RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 SIGLEC8Q9NYZ4 499 aa10.98□□□□□ -0.65
COL3A1-203ENST00000450867 ZMAT5Q9UDW3 170 aaKnown RBP10.98□□□□□ -0.65
COL3A1-203ENST00000450867 F8W735 103 aaPredicted RBP10.97□□□□□ -0.65
COL3A1-203ENST00000450867 ANXA7P20073 488 aaKnown RBP10.97□□□□□ -0.65
COL3A1-203ENST00000450867 ARL3P36405 182 aa10.97□□□□□ -0.65
COL3A1-203ENST00000450867 SNCAP37840 140 aa10.97□□□□□ -0.65
COL3A1-203ENST00000450867 HOXA1P49639 335 aaPredicted RBP10.97□□□□□ -0.65
COL3A1-203ENST00000450867 KRTAP10-11P60412 298 aa10.97□□□□□ -0.65
COL3A1-203ENST00000450867 TNFRSF9Q07011 255 aa10.97□□□□□ -0.65
COL3A1-203ENST00000450867 MZT2BQ6NZ67 158 aa10.97□□□□□ -0.65
COL3A1-203ENST00000450867 CLEC19AQ6UXS0 136 aa10.97□□□□□ -0.65
COL3A1-203ENST00000450867 IL34Q6ZMJ4 242 aa10.97□□□□□ -0.65
COL3A1-203ENST00000450867 GPHB5Q86YW7 130 aa10.97□□□□□ -0.65
COL3A1-203ENST00000450867 SCARB1Q8WTV0 552 aa10.97□□□□□ -0.65
COL3A1-203ENST00000450867 TGP01266 2768 aa10.97□□□□□ -0.65
COL3A1-203ENST00000450867 FAM90A26D6RGX4 464 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 PPP5D1E7EU14 171 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 LGALS9O00182 355 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 CORTO00230 105 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 CLEC3BP05452 202 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 HTR2BP41595 481 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 SUB1P53999 127 aaKnown RBP eCLIP10.96□□□□□ -0.65
COL3A1-203ENST00000450867 SYNJ2BPP57105 145 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 TATDN3Q17R31 274 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 SPSB3Q6PJ21 355 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 OR9G4Q8NGQ1 327 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 MITD1Q8WV92 249 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 BSCL2Q96G97 398 aaPredicted RBP10.96□□□□□ -0.65
COL3A1-203ENST00000450867 TXN2Q99757 166 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 ELOVL1Q9BW60 279 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 ENY2Q9NPA8 101 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 NUDT15Q9NV35 164 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 C21orf62Q9NYP8 219 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 S4R3C0 116 aa10.96□□□□□ -0.65
COL3A1-203ENST00000450867 FAM240BA0A1B0GVZ2 78 aa10.95□□□□□ -0.66
COL3A1-203ENST00000450867 A8MWP6 167 aa10.95□□□□□ -0.66
COL3A1-203ENST00000450867 TGOLN2O43493 480 aa10.95□□□□□ -0.66
COL3A1-203ENST00000450867 IGHV3-23P01764 117 aa10.95□□□□□ -0.66
COL3A1-203ENST00000450867 C4orf46Q504U0 113 aa10.95□□□□□ -0.66
COL3A1-203ENST00000450867 C2orf83Q53S99 150 aa10.95□□□□□ -0.66
COL3A1-203ENST00000450867 GGNBP1Q5YKI7 109 aa10.95□□□□□ -0.66
COL3A1-203ENST00000450867 COQ8AQ8NI60 647 aa10.95□□□□□ -0.66
COL3A1-203ENST00000450867 ZNF436Q9C0F3 470 aaPredicted RBP10.95□□□□□ -0.66
COL3A1-203ENST00000450867 AURKAIP1Q9NWT8 199 aaPredicted RBP10.95□□□□□ -0.66
COL3A1-203ENST00000450867 GAR1Q9NY12 217 aaKnown RBP10.95□□□□□ -0.66
COL3A1-203ENST00000450867 SAP30O75446 220 aa10.94□□□□□ -0.66
COL3A1-203ENST00000450867 OR2C1O95371 312 aa10.94□□□□□ -0.66
COL3A1-203ENST00000450867 MT-CO2P00403 227 aa10.94□□□□□ -0.66
COL3A1-203ENST00000450867 IGLV1-51P01701 117 aa10.94□□□□□ -0.66
COL3A1-203ENST00000450867 GPR183P32249 361 aa10.94□□□□□ -0.66
COL3A1-203ENST00000450867 ADMP35318 185 aa10.94□□□□□ -0.66
COL3A1-203ENST00000450867 ATP5IP56385 69 aaPredicted RBP10.94□□□□□ -0.66
COL3A1-203ENST00000450867 DUSP18Q8NEJ0 188 aa10.94□□□□□ -0.66
COL3A1-203ENST00000450867 OR1S1Q8NH92 325 aa10.94□□□□□ -0.66
COL3A1-203ENST00000450867 TMEM170AQ8WVE7 144 aa10.94□□□□□ -0.66
COL3A1-203ENST00000450867 MISP3Q96FF7 219 aa10.94□□□□□ -0.66
COL3A1-203ENST00000450867 HEYLQ9NQ87 328 aaPredicted RBP10.94□□□□□ -0.66
COL3A1-203ENST00000450867 PEMTQ9UBM1 199 aa10.94□□□□□ -0.66
COL3A1-203ENST00000450867 CEBPZOSA8MTT3 80 aa10.93□□□□□ -0.66
COL3A1-203ENST00000450867 CSN3P07498 182 aa10.93□□□□□ -0.66
COL3A1-203ENST00000450867 CTSGP08311 255 aa10.93□□□□□ -0.66
COL3A1-203ENST00000450867 HOXB5P09067 269 aa10.93□□□□□ -0.66
COL3A1-203ENST00000450867 H2AFB2P0C5Z0 115 aa10.93□□□□□ -0.66
COL3A1-203ENST00000450867 MFAP4P55083 255 aa10.93□□□□□ -0.66
COL3A1-203ENST00000450867 SLC24A4Q8NFF2 622 aa10.93□□□□□ -0.66
COL3A1-203ENST00000450867 DTD1Q8TEA8 209 aa10.93□□□□□ -0.66
COL3A1-203ENST00000450867 ZNF414Q96IQ9 312 aa10.93□□□□□ -0.66
COL3A1-203ENST00000450867 OR4C12Q96R67 309 aa10.93□□□□□ -0.66
COL3A1-203ENST00000450867 RBKSQ9H477 322 aa10.93□□□□□ -0.66
COL3A1-203ENST00000450867 TRAV6A0A075B6T7 132 aa10.92□□□□□ -0.66
COL3A1-203ENST00000450867 IGHV3-21A0A0B4J1V1 117 aa10.92□□□□□ -0.66
COL3A1-203ENST00000450867 OR2T8A6NH00 312 aa10.92□□□□□ -0.66
COL3A1-203ENST00000450867 ADAP1O75689 374 aa10.92□□□□□ -0.66
COL3A1-203ENST00000450867 ELLP55199 621 aaPredicted RBP10.92□□□□□ -0.66
COL3A1-203ENST00000450867 FAM106AQ4KMX7 169 aa10.92□□□□□ -0.66
COL3A1-203ENST00000450867 PLET1Q6UQ28 207 aa10.92□□□□□ -0.66
COL3A1-203ENST00000450867 ADAMTSL5Q6ZMM2 481 aa10.92□□□□□ -0.66
COL3A1-203ENST00000450867 NOXA1Q86UR1 476 aa10.92□□□□□ -0.66
COL3A1-203ENST00000450867 OR52B4Q8NGK2 314 aa10.92□□□□□ -0.66
COL3A1-203ENST00000450867 RNASEH2CQ8TDP1 164 aaKnown RBP10.92□□□□□ -0.66
COL3A1-203ENST00000450867 ZNF431Q8TF32 576 aaPredicted RBP10.92□□□□□ -0.66
COL3A1-203ENST00000450867 CHRDL1Q9BU40 450 aa10.92□□□□□ -0.66
COL3A1-203ENST00000450867 HIPK2Q9H2X6 1198 aa10.92□□□□□ -0.66
COL3A1-203ENST00000450867 FNDC4Q9H6D8 234 aaPredicted RBP10.92□□□□□ -0.66
COL3A1-203ENST00000450867 U3KQ87 197 aa10.92□□□□□ -0.66
COL3A1-203ENST00000450867 C2orf70A6NJV1 201 aa10.91□□□□□ -0.66
COL3A1-203ENST00000450867 NDUFA4O00483 81 aa10.91□□□□□ -0.66
COL3A1-203ENST00000450867 MED6O75586 246 aa10.91□□□□□ -0.66
COL3A1-203ENST00000450867 LY86O95711 162 aa10.91□□□□□ -0.66
COL3A1-203ENST00000450867 PRB2P02812 416 aaPredicted RBP10.91□□□□□ -0.66
COL3A1-203ENST00000450867 IL5P05113 134 aa10.91□□□□□ -0.66
COL3A1-203ENST00000450867 NPY1RP25929 384 aa10.91□□□□□ -0.66
COL3A1-203ENST00000450867 ID3Q02535 119 aa10.91□□□□□ -0.66
COL3A1-203ENST00000450867 OR4D5Q8NGN0 318 aa10.91□□□□□ -0.66
COL3A1-203ENST00000450867 TMEM190Q8WZ59 177 aa10.91□□□□□ -0.66
COL3A1-203ENST00000450867 WI2-2373I1.2A0A1W2PRP0 233 aa10.9□□□□□ -0.66
COL3A1-203ENST00000450867 TMEM213A2RRL7 107 aa10.9□□□□□ -0.66
COL3A1-203ENST00000450867 MPTX1A8MV57 137 aa10.9□□□□□ -0.66
COL3A1-203ENST00000450867 K7EIL1 84 aa10.9□□□□□ -0.66
COL3A1-203ENST00000450867 NXPH3O95157 252 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms