RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 RIF1Q5UIP0 2472 aaKnown RBP10.56□□□□□ -0.72
SHC1-210ENST00000448116 TPPP2P59282 170 aa10.56□□□□□ -0.72
SHC1-210ENST00000448116 ST6GALNAC3Q8NDV1 305 aa10.56□□□□□ -0.72
SHC1-210ENST00000448116 ZCCHC14Q8WYQ9 949 aaKnown RBP10.56□□□□□ -0.72
SHC1-210ENST00000448116 NAT8BQ9UHF3 227 aa10.56□□□□□ -0.72
SHC1-210ENST00000448116 FOXA2Q9Y261 457 aaPredicted RBP10.56□□□□□ -0.72
SHC1-210ENST00000448116 SRRM4A7MD48 611 aaKnown RBP10.56□□□□□ -0.72
SHC1-210ENST00000448116 LINC00869P0C866 280 aa10.56□□□□□ -0.72
SHC1-210ENST00000448116 GLRXP35754 106 aa10.56□□□□□ -0.72
SHC1-210ENST00000448116 CCL8P80075 99 aa10.56□□□□□ -0.72
SHC1-210ENST00000448116 WFDC8Q8IUA0 241 aa10.56□□□□□ -0.72
SHC1-210ENST00000448116 ZCCHC24Q8N2G6 241 aaKnown RBP10.56□□□□□ -0.72
SHC1-210ENST00000448116 NHLRC2Q8NBF2 726 aa10.56□□□□□ -0.72
SHC1-210ENST00000448116 IL19Q9UHD0 177 aa10.56□□□□□ -0.72
SHC1-210ENST00000448116 PTPRBP23467 1997 aa10.56□□□□□ -0.72
SHC1-210ENST00000448116 TDRG1Q3Y452 100 aa10.56□□□□□ -0.72
SHC1-210ENST00000448116 SLC45A2Q9UMX9 530 aa10.56□□□□□ -0.72
SHC1-210ENST00000448116 CGB3P0DN86 165 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 CGB7P0DN87 165 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 PAX1P15863 534 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 YPEL3P61236 119 aaPredicted RBP10.55□□□□□ -0.72
SHC1-210ENST00000448116 CR1LQ2VPA4 569 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 TIGITQ495A1 244 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 MRPL54Q6P161 138 aaKnown RBP10.55□□□□□ -0.72
SHC1-210ENST00000448116 VN1R17PQ8TDU5 208 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 CORO2AQ92828 525 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 PRNDQ9UKY0 176 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 PAM16Q9Y3D7 125 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 TDGF1P3P51864 188 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 PRR20EP86478 221 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 PRR20CP86479 221 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 PRR20DP86480 221 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 PRR20BP86481 221 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 PRR20AP86496 221 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 NHLH1Q02575 133 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 FAM27E3Q08E93 113 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 RTL8BQ17RB0 113 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 BEND2Q8NDZ0 799 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 RAB9BQ9NP90 201 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 TMEM106BQ9NUM4 274 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 TECRQ9NZ01 308 aaKnown RBP10.55□□□□□ -0.72
SHC1-210ENST00000448116 TP53TG3Q9ULZ0 132 aa10.55□□□□□ -0.72
SHC1-210ENST00000448116 IGKV1OR2-108A0A075B7D4 117 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 FTH1P19P0C7X4 201 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 CFHR2P36980 270 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 Q6ZWC4 215 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 POLEQ07864 2286 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 TRAV5A0A0B4J249 113 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 CT45A6P0DMU7 189 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 CT45A5P0DMU8 189 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 CT45A7P0DMV0 189 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 IRF2P14316 349 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 LGALS4P56470 323 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 ZADH2Q8N4Q0 377 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 ADTRPQ96IZ2 230 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 TMEM167BQ9NRX6 74 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 TEX50A0A1B0GTY4 177 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 UPK2O00526 184 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 LHBP01229 141 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 KRTDAPP60985 99 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 TIMM23BQ5SRD1 257 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 C1orf194Q5T5A4 169 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 OR5AU1Q8NGC0 362 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 NEUROG1Q92886 237 aa10.54□□□□□ -0.72
SHC1-210ENST00000448116 CDKN1AP38936 164 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 C22orf34Q6ZV56 151 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 OR2T6Q8NHC8 308 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 COMMD5Q9GZQ3 224 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 M0R143 59 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 CA1P00915 261 aaPredicted RBP10.53□□□□□ -0.72
SHC1-210ENST00000448116 IGHV1-46P01743 117 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 CHRNB4P30926 498 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 C1orf174Q8IYL3 243 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 STXBP6Q8NFX7 210 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 GAFA1Q96PS6 74 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 V9GYV3 84 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 MGAQ8IWI9 3026 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 OTOGLQ3ZCN5 2332 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 SAA1P0DJI8 122 aaPredicted RBP10.53□□□□□ -0.72
SHC1-210ENST00000448116 PRCDQ00LT1 54 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 LINC00479Q96M42 142 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 HARBI1Q96MB7 349 aa10.53□□□□□ -0.72
SHC1-210ENST00000448116 PLXNB1O43157 2135 aa10.52□□□□□ -0.72
SHC1-210ENST00000448116 CCL3L1P16619 93 aa10.52□□□□□ -0.72
SHC1-210ENST00000448116 PMCHP20382 165 aa10.52□□□□□ -0.72
SHC1-210ENST00000448116 TNFSF4P23510 183 aa10.52□□□□□ -0.72
SHC1-210ENST00000448116 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.52□□□□□ -0.72
SHC1-210ENST00000448116 H1FXQ92522 213 aaKnown RBP10.52□□□□□ -0.72
SHC1-210ENST00000448116 C11orf52Q96A22 123 aa10.52□□□□□ -0.72
SHC1-210ENST00000448116 SSBP3Q9BWW4 388 aaPredicted RBP10.52□□□□□ -0.72
SHC1-210ENST00000448116 CSTL1Q9H114 145 aa10.52□□□□□ -0.72
SHC1-210ENST00000448116 GGTLC3B5MD39 225 aa10.52□□□□□ -0.73
SHC1-210ENST00000448116 C9JCJ5 164 aa10.52□□□□□ -0.73
SHC1-210ENST00000448116 AREGP15514 252 aa10.52□□□□□ -0.73
SHC1-210ENST00000448116 LINC00310P59036 64 aa10.52□□□□□ -0.73
SHC1-210ENST00000448116 TAS2R45P59539 299 aa10.52□□□□□ -0.73
SHC1-210ENST00000448116 LEMD1Q68G75 181 aa10.52□□□□□ -0.73
SHC1-210ENST00000448116 SIGLECL1Q8N7X8 197 aa10.52□□□□□ -0.73
SHC1-210ENST00000448116 ZNF503Q96F45 646 aa10.52□□□□□ -0.73
SHC1-210ENST00000448116 RPLP1P05386 114 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms