RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 Q56UQ5 140 aa14.5□□□□□ -0.09
USP40-207ENST00000450940 PVRIGQ6DKI7 326 aa14.5□□□□□ -0.09
USP40-207ENST00000450940 RBPMS2Q6ZRY4 209 aaKnown RBP14.5□□□□□ -0.09
USP40-207ENST00000450940 ISOC1Q96CN7 298 aa14.5□□□□□ -0.09
USP40-207ENST00000450940 DIRAS2Q96HU8 199 aa14.5□□□□□ -0.09
USP40-207ENST00000450940 RTBDNQ9BSG5 229 aaPredicted RBP14.5□□□□□ -0.09
USP40-207ENST00000450940 CSMD3Q7Z407 3707 aa14.5□□□□□ -0.09
USP40-207ENST00000450940 TSPAN4O14817 238 aa14.49□□□□□ -0.09
USP40-207ENST00000450940 MT-CO2P00403 227 aa14.49□□□□□ -0.09
USP40-207ENST00000450940 UBAC2Q8NBM4 344 aa14.49□□□□□ -0.09
USP40-207ENST00000450940 MISP3Q96FF7 219 aa14.49□□□□□ -0.09
USP40-207ENST00000450940 SPAG8Q99932 426 aaPredicted RBP14.49□□□□□ -0.09
USP40-207ENST00000450940 SLIRPQ9GZT3 109 aaKnown RBP14.49□□□□□ -0.09
USP40-207ENST00000450940 ST8SIA3O43173 380 aa14.48□□□□□ -0.09
USP40-207ENST00000450940 GSTZ1O43708 216 aaPredicted RBP14.48□□□□□ -0.09
USP40-207ENST00000450940 CDS2O95674 445 aa14.48□□□□□ -0.09
USP40-207ENST00000450940 AKR1C2P52895 323 aa14.48□□□□□ -0.09
USP40-207ENST00000450940 RELQ04864 619 aaPredicted RBP14.48□□□□□ -0.09
USP40-207ENST00000450940 AARDQ4LEZ3 155 aa14.48□□□□□ -0.09
USP40-207ENST00000450940 FAAP20Q6NZ36 180 aa14.48□□□□□ -0.09
USP40-207ENST00000450940 OR10C1Q96KK4 312 aa14.48□□□□□ -0.09
USP40-207ENST00000450940 SOSTQ9BQB4 213 aa14.48□□□□□ -0.09
USP40-207ENST00000450940 NXF2Q9GZY0 626 aaKnown RBP14.48□□□□□ -0.09
USP40-207ENST00000450940 TMEM222Q9H0R3 208 aa14.48□□□□□ -0.09
USP40-207ENST00000450940 DISC1C4P0D8 188 aa14.47□□□□□ -0.09
USP40-207ENST00000450940 NUPL2O15504 423 aaKnown RBP14.47□□□□□ -0.09
USP40-207ENST00000450940 AKAIN1P0CW23 69 aa14.47□□□□□ -0.09
USP40-207ENST00000450940 IL18Q14116 193 aa14.47□□□□□ -0.09
USP40-207ENST00000450940 TRIM16LQ309B1 348 aa14.47□□□□□ -0.09
USP40-207ENST00000450940 OR4C16Q8NGL9 310 aa14.47□□□□□ -0.09
USP40-207ENST00000450940 GLYATL2Q8WU03 294 aa14.47□□□□□ -0.09
USP40-207ENST00000450940 C20orf24Q9BUV8 137 aa14.47□□□□□ -0.09
USP40-207ENST00000450940 RETNQ9HD89 108 aa14.47□□□□□ -0.09
USP40-207ENST00000450940 SMPXQ9UHP9 88 aa14.47□□□□□ -0.09
USP40-207ENST00000450940 GPR132Q9UNW8 380 aa14.47□□□□□ -0.09
USP40-207ENST00000450940 TENM2Q9NT68 2774 aa14.47□□□□□ -0.09
USP40-207ENST00000450940 A0A0G2JRQ6 117 aa14.46□□□□□ -0.09
USP40-207ENST00000450940 H3BMQ9 156 aa14.46□□□□□ -0.09
USP40-207ENST00000450940 SNCAP37840 140 aa14.46□□□□□ -0.09
USP40-207ENST00000450940 SPINK9Q5DT21 86 aa14.46□□□□□ -0.09
USP40-207ENST00000450940 LAMTOR1Q6IAA8 161 aa14.46□□□□□ -0.09
USP40-207ENST00000450940 Q6ZRM9 215 aa14.46□□□□□ -0.09
USP40-207ENST00000450940 FAM219AQ8IW50 185 aa14.46□□□□□ -0.09
USP40-207ENST00000450940 SLC35G3Q8N808 338 aa14.46□□□□□ -0.09
USP40-207ENST00000450940 RRNAD1Q96FB5 475 aaKnown RBP14.46□□□□□ -0.09
USP40-207ENST00000450940 RSL24D1Q9UHA3 163 aaKnown RBP14.46□□□□□ -0.09
USP40-207ENST00000450940 C14orf166Q9Y224 244 aaKnown RBP14.46□□□□□ -0.09
USP40-207ENST00000450940 STARD9Q9P2P6 4700 aa14.45□□□□□ -0.1
USP40-207ENST00000450940 IGHV3OR16-8A0A075B7F1 116 aa14.45□□□□□ -0.1
USP40-207ENST00000450940 TEX13DA0A0J9YY54 714 aaPredicted RBP14.45□□□□□ -0.1
USP40-207ENST00000450940 ANKRD20A5PA0PJZ0 165 aa14.45□□□□□ -0.1
USP40-207ENST00000450940 IFNA17P01571 189 aa14.45□□□□□ -0.1
USP40-207ENST00000450940 OR5AC1P0C628 307 aa14.45□□□□□ -0.1
USP40-207ENST00000450940 RNASE2P10153 161 aaKnown RBP14.45□□□□□ -0.1
USP40-207ENST00000450940 LHFPL5Q8TAF8 219 aa14.45□□□□□ -0.1
USP40-207ENST00000450940 PRRT1Q99946 306 aa14.45□□□□□ -0.1
USP40-207ENST00000450940 FAM110AQ9BQ89 295 aa14.45□□□□□ -0.1
USP40-207ENST00000450940 NAA60Q9H7X0 242 aa14.45□□□□□ -0.1
USP40-207ENST00000450940 IGHV7-4-1A0A0J9YVY3 117 aa14.44□□□□□ -0.1
USP40-207ENST00000450940 CRYM-AS1A6NIL9 109 aa14.44□□□□□ -0.1
USP40-207ENST00000450940 ZNF207O43670 478 aaKnown RBP14.44□□□□□ -0.1
USP40-207ENST00000450940 IGHV3-48P01763 117 aa14.44□□□□□ -0.1
USP40-207ENST00000450940 TNFSF8P32971 234 aa14.44□□□□□ -0.1
USP40-207ENST00000450940 ETV6P41212 452 aa14.44□□□□□ -0.1
USP40-207ENST00000450940 DHODHQ02127 395 aa14.44□□□□□ -0.1
USP40-207ENST00000450940 BSXQ3C1V8 233 aa14.44□□□□□ -0.1
USP40-207ENST00000450940 OR52E5Q8NH55 327 aa14.44□□□□□ -0.1
USP40-207ENST00000450940 RBPMSQ93062 196 aaKnown RBP14.44□□□□□ -0.1
USP40-207ENST00000450940 PINX1Q96BK5 328 aaKnown RBP14.44□□□□□ -0.1
USP40-207ENST00000450940 PDCD10Q9BUL8 212 aa14.44□□□□□ -0.1
USP40-207ENST00000450940 GGTLC1Q9BX51 225 aa14.44□□□□□ -0.1
USP40-207ENST00000450940 C6orf62Q9GZU0 229 aaPredicted RBP14.44□□□□□ -0.1
USP40-207ENST00000450940 RYR2Q92736 4967 aa14.44□□□□□ -0.1
USP40-207ENST00000450940 LOC102724200A0A096LPH7 203 aaPredicted RBP14.43□□□□□ -0.1
USP40-207ENST00000450940 CORTO00230 105 aa14.43□□□□□ -0.1
USP40-207ENST00000450940 CHEK1O14757 476 aa14.43□□□□□ -0.1
USP40-207ENST00000450940 GNG7O60262 68 aa14.43□□□□□ -0.1
USP40-207ENST00000450940 NPBWR1P48145 328 aa14.43□□□□□ -0.1
USP40-207ENST00000450940 SUB1P53999 127 aaKnown RBP eCLIP14.43□□□□□ -0.1
USP40-207ENST00000450940 SELENOHQ8IZQ5 122 aaKnown RBP14.43□□□□□ -0.1
USP40-207ENST00000450940 DUSP18Q8NEJ0 188 aa14.43□□□□□ -0.1
USP40-207ENST00000450940 OR51S1Q8NGJ8 323 aa14.43□□□□□ -0.1
USP40-207ENST00000450940 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.43□□□□□ -0.1
USP40-207ENST00000450940 NOL3O60936 208 aaKnown RBP14.42□□□□□ -0.1
USP40-207ENST00000450940 SPCS3P61009 180 aa14.42□□□□□ -0.1
USP40-207ENST00000450940 ODF3L2Q3SX64 289 aa14.42□□□□□ -0.1
USP40-207ENST00000450940 TMEM116Q8NCL8 245 aa14.42□□□□□ -0.1
USP40-207ENST00000450940 RHPN1-AS1Q9BWJ2 59 aa14.42□□□□□ -0.1
USP40-207ENST00000450940 TMEM56-RWDD3S4R434 201 aa14.42□□□□□ -0.1
USP40-207ENST00000450940 FABP12A6NFH5 140 aa14.41□□□□□ -0.1
USP40-207ENST00000450940 OR4C46A6NHA9 309 aa14.41□□□□□ -0.1
USP40-207ENST00000450940 TMEM50AO95807 157 aa14.41□□□□□ -0.1
USP40-207ENST00000450940 HOXA1P49639 335 aaPredicted RBP14.41□□□□□ -0.1
USP40-207ENST00000450940 FAM90A2PQ658T7 463 aa14.41□□□□□ -0.1
USP40-207ENST00000450940 ZFAND6Q6FIF0 208 aa14.41□□□□□ -0.1
USP40-207ENST00000450940 TOMM20LQ6UXN7 152 aa14.41□□□□□ -0.1
USP40-207ENST00000450940 MCFD2Q8NI22 146 aa14.41□□□□□ -0.1
USP40-207ENST00000450940 RNASE11Q8TAA1 199 aaKnown RBP14.41□□□□□ -0.1
USP40-207ENST00000450940 GALNT14Q96FL9 552 aa14.41□□□□□ -0.1
USP40-207ENST00000450940 RNF2Q99496 336 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms