32Q32M92 178 aa12.06□□□□□ -0.48
VCX3B-204ENST00000453306 C2orf83Q53S99 150 aa12.06□□□□□ -0.48
VCX3B-204ENST00000453306 Q5BKY6 102 aa12.06□□□□□ -0.48
VCX3B-204ENST00000453306 KHDC1LQ5JSQ8 128 aa12.06□□□□□ -0.48
VCX3B-204ENST00000453306 CCDC140Q96MF4 163 aa12.06□□□□□ -0.48
VCX3B-204ENST00000453306 RNF126Q9BV68 326 aa12.06□□□□□ -0.48
VCX3B-204ENST00000453306 GPR61Q9BZJ8 451 aa12.06□□□□□ -0.48
VCX3B-204ENST00000453306 MED28Q9H204 178 aa12.06□□□□□ -0.48
VCX3B-204ENST00000453306 H3BP45 60 aa12.05□□□□□ -0.48
VCX3B-204ENST00000453306 SSSCA1O60232 199 aa12.05□□□□□ -0.48
VCX3B-204ENST00000453306 CCNKO75909 580 aa12.05□□□□□ -0.48
VCX3B-204ENST00000453306 SNCAP37840 140 aa12.05□□□□□ -0.48
VCX3B-204ENST00000453306 HTR2BP41595 481 aa12.05□□□□□ -0.48
VCX3B-204ENST00000453306 ATP5G2Q06055 141 aa12.05□□□□□ -0.48
VCX3B-204ENST00000453306 ZNF343Q6P1L6 599 aa12.05□□□□□ -0.48
VCX3B-204ENST00000453306 KLHL30-AS1Q8NEE0 82 aa12.05□□□□□ -0.48
VCX3B-204ENST00000453306 SLC24A4Q8NFF2 622 aa12.05□□□□□ -0.48
VCX3B-204ENST00000453306 SCARB1Q8WTV0 552 aa12.05□□□□□ -0.48
VCX3B-204ENST00000453306 RAX2Q96IS3 184 aa12.05□□□□□ -0.48
VCX3B-204ENST00000453306 ENY2Q9NPA8 101 aa12.05□□□□□ -0.48
VCX3B-204ENST00000453306 LSM5Q9Y4Y9 91 aaKnown RBP12.05□□□□□ -0.48
VCX3B-204ENST00000453306 FAM223BA6NKX1 122 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 PMS2P5A8MQ11 134 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 MED6O75586 246 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 MT-CO2P00403 227 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 HIST1H1BP16401 226 aaKnown RBP12.04□□□□□ -0.48
VCX3B-204ENST00000453306 NPY1RP25929 384 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 RUNX1Q01196 453 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 HAPLN4Q86UW8 402 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 FAM223AQ8IWN6 122 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 ZNF502Q8TBZ5 544 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 C4orf3Q8WVX3 66 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 DPF1Q92782 380 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 MISP3Q96FF7 219 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 USMG5Q96IX5 58 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 SMIM8Q96KF7 97 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 NMES1Q9C002 83 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 HIPK2Q9H2X6 1198 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 OR5AC2Q9NZP5 309 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 CACFD1Q9UGQ2 172 aa12.04□□□□□ -0.48
VCX3B-204ENST00000453306 TRAV14DV4A0A0A6YYC5 116 aa12.03□□□□□ -0.48
VCX3B-204ENST00000453306 ANKRD34BA5PLL1 514 aa12.03□□□□□ -0.48
VCX3B-204ENST00000453306 PRSS46E5RG02 174 aa12.03□□□□□ -0.48
VCX3B-204ENST00000453306 IFNA10P01566 189 aa12.03□□□□□ -0.48
VCX3B-204ENST00000453306 LGALS1P09382 135 aaKnown RBP12.03□□□□□ -0.48
VCX3B-204ENST00000453306 ARL16Q0P5N6 197 aa12.03□□□□□ -0.48
VCX3B-204ENST00000453306 EXOSC2Q13868 293 aaKnown RBP12.03□□□□□ -0.48
VCX3B-204ENST00000453306 DEFB121Q5J5C9 76 aa12.03□□□□□ -0.48
VCX3B-204ENST00000453306 U3KQ87 197 aa12.03□□□□□ -0.48
VCX3B-204ENST00000453306 IGHV4OR15-8A0A075B7B6 117 aa12.02□□□□□ -0.49
VCX3B-204ENST00000453306 A0A087WW49 117 aa12.02□□□□□ -0.49
VCX3B-204ENST00000453306 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.02□□□□□ -0.49
VCX3B-204ENST00000453306 G3V3Q6 166 aa12.02□□□□□ -0.49
VCX3B-204ENST00000453306 LRRC37A5PQ49AS3 106 aa12.02□□□□□ -0.49
VCX3B-204ENST00000453306 SPANXN5Q5MJ07 72 aa12.02□□□□□ -0.49
VCX3B-204ENST00000453306 MRPL41Q8IXM3 137 aaKnown RBP12.02□□□□□ -0.49
VCX3B-204ENST00000453306 VN1R17PQ8TDU5 208 aa12.02□□□□□ -0.49
VCX3B-204ENST00000453306 PPP1R1CQ8WVI7 109 aa12.02□□□□□ -0.49
VCX3B-204ENST00000453306 PINX1Q96BK5 328 aaKnown RBP12.02□□□□□ -0.49
VCX3B-204ENST00000453306 ZNF436Q9C0F3 470 aaPredicted RBP12.02□□□□□ -0.49
VCX3B-204ENST00000453306 PSENENQ9NZ42 101 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms