RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 SNCAP37840 140 aa11.44□□□□□ -0.58
CHD3-205ENST00000449744 TMBIM6P55061 237 aa11.44□□□□□ -0.58
CHD3-205ENST00000449744 SP6Q3SY56 376 aa11.44□□□□□ -0.58
CHD3-205ENST00000449744 SPINK9Q5DT21 86 aa11.44□□□□□ -0.58
CHD3-205ENST00000449744 RRNAD1Q96FB5 475 aaKnown RBP11.44□□□□□ -0.58
CHD3-205ENST00000449744 TXN2Q99757 166 aa11.44□□□□□ -0.58
CHD3-205ENST00000449744 SPAG8Q99932 426 aaPredicted RBP11.44□□□□□ -0.58
CHD3-205ENST00000449744 FAM110AQ9BQ89 295 aa11.44□□□□□ -0.58
CHD3-205ENST00000449744 BCL7BQ9BQE9 202 aa11.44□□□□□ -0.58
CHD3-205ENST00000449744 RABL2AQ9UBK7 228 aaPredicted RBP11.44□□□□□ -0.58
CHD3-205ENST00000449744 RABL2BQ9UNT1 228 aa11.44□□□□□ -0.58
CHD3-205ENST00000449744 IGHV3OR16-8A0A075B7F1 116 aa11.43□□□□□ -0.58
CHD3-205ENST00000449744 C15orf62A8K5M9 175 aa11.43□□□□□ -0.58
CHD3-205ENST00000449744 I3L2K1 104 aa11.43□□□□□ -0.58
CHD3-205ENST00000449744 ZNF207O43670 478 aaKnown RBP11.43□□□□□ -0.58
CHD3-205ENST00000449744 GNG7O60262 68 aa11.43□□□□□ -0.58
CHD3-205ENST00000449744 YIF1AO95070 293 aa11.43□□□□□ -0.58
CHD3-205ENST00000449744 CTSGP08311 255 aa11.43□□□□□ -0.58
CHD3-205ENST00000449744 SMIM4Q8WVI0 70 aa11.43□□□□□ -0.58
CHD3-205ENST00000449744 GGTLC1Q9BX51 225 aa11.43□□□□□ -0.58
CHD3-205ENST00000449744 C6orf62Q9GZU0 229 aaPredicted RBP11.43□□□□□ -0.58
CHD3-205ENST00000449744 ENY2Q9NPA8 101 aa11.43□□□□□ -0.58
CHD3-205ENST00000449744 CCDC59Q9P031 241 aaKnown RBP11.43□□□□□ -0.58
CHD3-205ENST00000449744 LOC102724200A0A096LPH7 203 aaPredicted RBP11.42□□□□□ -0.58
CHD3-205ENST00000449744 A0A0B4J293 547 aa11.42□□□□□ -0.58
CHD3-205ENST00000449744 TEX13DA0A0J9YY54 714 aaPredicted RBP11.42□□□□□ -0.58
CHD3-205ENST00000449744 TSPAN4O14817 238 aa11.42□□□□□ -0.58
CHD3-205ENST00000449744 CTDSPLO15194 276 aa11.42□□□□□ -0.58
CHD3-205ENST00000449744 ST8SIA3O43173 380 aa11.42□□□□□ -0.58
CHD3-205ENST00000449744 IGHV3-48P01763 117 aa11.42□□□□□ -0.58
CHD3-205ENST00000449744 AKAIN1P0CW23 69 aa11.42□□□□□ -0.58
CHD3-205ENST00000449744 UCP1P25874 307 aa11.42□□□□□ -0.58
CHD3-205ENST00000449744 FCGR2BP31994 310 aaPredicted RBP11.42□□□□□ -0.58
CHD3-205ENST00000449744 HOXA1P49639 335 aaPredicted RBP11.42□□□□□ -0.58
CHD3-205ENST00000449744 SUB1P53999 127 aaKnown RBP eCLIP11.42□□□□□ -0.58
CHD3-205ENST00000449744 FAAP20Q6NZ36 180 aa11.42□□□□□ -0.58
CHD3-205ENST00000449744 DUSP18Q8NEJ0 188 aa11.42□□□□□ -0.58
CHD3-205ENST00000449744 DYNC2LI1Q8TCX1 351 aa11.42□□□□□ -0.58
CHD3-205ENST00000449744 OR4C46A6NHA9 309 aa11.41□□□□□ -0.58
CHD3-205ENST00000449744 OR5AC1P0C628 307 aa11.41□□□□□ -0.58
CHD3-205ENST00000449744 P0C879 139 aa11.41□□□□□ -0.58
CHD3-205ENST00000449744 ETV6P41212 452 aa11.41□□□□□ -0.58
CHD3-205ENST00000449744 RPL5P46777 297 aaKnown RBP11.41□□□□□ -0.58
CHD3-205ENST00000449744 NPBWR1P48145 328 aa11.41□□□□□ -0.58
CHD3-205ENST00000449744 SURF2Q15527 256 aaPredicted RBP11.41□□□□□ -0.58
CHD3-205ENST00000449744 NXF2Q9GZY0 626 aaKnown RBP11.41□□□□□ -0.58
CHD3-205ENST00000449744 UBQLN2Q9UHD9 624 aa11.41□□□□□ -0.58
CHD3-205ENST00000449744 SMPXQ9UHP9 88 aa11.41□□□□□ -0.58
CHD3-205ENST00000449744 INS-IGF2F8WCM5 200 aa11.4□□□□□ -0.58
CHD3-205ENST00000449744 CORTO00230 105 aa11.4□□□□□ -0.58
CHD3-205ENST00000449744 FAM219AQ8IW50 185 aa11.4□□□□□ -0.58
CHD3-205ENST00000449744 TMEM116Q8NCL8 245 aa11.4□□□□□ -0.58
CHD3-205ENST00000449744 OR4C16Q8NGL9 310 aa11.4□□□□□ -0.58
CHD3-205ENST00000449744 IL17DQ8TAD2 202 aa11.4□□□□□ -0.58
CHD3-205ENST00000449744 PRRT1Q99946 306 aa11.4□□□□□ -0.58
CHD3-205ENST00000449744 NAA60Q9H7X0 242 aa11.4□□□□□ -0.58
CHD3-205ENST00000449744 RSL24D1Q9UHA3 163 aaKnown RBP11.4□□□□□ -0.58
CHD3-205ENST00000449744 TRAV14DV4A0A0A6YYC5 116 aa11.39□□□□□ -0.59
CHD3-205ENST00000449744 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
CHD3-205ENST00000449744 CDS2O95674 445 aa11.39□□□□□ -0.59
CHD3-205ENST00000449744 DHODHQ02127 395 aa11.39□□□□□ -0.59
CHD3-205ENST00000449744 GINS3Q9BRX5 216 aa11.39□□□□□ -0.59
CHD3-205ENST00000449744 RTBDNQ9BSG5 229 aaPredicted RBP11.39□□□□□ -0.59
CHD3-205ENST00000449744 RHPN1-AS1Q9BWJ2 59 aa11.39□□□□□ -0.59
CHD3-205ENST00000449744 TMEM222Q9H0R3 208 aa11.39□□□□□ -0.59
CHD3-205ENST00000449744 GPR132Q9UNW8 380 aa11.39□□□□□ -0.59
CHD3-205ENST00000449744 IGHV3-49A0A0A0MS15 119 aa11.38□□□□□ -0.59
CHD3-205ENST00000449744 A0A0G2JRQ6 117 aa11.38□□□□□ -0.59
CHD3-205ENST00000449744 RNASE2P10153 161 aaKnown RBP11.38□□□□□ -0.59
CHD3-205ENST00000449744 BMI1P35226 326 aa11.38□□□□□ -0.59
CHD3-205ENST00000449744 APOC4P55056 127 aa11.38□□□□□ -0.59
CHD3-205ENST00000449744 OR51S1Q8NGJ8 323 aa11.38□□□□□ -0.59
CHD3-205ENST00000449744 GLYATL2Q8WU03 294 aa11.38□□□□□ -0.59
CHD3-205ENST00000449744 RBPMSQ93062 196 aaKnown RBP11.38□□□□□ -0.59
CHD3-205ENST00000449744 OR10C1Q96KK4 312 aa11.38□□□□□ -0.59
CHD3-205ENST00000449744 RNF2Q99496 336 aa11.38□□□□□ -0.59
CHD3-205ENST00000449744 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.38□□□□□ -0.59
CHD3-205ENST00000449744 SCP2D1Q9UJQ7 156 aa11.38□□□□□ -0.59
CHD3-205ENST00000449744 FABP12A6NFH5 140 aa11.37□□□□□ -0.59
CHD3-205ENST00000449744 H3BMQ9 156 aa11.37□□□□□ -0.59
CHD3-205ENST00000449744 CHEK1O14757 476 aa11.37□□□□□ -0.59
CHD3-205ENST00000449744 GSTZ1O43708 216 aaPredicted RBP11.37□□□□□ -0.59
CHD3-205ENST00000449744 SCGB2A1O75556 95 aa11.37□□□□□ -0.59
CHD3-205ENST00000449744 OPRK1P41145 380 aa11.37□□□□□ -0.59
CHD3-205ENST00000449744 SPCS3P61009 180 aa11.37□□□□□ -0.59
CHD3-205ENST00000449744 TMEM268Q5VZI3 342 aa11.37□□□□□ -0.59
CHD3-205ENST00000449744 ZNF600Q6ZNG1 722 aa11.37□□□□□ -0.59
CHD3-205ENST00000449744 SELENOHQ8IZQ5 122 aaKnown RBP11.37□□□□□ -0.59
CHD3-205ENST00000449744 MCFD2Q8NI22 146 aa11.37□□□□□ -0.59
CHD3-205ENST00000449744 SCGB3A2Q96PL1 93 aa11.37□□□□□ -0.59
CHD3-205ENST00000449744 SLIRPQ9GZT3 109 aaKnown RBP11.37□□□□□ -0.59
CHD3-205ENST00000449744 MCUBQ9NWR8 336 aa11.37□□□□□ -0.59
CHD3-205ENST00000449744 KCNIP3Q9Y2W7 256 aa11.37□□□□□ -0.59
CHD3-205ENST00000449744 IGKV3-7A0A075B6H7 116 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 IGHV3OR16-13A0A075B7E8 117 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 IGHV3-74A0A0B4J1X5 117 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 ANKRD20A5PA0PJZ0 165 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 CRYM-AS1A6NIL9 109 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 TMEM50AO95807 157 aa11.36□□□□□ -0.59
CHD3-205ENST00000449744 TNFSF8P32971 234 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms