RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 CHTOPQ9Y3Y2 248 aaKnown RBP4.9□□□□□ -1.62
PROM1-201ENST00000447510 IGKV1-27A0A075B6S5 117 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 A0A1W2PPV4 95 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 GAGE12BA1L429 117 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 TMEM178BH3BS89 294 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 K7EP13 123 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 NAPSAO96009 420 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 DSCR9P59020 149 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 KRTAP10-9P60411 292 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 FGF12P61328 243 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 SRPXP78539 464 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 DEFB113Q30KQ7 82 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 ZNF841Q6ZN19 808 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 ACP7Q6ZNF0 438 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 OR10G8Q8NGN5 311 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 SLC25A10Q9UBX3 287 aaPredicted RBP4.9□□□□□ -1.62
PROM1-201ENST00000447510 RNF114Q9Y508 228 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 PXMP4Q9Y6I8 212 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 WNK2Q9Y3S1 2297 aa4.9□□□□□ -1.62
PROM1-201ENST00000447510 CSPG4Q6UVK1 2322 aa4.9□□□□□ -1.63
PROM1-201ENST00000447510 IGHV2-70DA0A0C4DH43 119 aa4.9□□□□□ -1.63
PROM1-201ENST00000447510 PDCD6O75340 191 aa4.9□□□□□ -1.63
PROM1-201ENST00000447510 RBM11P57052 281 aaKnown RBP4.9□□□□□ -1.63
PROM1-201ENST00000447510 SMAGPQ0VAQ4 97 aa4.9□□□□□ -1.63
PROM1-201ENST00000447510 MRPL52Q86TS9 123 aaKnown RBP4.9□□□□□ -1.63
PROM1-201ENST00000447510 LINC01551Q86U37 167 aa4.9□□□□□ -1.63
PROM1-201ENST00000447510 C1orf147Q96MC9 270 aaPredicted RBP4.9□□□□□ -1.63
PROM1-201ENST00000447510 TMEM222Q9H0R3 208 aa4.9□□□□□ -1.63
PROM1-201ENST00000447510 RAB9BQ9NP90 201 aa4.9□□□□□ -1.63
PROM1-201ENST00000447510 ONECUT1Q9UBC0 465 aa4.9□□□□□ -1.63
PROM1-201ENST00000447510 TRAV30A0A087WSZ9 112 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 M0R1X1 148 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 IGHV4-39P01824 125 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 VDAC1P21796 283 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 BMI1P35226 326 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 ATP5G3P48201 142 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 SLC38A11Q08AI6 406 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 SELENOHQ8IZQ5 122 aaKnown RBP4.89□□□□□ -1.63
PROM1-201ENST00000447510 OR8I2Q8N0Y5 310 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 GCSAMQ8N6F7 178 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 PYGO2Q9BRQ0 406 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 BPESC1Q9GZL8 116 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 BEX4Q9NWD9 120 aaPredicted RBP4.89□□□□□ -1.63
PROM1-201ENST00000447510 IL36RNQ9UBH0 155 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 GNG12Q9UBI6 72 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 TRGV10A0A0A0MS01 117 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 TMEM30CPA0ZSE6 113 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 GAGE10A6NGK3 116 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 OR2H2O95918 312 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 TFF1P04155 84 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 FRMD6-AS1P0C7T7 363 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 C3orf79P0CE67 100 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 PSG2P11465 335 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 SRIP30626 198 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 SPRNQ5BIV9 151 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 SAMD13Q5VXD3 122 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 RNASEKQ6P5S7 137 aaKnown RBP4.89□□□□□ -1.63
PROM1-201ENST00000447510 WDR86Q86TI4 376 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 RPP25LQ8N5L8 163 aaKnown RBP4.89□□□□□ -1.63
PROM1-201ENST00000447510 FAM216BQ8N7L0 139 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 TPRX1Q8N7U7 411 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 STPG3Q8N7X2 389 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 ZNRF1Q8ND25 227 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 CHRDL1Q9BU40 450 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 GNB4Q9HAV0 340 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 ABCA1O95477 2261 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 IGKV1-12A0A0C4DH73 117 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 SRRM5B3KS81 715 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 NDUFS8O00217 210 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 SPINT2O43291 252 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 IGKV1D-12P01611 117 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 LCN2P80188 198 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 HOXA4Q00056 320 aaPredicted RBP4.89□□□□□ -1.63
PROM1-201ENST00000447510 ZNF818PQ6ZRF7 136 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 OR1N2Q8NGR9 330 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 Q96MF0 132 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 GTSF1LQ9H1H1 148 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 FNDC4Q9H6D8 234 aaPredicted RBP4.89□□□□□ -1.63
PROM1-201ENST00000447510 TECRQ9NZ01 308 aaKnown RBP4.89□□□□□ -1.63
PROM1-201ENST00000447510 hADV38S2A0JD32 116 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 SYNGR2O43760 224 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 MT-CO2P00403 227 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 PPBPP02775 128 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 ADH4P08319 380 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 LOXP28300 417 aaPredicted RBP4.89□□□□□ -1.63
PROM1-201ENST00000447510 GATA4P43694 442 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 COMPP49747 757 aaPredicted RBP4.89□□□□□ -1.63
PROM1-201ENST00000447510 RPL31P62899 125 aaKnown RBP4.89□□□□□ -1.63
PROM1-201ENST00000447510 AESQ08117 197 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 ARL16Q0P5N6 197 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 LYPD6Q86Y78 171 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 FAM90A1Q86YD7 464 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 ZNF114Q8NC26 417 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 RFESDQ8TAC1 157 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 SFRP2Q96HF1 295 aa4.89□□□□□ -1.63
PROM1-201ENST00000447510 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.88□□□□□ -1.632e-7■■■■■ 27.8
PROM1-201ENST00000447510 MUC21A0A0G2JKD1 596 aa4.88□□□□□ -1.63
PROM1-201ENST00000447510 MUC21A0A140T8X8 626 aa4.88□□□□□ -1.63
PROM1-201ENST00000447510 RNF223E7ERA6 249 aa4.88□□□□□ -1.63
PROM1-201ENST00000447510 M0R2Z0 102 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms