RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SPAG8Q99932 426 aaPredicted RBP9.64□□□□□ -0.87
CHD3-206ENST00000452447 GGTLC1Q9BX51 225 aa9.64□□□□□ -0.87
CHD3-206ENST00000452447 COPZ2Q9P299 210 aa9.64□□□□□ -0.87
CHD3-206ENST00000452447 DNAH1Q9P2D7 4330 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 IGHV3OR16-8A0A075B7F1 116 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 LOC102724200A0A096LPH7 203 aaPredicted RBP9.63□□□□□ -0.87
CHD3-206ENST00000452447 F8W735 103 aaPredicted RBP9.63□□□□□ -0.87
CHD3-206ENST00000452447 K7EMT4 169 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 TSPAN4O14817 238 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 CTSGP08311 255 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 ADMP35318 185 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 PPP5CP53041 499 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 MRPS10P82664 201 aaKnown RBP9.63□□□□□ -0.87
CHD3-206ENST00000452447 TRIM16LQ309B1 348 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 CCDC71LQ8N9Z2 235 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 ZNF114Q8NC26 417 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 TERB2Q8NHR7 220 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 ZFAND1Q8TCF1 268 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 PINX1Q96BK5 328 aaKnown RBP9.63□□□□□ -0.87
CHD3-206ENST00000452447 C3orf85A0A1B0GTC6 90 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 FABP12A6NFH5 140 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 C15orf62A8K5M9 175 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 GABARAPH6UMI1 98 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 ZNF207O43670 478 aaKnown RBP9.63□□□□□ -0.87
CHD3-206ENST00000452447 YIF1AO95070 293 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 RAB3DO95716 219 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 MT-CO2P00403 227 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 SNCAP37840 140 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 IL18Q14116 193 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 IZUMO4Q1ZYL8 232 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 ZBTB8BQ8NAP8 495 aaPredicted RBP9.63□□□□□ -0.87
CHD3-206ENST00000452447 TMEM229BQ8NBD8 167 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 TP53RKQ96S44 253 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 TXN2Q99757 166 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 PDCD10Q9BUL8 212 aa9.63□□□□□ -0.87
CHD3-206ENST00000452447 PAIP2BQ9ULR5 123 aaKnown RBP9.63□□□□□ -0.87
CHD3-206ENST00000452447 I3L2K1 104 aa9.62□□□□□ -0.87
CHD3-206ENST00000452447 CTDSP2O14595 271 aa9.62□□□□□ -0.87
CHD3-206ENST00000452447 GNG7O60262 68 aa9.62□□□□□ -0.87
CHD3-206ENST00000452447 ATP6V1G1O75348 118 aa9.62□□□□□ -0.87
CHD3-206ENST00000452447 IFNA17P01571 189 aa9.62□□□□□ -0.87
CHD3-206ENST00000452447 CD74P04233 296 aa9.62□□□□□ -0.87
CHD3-206ENST00000452447 FCGR2BP31994 310 aaPredicted RBP9.62□□□□□ -0.87
CHD3-206ENST00000452447 ETV6P41212 452 aa9.62□□□□□ -0.87
CHD3-206ENST00000452447 SSBP1Q04837 148 aaKnown RBP9.62□□□□□ -0.87
CHD3-206ENST00000452447 ZNF846Q147U1 533 aa9.62□□□□□ -0.87
CHD3-206ENST00000452447 SPINK9Q5DT21 86 aa9.62□□□□□ -0.87
CHD3-206ENST00000452447 STEAP1BQ6NZ63 245 aa9.62□□□□□ -0.87
CHD3-206ENST00000452447 SLC35G3Q8N808 338 aa9.62□□□□□ -0.87
CHD3-206ENST00000452447 OR4D10Q8NGI6 311 aa9.62□□□□□ -0.87
CHD3-206ENST00000452447 RNASE11Q8TAA1 199 aaKnown RBP9.62□□□□□ -0.87
CHD3-206ENST00000452447 RRNAD1Q96FB5 475 aaKnown RBP9.62□□□□□ -0.87
CHD3-206ENST00000452447 UBQLN2Q9UHD9 624 aa9.62□□□□□ -0.87
CHD3-206ENST00000452447 LCE6AA0A183 80 aa9.61□□□□□ -0.87
CHD3-206ENST00000452447 OR4C46A6NHA9 309 aa9.61□□□□□ -0.87
CHD3-206ENST00000452447 IGKV1-5P01602 117 aa9.61□□□□□ -0.87
CHD3-206ENST00000452447 IGHV3-48P01763 117 aa9.61□□□□□ -0.87
CHD3-206ENST00000452447 TNFSF8P32971 234 aa9.61□□□□□ -0.87
CHD3-206ENST00000452447 SP6Q3SY56 376 aa9.61□□□□□ -0.87
CHD3-206ENST00000452447 OR13C8Q8NGS7 320 aa9.61□□□□□ -0.87
CHD3-206ENST00000452447 MIXL1Q9H2W2 232 aa9.61□□□□□ -0.87
CHD3-206ENST00000452447 A0A0B4J293 547 aa9.6□□□□□ -0.87
CHD3-206ENST00000452447 IGHV7-4-1A0A0J9YVY3 117 aa9.6□□□□□ -0.87
CHD3-206ENST00000452447 ST8SIA3O43173 380 aa9.6□□□□□ -0.87
CHD3-206ENST00000452447 B3GALNT1O75752 331 aa9.6□□□□□ -0.87
CHD3-206ENST00000452447 NPBWR1P48145 328 aa9.6□□□□□ -0.87
CHD3-206ENST00000452447 APOC4P55056 127 aa9.6□□□□□ -0.87
CHD3-206ENST00000452447 MEF2DQ14814 521 aa9.6□□□□□ -0.87
CHD3-206ENST00000452447 TMEM116Q8NCL8 245 aa9.6□□□□□ -0.87
CHD3-206ENST00000452447 DUSP18Q8NEJ0 188 aa9.6□□□□□ -0.87
CHD3-206ENST00000452447 MARCH1Q8TCQ1 289 aa9.6□□□□□ -0.87
CHD3-206ENST00000452447 RHPN1-AS1Q9BWJ2 59 aa9.6□□□□□ -0.87
CHD3-206ENST00000452447 ENY2Q9NPA8 101 aa9.6□□□□□ -0.87
CHD3-206ENST00000452447 SMPXQ9UHP9 88 aa9.6□□□□□ -0.87
CHD3-206ENST00000452447 C14orf166Q9Y224 244 aaKnown RBP9.6□□□□□ -0.87
CHD3-206ENST00000452447 TRAV14DV4A0A0A6YYC5 116 aa9.59□□□□□ -0.87
CHD3-206ENST00000452447 A0A1B0GVG6 124 aa9.59□□□□□ -0.87
CHD3-206ENST00000452447 CTSDP07339 412 aaPredicted RBP9.59□□□□□ -0.87
CHD3-206ENST00000452447 UCP1P25874 307 aa9.59□□□□□ -0.87
CHD3-206ENST00000452447 INPP1P49441 399 aa9.59□□□□□ -0.87
CHD3-206ENST00000452447 HOXA1P49639 335 aaPredicted RBP9.59□□□□□ -0.87
CHD3-206ENST00000452447 SUB1P53999 127 aaKnown RBP eCLIP9.59□□□□□ -0.87
CHD3-206ENST00000452447 CCDC190Q86UF4 302 aa9.59□□□□□ -0.87
CHD3-206ENST00000452447 OR10C1Q96KK4 312 aa9.59□□□□□ -0.87
CHD3-206ENST00000452447 RNF2Q99496 336 aa9.59□□□□□ -0.87
CHD3-206ENST00000452447 OVOL2Q9BRP0 275 aa9.59□□□□□ -0.87
CHD3-206ENST00000452447 GINS3Q9BRX5 216 aa9.59□□□□□ -0.87
CHD3-206ENST00000452447 HYDINQ4G0P3 5121 aa9.59□□□□□ -0.87
CHD3-206ENST00000452447 PLECQ15149 4684 aaKnown RBP9.59□□□□□ -0.87
CHD3-206ENST00000452447 IGHV3-49A0A0A0MS15 119 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 TEX13DA0A0J9YY54 714 aaPredicted RBP9.58□□□□□ -0.88
CHD3-206ENST00000452447 DISC1C4P0D8 188 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 INS-IGF2F8WCM5 200 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 CORTO00230 105 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 CHEK1O14757 476 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 PFDN1O60925 122 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 P0C879 139 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 BMI1P35226 326 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 FAAP20Q6NZ36 180 aa9.58□□□□□ -0.88
CHD3-206ENST00000452447 SMIM4Q8WVI0 70 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms