RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 DMRT1Q9Y5R6 373 aa11.43□□□□□ -0.58
SHANK2-210ENST00000449116 TRBV9A0A0B4J1U6 114 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 G3V3Q6 166 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 SMLR1H3BR10 107 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 CORTO00230 105 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 OR2J3O76001 311 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 OR8U8P0C7N1 319 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 SLC25A4P12235 298 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 RAB9AP51151 201 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 TMEM65Q6PI78 240 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 TMEM14EPQ6UXP3 125 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 RNF152Q8N8N0 203 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 OR4X2Q8NGF9 303 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 TMEM158Q8WZ71 300 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 DCUN1D4Q92564 292 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 MS4A10Q96PG2 267 aa11.42□□□□□ -0.58
SHANK2-210ENST00000449116 FAM24AA6NFZ4 105 aa11.41□□□□□ -0.58
SHANK2-210ENST00000449116 TRGV3P03979 118 aa11.41□□□□□ -0.58
SHANK2-210ENST00000449116 IFNA4P05014 189 aa11.41□□□□□ -0.58
SHANK2-210ENST00000449116 TPPP2P59282 170 aa11.41□□□□□ -0.58
SHANK2-210ENST00000449116 RHOGP84095 191 aa11.41□□□□□ -0.58
SHANK2-210ENST00000449116 ETV3LQ6ZN32 361 aa11.41□□□□□ -0.58
SHANK2-210ENST00000449116 NECAP1Q8NC96 275 aa11.41□□□□□ -0.58
SHANK2-210ENST00000449116 RNASEH2CQ8TDP1 164 aaKnown RBP11.41□□□□□ -0.58
SHANK2-210ENST00000449116 MISP3Q96FF7 219 aa11.41□□□□□ -0.58
SHANK2-210ENST00000449116 C19orf24Q9BVV8 132 aa11.41□□□□□ -0.58
SHANK2-210ENST00000449116 KLK15Q9H2R5 256 aa11.41□□□□□ -0.58
SHANK2-210ENST00000449116 FBXL7Q9UJT9 491 aa11.41□□□□□ -0.58
SHANK2-210ENST00000449116 FAM223BA6NKX1 122 aa11.4□□□□□ -0.58
SHANK2-210ENST00000449116 METTL15P1P0C7V9 234 aa11.4□□□□□ -0.58
SHANK2-210ENST00000449116 EXOSC2Q13868 293 aaKnown RBP11.4□□□□□ -0.58
SHANK2-210ENST00000449116 AWAT1Q58HT5 328 aa11.4□□□□□ -0.58
SHANK2-210ENST00000449116 LCNL1Q6ZST4 164 aa11.4□□□□□ -0.58
SHANK2-210ENST00000449116 FAM223AQ8IWN6 122 aa11.4□□□□□ -0.58
SHANK2-210ENST00000449116 TMEM252Q8N6L7 170 aa11.4□□□□□ -0.58
SHANK2-210ENST00000449116 PINX1Q96BK5 328 aaKnown RBP11.4□□□□□ -0.58
SHANK2-210ENST00000449116 NEURL2Q9BR09 285 aa11.4□□□□□ -0.58
SHANK2-210ENST00000449116 SLC25A31Q9H0C2 315 aa11.4□□□□□ -0.58
SHANK2-210ENST00000449116 FXYD6-FXYD2A0A087WZ82 144 aa11.39□□□□□ -0.59
SHANK2-210ENST00000449116 IGSF23A1L1A6 192 aa11.39□□□□□ -0.59
SHANK2-210ENST00000449116 PMS2P5A8MQ11 134 aa11.39□□□□□ -0.59
SHANK2-210ENST00000449116 SCAF4O95104 1147 aaKnown RBP11.39□□□□□ -0.59
SHANK2-210ENST00000449116 NDUFB8O95169 186 aa11.39□□□□□ -0.59
SHANK2-210ENST00000449116 MT-CO2P00403 227 aa11.39□□□□□ -0.59
SHANK2-210ENST00000449116 RPLP1P05386 114 aaKnown RBP11.39□□□□□ -0.59
SHANK2-210ENST00000449116 OPRK1P41145 380 aa11.39□□□□□ -0.59
SHANK2-210ENST00000449116 SULT1A1P50225 295 aa11.39□□□□□ -0.59
SHANK2-210ENST00000449116 DEFA5Q01523 94 aa11.39□□□□□ -0.59
SHANK2-210ENST00000449116 ATRQ13535 2644 aa11.39□□□□□ -0.59
SHANK2-210ENST00000449116 C15orf32Q32M92 178 aa11.39□□□□□ -0.59
SHANK2-210ENST00000449116 STX12Q86Y82 276 aa11.39□□□□□ -0.59
SHANK2-210ENST00000449116 MYOZ3Q8TDC0 251 aa11.39□□□□□ -0.59
SHANK2-210ENST00000449116 USMG5Q96IX5 58 aa11.39□□□□□ -0.59
SHANK2-210ENST00000449116 A0A0G2JLM5 398 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 RPS10-NUDT3A0A1W2PQS6 291 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 PRSS46E5RG02 174 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 I3L2K1 104 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 K7EIM0 57 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 PFDN1O60925 122 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 CD28P10747 220 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 RPL12P30050 165 aaKnown RBP11.38□□□□□ -0.59
SHANK2-210ENST00000449116 NUP62P37198 522 aaPredicted RBP11.38□□□□□ -0.59
SHANK2-210ENST00000449116 ATP5G2Q06055 141 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 BAXQ07812 192 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 CD300CQ08708 224 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 TCTEX1D4Q5JR98 221 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 OR8G2PQ6IF36 304 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 ETFRF1Q6IPR1 90 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 OR10P1Q8NGE3 313 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 VN1R17PQ8TDU5 208 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 WFDC12Q8WWY7 111 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 CXorf58Q96LI9 332 aa11.38□□□□□ -0.59
SHANK2-210ENST00000449116 FNDC4Q9H6D8 234 aaPredicted RBP11.38□□□□□ -0.59
SHANK2-210ENST00000449116 IGHV3-21A0A0B4J1V1 117 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 TCRBV4S1A1TA0A5B7 111 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 MFSD2BA6NFX1 497 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 CST7O76096 145 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 C1QBP02746 253 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 GPX4P36969 197 aaPredicted RBP11.37□□□□□ -0.59
SHANK2-210ENST00000449116 EWSR1Q01844 656 aaKnown RBP eCLIP11.37□□□□□ -0.59
SHANK2-210ENST00000449116 CD69Q07108 199 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 KIAA0141Q14154 515 aaPredicted RBP11.37□□□□□ -0.59
SHANK2-210ENST00000449116 SLC16A13Q7RTY0 426 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 ZNF546Q86UE3 836 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 HAPLN4Q86UW8 402 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 ZNF491Q8N8L2 437 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 C11orf44Q8N8P7 122 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 INO80EQ8NBZ0 244 aaPredicted RBP11.37□□□□□ -0.59
SHANK2-210ENST00000449116 OR11H4Q8NGC9 324 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 SCARB1Q8WTV0 552 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 EEF1AKMT3Q96AZ1 226 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 UBE2E2Q96LR5 201 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 ZC4H2Q9NQZ6 224 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 TNFSF18Q9UNG2 199 aa11.37□□□□□ -0.59
SHANK2-210ENST00000449116 HMSDA8MTL9 139 aa11.36□□□□□ -0.59
SHANK2-210ENST00000449116 ARPC5O15511 151 aa11.36□□□□□ -0.59
SHANK2-210ENST00000449116 KRTAP10-3P60369 221 aa11.36□□□□□ -0.59
SHANK2-210ENST00000449116 HBG1P69891 147 aa11.36□□□□□ -0.59
SHANK2-210ENST00000449116 HBG2P69892 147 aa11.36□□□□□ -0.59
SHANK2-210ENST00000449116 NHLH2Q02577 135 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms