RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 CEPT1Q9Y6K0 416 aa11.69□□□□□ -0.54
LIMS1-210ENST00000449684 ST8SIA3O43173 380 aa11.68□□□□□ -0.54
LIMS1-210ENST00000449684 YIF1AO95070 293 aa11.68□□□□□ -0.54
LIMS1-210ENST00000449684 MT-CO2P00403 227 aa11.68□□□□□ -0.54
LIMS1-210ENST00000449684 UCP1P25874 307 aa11.68□□□□□ -0.54
LIMS1-210ENST00000449684 SUB1P53999 127 aaKnown RBP eCLIP11.68□□□□□ -0.54
LIMS1-210ENST00000449684 LAMTOR1Q6IAA8 161 aa11.68□□□□□ -0.54
LIMS1-210ENST00000449684 ZNF114Q8NC26 417 aa11.68□□□□□ -0.54
LIMS1-210ENST00000449684 SCGB3A2Q96PL1 93 aa11.68□□□□□ -0.54
LIMS1-210ENST00000449684 CHRDL1Q9BU40 450 aa11.68□□□□□ -0.54
LIMS1-210ENST00000449684 SLIRPQ9GZT3 109 aaKnown RBP11.68□□□□□ -0.54
LIMS1-210ENST00000449684 NAA60Q9H7X0 242 aa11.68□□□□□ -0.54
LIMS1-210ENST00000449684 SRD5A3Q9H8P0 318 aa11.68□□□□□ -0.54
LIMS1-210ENST00000449684 TRAV25A0A0B4J276 109 aa11.67□□□□□ -0.54
LIMS1-210ENST00000449684 A0A0B4J293 547 aa11.67□□□□□ -0.54
LIMS1-210ENST00000449684 GSTZ1O43708 216 aaPredicted RBP11.67□□□□□ -0.54
LIMS1-210ENST00000449684 GNG7O60262 68 aa11.67□□□□□ -0.54
LIMS1-210ENST00000449684 OR5AC1P0C628 307 aa11.67□□□□□ -0.54
LIMS1-210ENST00000449684 C8orf88P0DMB2 117 aa11.67□□□□□ -0.54
LIMS1-210ENST00000449684 TNFSF8P32971 234 aa11.67□□□□□ -0.54
LIMS1-210ENST00000449684 DHODHQ02127 395 aa11.67□□□□□ -0.54
LIMS1-210ENST00000449684 OR51S1Q8NGJ8 323 aa11.67□□□□□ -0.54
LIMS1-210ENST00000449684 MUC7Q8TAX7 377 aa11.67□□□□□ -0.54
LIMS1-210ENST00000449684 TXN2Q99757 166 aa11.67□□□□□ -0.54
LIMS1-210ENST00000449684 TMEM222Q9H0R3 208 aa11.67□□□□□ -0.54
LIMS1-210ENST00000449684 WFDC10AQ9H1F0 79 aa11.67□□□□□ -0.54
LIMS1-210ENST00000449684 KCNIP3Q9Y2W7 256 aa11.67□□□□□ -0.54
LIMS1-210ENST00000449684 HUWE1Q7Z6Z7 4374 aaKnown RBP11.66□□□□□ -0.54
LIMS1-210ENST00000449684 IGHV3OR16-8A0A075B7F1 116 aa11.66□□□□□ -0.54
LIMS1-210ENST00000449684 ANKRD20A5PA0PJZ0 165 aa11.66□□□□□ -0.54
LIMS1-210ENST00000449684 I3L2K1 104 aa11.66□□□□□ -0.54
LIMS1-210ENST00000449684 ZNF207O43670 478 aaKnown RBP11.66□□□□□ -0.54
LIMS1-210ENST00000449684 IGHV3-48P01763 117 aa11.66□□□□□ -0.54
LIMS1-210ENST00000449684 CTSGP08311 255 aa11.66□□□□□ -0.54
LIMS1-210ENST00000449684 S100A5P33763 92 aa11.66□□□□□ -0.54
LIMS1-210ENST00000449684 ETV6P41212 452 aa11.66□□□□□ -0.54
LIMS1-210ENST00000449684 NPBWR1P48145 328 aa11.66□□□□□ -0.54
LIMS1-210ENST00000449684 FAM219AQ8IW50 185 aa11.66□□□□□ -0.54
LIMS1-210ENST00000449684 DUSP18Q8NEJ0 188 aa11.66□□□□□ -0.54
LIMS1-210ENST00000449684 RBPMSQ93062 196 aaKnown RBP11.66□□□□□ -0.54
LIMS1-210ENST00000449684 RTBDNQ9BSG5 229 aaPredicted RBP11.66□□□□□ -0.54
LIMS1-210ENST00000449684 C5orf66Q9H5L9 145 aa11.66□□□□□ -0.54
LIMS1-210ENST00000449684 GPR132Q9UNW8 380 aa11.66□□□□□ -0.54
LIMS1-210ENST00000449684 K7EMT4 169 aa11.65□□□□□ -0.54
LIMS1-210ENST00000449684 CORTO00230 105 aa11.65□□□□□ -0.54
LIMS1-210ENST00000449684 CDS2O95674 445 aa11.65□□□□□ -0.54
LIMS1-210ENST00000449684 P0C879 139 aa11.65□□□□□ -0.54
LIMS1-210ENST00000449684 ADMP35318 185 aa11.65□□□□□ -0.54
LIMS1-210ENST00000449684 FAUP35544 74 aaKnown RBP11.65□□□□□ -0.54
LIMS1-210ENST00000449684 PYDC2Q56P42 97 aa11.65□□□□□ -0.54
LIMS1-210ENST00000449684 CITED4Q96RK1 184 aa11.65□□□□□ -0.54
LIMS1-210ENST00000449684 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.65□□□□□ -0.54
LIMS1-210ENST00000449684 CRYM-AS1A6NIL9 109 aa11.64□□□□□ -0.55
LIMS1-210ENST00000449684 C15orf62A8K5M9 175 aa11.64□□□□□ -0.55
LIMS1-210ENST00000449684 F8W735 103 aaPredicted RBP11.64□□□□□ -0.55
LIMS1-210ENST00000449684 SCGB2A1O75556 95 aa11.64□□□□□ -0.55
LIMS1-210ENST00000449684 LYL1P12980 280 aa11.64□□□□□ -0.55
LIMS1-210ENST00000449684 AP3S2P59780 193 aa11.64□□□□□ -0.55
LIMS1-210ENST00000449684 TMEM268Q5VZI3 342 aa11.64□□□□□ -0.55
LIMS1-210ENST00000449684 SELENOHQ8IZQ5 122 aaKnown RBP11.64□□□□□ -0.55
LIMS1-210ENST00000449684 GLYATL2Q8WU03 294 aa11.64□□□□□ -0.55
LIMS1-210ENST00000449684 SPAG8Q99932 426 aaPredicted RBP11.64□□□□□ -0.55
LIMS1-210ENST00000449684 A0A0G2JRQ6 117 aa11.63□□□□□ -0.55
LIMS1-210ENST00000449684 RBMY1BA6NDE4 496 aaKnown RBP11.63□□□□□ -0.55
LIMS1-210ENST00000449684 RBMY1EA6NEQ0 496 aaKnown RBP11.63□□□□□ -0.55
LIMS1-210ENST00000449684 INS-IGF2F8WCM5 200 aa11.63□□□□□ -0.55
LIMS1-210ENST00000449684 RBMY1DP0C7P1 496 aaKnown RBP11.63□□□□□ -0.55
LIMS1-210ENST00000449684 AKR1C4P17516 323 aa11.63□□□□□ -0.55
LIMS1-210ENST00000449684 FCGR2BP31994 310 aaPredicted RBP11.63□□□□□ -0.55
LIMS1-210ENST00000449684 SPCS3P61009 180 aa11.63□□□□□ -0.55
LIMS1-210ENST00000449684 GINS3Q9BRX5 216 aa11.63□□□□□ -0.55
LIMS1-210ENST00000449684 NXF2Q9GZY0 626 aaKnown RBP11.63□□□□□ -0.55
LIMS1-210ENST00000449684 HEYLQ9NQ87 328 aaPredicted RBP11.63□□□□□ -0.55
LIMS1-210ENST00000449684 TRAV14DV4A0A0A6YYC5 116 aa11.62□□□□□ -0.55
LIMS1-210ENST00000449684 OR4C46A6NHA9 309 aa11.62□□□□□ -0.55
LIMS1-210ENST00000449684 CEBPZOSA8MTT3 80 aa11.62□□□□□ -0.55
LIMS1-210ENST00000449684 TSPAN4O14817 238 aa11.62□□□□□ -0.55
LIMS1-210ENST00000449684 ANXA3P12429 323 aa11.62□□□□□ -0.55
LIMS1-210ENST00000449684 BMI1P35226 326 aa11.62□□□□□ -0.55
LIMS1-210ENST00000449684 OPRK1P41145 380 aa11.62□□□□□ -0.55
LIMS1-210ENST00000449684 LINC00322Q6ZN03 302 aaPredicted RBP11.62□□□□□ -0.55
LIMS1-210ENST00000449684 TOMM5Q8N4H5 51 aa11.62□□□□□ -0.55
LIMS1-210ENST00000449684 TMEM116Q8NCL8 245 aa11.62□□□□□ -0.55
LIMS1-210ENST00000449684 LHFPL5Q8TAF8 219 aa11.62□□□□□ -0.55
LIMS1-210ENST00000449684 CACNG5Q9UF02 275 aa11.62□□□□□ -0.55
LIMS1-210ENST00000449684 SMPXQ9UHP9 88 aa11.62□□□□□ -0.55
LIMS1-210ENST00000449684 NBEAL2Q6ZNJ1 2754 aa11.62□□□□□ -0.55
LIMS1-210ENST00000449684 LOC102724200A0A096LPH7 203 aaPredicted RBP11.61□□□□□ -0.55
LIMS1-210ENST00000449684 IGHV3-49A0A0A0MS15 119 aa11.61□□□□□ -0.55
LIMS1-210ENST00000449684 IGHV7-4-1A0A0J9YVY3 117 aa11.61□□□□□ -0.55
LIMS1-210ENST00000449684 RNASE2P10153 161 aaKnown RBP11.61□□□□□ -0.55
LIMS1-210ENST00000449684 HTR2BP41595 481 aa11.61□□□□□ -0.55
LIMS1-210ENST00000449684 Q6ZRM9 215 aa11.61□□□□□ -0.55
LIMS1-210ENST00000449684 OR52E5Q8NH55 327 aa11.61□□□□□ -0.55
LIMS1-210ENST00000449684 GPR146Q96CH1 333 aa11.61□□□□□ -0.55
LIMS1-210ENST00000449684 SOSTQ9BQB4 213 aa11.61□□□□□ -0.55
LIMS1-210ENST00000449684 RHPN1-AS1Q9BWJ2 59 aa11.61□□□□□ -0.55
LIMS1-210ENST00000449684 GGTLC1Q9BX51 225 aa11.61□□□□□ -0.55
LIMS1-210ENST00000449684 HIPK2Q9H2X6 1198 aa11.61□□□□□ -0.55
LIMS1-210ENST00000449684 RETNQ9HD89 108 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms