RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 M0R1B8 84 aa15.55■□□□□ 0.08
SDCBP-204ENST00000447182 GNG10P50151 68 aa15.55■□□□□ 0.08
SDCBP-204ENST00000447182 CD69Q07108 199 aa15.55■□□□□ 0.08
SDCBP-204ENST00000447182 CACNG8Q8WXS5 425 aa15.55■□□□□ 0.08
SDCBP-204ENST00000447182 TMEM68Q96MH6 324 aa15.55■□□□□ 0.08
SDCBP-204ENST00000447182 A0A1W2PS18 150 aa15.54■□□□□ 0.08
SDCBP-204ENST00000447182 PSMB11A5LHX3 300 aa15.54■□□□□ 0.08
SDCBP-204ENST00000447182 OR9G1Q8NH87 305 aa15.54■□□□□ 0.08
SDCBP-204ENST00000447182 COMMD5Q9GZQ3 224 aa15.54■□□□□ 0.08
SDCBP-204ENST00000447182 GCM1Q9NP62 436 aa15.54■□□□□ 0.08
SDCBP-204ENST00000447182 NRN1Q9NPD7 142 aa15.54■□□□□ 0.08
SDCBP-204ENST00000447182 CDC42EP3Q9UKI2 254 aa15.54■□□□□ 0.08
SDCBP-204ENST00000447182 DIRC3C9JPN6 131 aa15.53■□□□□ 0.08
SDCBP-204ENST00000447182 SPINK4O60575 86 aa15.53■□□□□ 0.08
SDCBP-204ENST00000447182 MMP23AO75900 390 aa15.53■□□□□ 0.08
SDCBP-204ENST00000447182 GAGE1Q13065 139 aa15.53■□□□□ 0.08
SDCBP-204ENST00000447182 FAM167A-AS1Q96KT0 104 aa15.53■□□□□ 0.08
SDCBP-204ENST00000447182 CADP27708 2225 aa15.53■□□□□ 0.08
SDCBP-204ENST00000447182 BMPR1BO00238 502 aa15.53■□□□□ 0.08
SDCBP-204ENST00000447182 SAA1P0DJI8 122 aaPredicted RBP15.53■□□□□ 0.08
SDCBP-204ENST00000447182 CTRLP40313 264 aa15.53■□□□□ 0.08
SDCBP-204ENST00000447182 AMTP48728 403 aa15.53■□□□□ 0.08
SDCBP-204ENST00000447182 KRTDAPP60985 99 aa15.53■□□□□ 0.08
SDCBP-204ENST00000447182 ZNF788Q6ZQV5 615 aa15.53■□□□□ 0.08
SDCBP-204ENST00000447182 FAM103A1Q9BTL3 118 aaKnown RBP15.53■□□□□ 0.08
SDCBP-204ENST00000447182 IZUMO1RA6ND01 250 aa15.52■□□□□ 0.08
SDCBP-204ENST00000447182 INS-IGF2F8WCM5 200 aa15.52■□□□□ 0.08
SDCBP-204ENST00000447182 ZNF253O75346 499 aa15.52■□□□□ 0.08
SDCBP-204ENST00000447182 ZNF324O75467 553 aaPredicted RBP15.52■□□□□ 0.08
SDCBP-204ENST00000447182 CASP6P55212 293 aa15.52■□□□□ 0.08
SDCBP-204ENST00000447182 RASL11AQ6T310 242 aa15.52■□□□□ 0.08
SDCBP-204ENST00000447182 ZNF714Q96N38 554 aa15.52■□□□□ 0.08
SDCBP-204ENST00000447182 RCHY1Q96PM5 261 aa15.52■□□□□ 0.08
SDCBP-204ENST00000447182 TMEM208Q9BTX3 173 aa15.52■□□□□ 0.08
SDCBP-204ENST00000447182 DSPP15924 2871 aaKnown RBP15.52■□□□□ 0.07
SDCBP-204ENST00000447182 DLEU1O43261 78 aa15.52■□□□□ 0.07
SDCBP-204ENST00000447182 TCL1AP56279 114 aa15.52■□□□□ 0.07
SDCBP-204ENST00000447182 SRSF6Q13247 344 aaKnown RBP15.52■□□□□ 0.07
SDCBP-204ENST00000447182 MLANAQ16655 118 aa15.52■□□□□ 0.07
SDCBP-204ENST00000447182 KIAA1644Q3SXP7 199 aa15.52■□□□□ 0.07
SDCBP-204ENST00000447182 ZNF833PQ6ZTB9 187 aa15.52■□□□□ 0.07
SDCBP-204ENST00000447182 OSR1Q8TAX0 266 aaPredicted RBP15.52■□□□□ 0.07
SDCBP-204ENST00000447182 WIPF2Q8TF74 440 aaPredicted RBP15.52■□□□□ 0.07
SDCBP-204ENST00000447182 SLC25A2Q9BXI2 301 aa15.52■□□□□ 0.07
SDCBP-204ENST00000447182 NDUFA4L2Q9NRX3 87 aa15.52■□□□□ 0.07
SDCBP-204ENST00000447182 RAI1Q7Z5J4 1906 aaPredicted RBP15.51■□□□□ 0.07
SDCBP-204ENST00000447182 MGST1P10620 155 aaKnown RBP15.51■□□□□ 0.07
SDCBP-204ENST00000447182 SRIP30626 198 aa15.51■□□□□ 0.07
SDCBP-204ENST00000447182 SLC35B1P78383 322 aa15.51■□□□□ 0.07
SDCBP-204ENST00000447182 VHLLQ6RSH7 139 aa15.51■□□□□ 0.07
SDCBP-204ENST00000447182 ZNF474Q6S9Z5 364 aaPredicted RBP15.51■□□□□ 0.07
SDCBP-204ENST00000447182 DLL1O00548 723 aa15.5■□□□□ 0.07
SDCBP-204ENST00000447182 CRYABP02511 175 aaKnown RBP15.5■□□□□ 0.07
SDCBP-204ENST00000447182 TNFAIP6P98066 277 aaPredicted RBP15.5■□□□□ 0.07
SDCBP-204ENST00000447182 ALKBH2Q6NS38 261 aa15.5■□□□□ 0.07
SDCBP-204ENST00000447182 MRPL54Q6P161 138 aaKnown RBP15.5■□□□□ 0.07
SDCBP-204ENST00000447182 FAM231DQ6ZW35 169 aa15.5■□□□□ 0.07
SDCBP-204ENST00000447182 CCL13Q99616 98 aa15.5■□□□□ 0.07
SDCBP-204ENST00000447182 DNAJC4Q9NNZ3 241 aa15.5■□□□□ 0.07
SDCBP-204ENST00000447182 OR10W1Q8NGF6 305 aa15.5■□□□□ 0.07
SDCBP-204ENST00000447182 MRPL27Q9P0M9 148 aaKnown RBP15.5■□□□□ 0.07
SDCBP-204ENST00000447182 IGHV1-46P01743 117 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 APCSP02743 223 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 UBE2L3P68036 154 aaKnown RBP15.49■□□□□ 0.07
SDCBP-204ENST00000447182 FAM216BQ8N7L0 139 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 MBD6Q96DN6 1003 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 LPAR2Q9HBW0 351 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 SERTAD4Q9NUC0 356 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 LINC00312Q9Y6C7 94 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 hADV38S2A0JD32 116 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 PRRX1P54821 245 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 ERHP84090 104 aaKnown RBP15.49■□□□□ 0.07
SDCBP-204ENST00000447182 MORN5Q5VZ52 161 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 TEX36Q5VZQ5 186 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 C19orf35Q6ZS72 473 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 NIT1Q86X76 327 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 DEFB108BQ8NET1 73 aa15.49■□□□□ 0.07
SDCBP-204ENST00000447182 ZNF331Q9NQX6 463 aaPredicted RBP15.49■□□□□ 0.07
SDCBP-204ENST00000447182 PMCHP20382 165 aa15.48■□□□□ 0.07
SDCBP-204ENST00000447182 SELENOVP59797 346 aa15.48■□□□□ 0.07
SDCBP-204ENST00000447182 TSKUQ8WUA8 353 aa15.48■□□□□ 0.07
SDCBP-204ENST00000447182 YLPM1P49750 1951 aaKnown RBP15.47■□□□□ 0.07
SDCBP-204ENST00000447182 TRAV5A0A0B4J249 113 aa15.47■□□□□ 0.07
SDCBP-204ENST00000447182 A6NNC1 897 aa15.47■□□□□ 0.07
SDCBP-204ENST00000447182 M0R296 226 aa15.47■□□□□ 0.07
SDCBP-204ENST00000447182 APOA2P02652 100 aa15.47■□□□□ 0.07
SDCBP-204ENST00000447182 WT1P19544 449 aaPredicted RBP15.47■□□□□ 0.07
SDCBP-204ENST00000447182 USF1P22415 310 aaPredicted RBP15.47■□□□□ 0.07
SDCBP-204ENST00000447182 RPL8P62917 257 aaKnown RBP15.47■□□□□ 0.07
SDCBP-204ENST00000447182 SPATA45Q537H7 98 aa15.47■□□□□ 0.07
SDCBP-204ENST00000447182 TMEM177Q53S58 311 aa15.47■□□□□ 0.07
SDCBP-204ENST00000447182 HARBI1Q96MB7 349 aa15.47■□□□□ 0.07
SDCBP-204ENST00000447182 ZNRD1Q9P1U0 126 aa15.47■□□□□ 0.07
SDCBP-204ENST00000447182 GOLT1BQ9Y3E0 138 aa15.47■□□□□ 0.07
SDCBP-204ENST00000447182 AMMECR1Q9Y4X0 333 aaPredicted RBP15.47■□□□□ 0.07
SDCBP-204ENST00000447182 TNFSF4P23510 183 aa15.47■□□□□ 0.07
SDCBP-204ENST00000447182 OR5AN1Q8NGI8 311 aa15.47■□□□□ 0.07
SDCBP-204ENST00000447182 OR1L4Q8NGR5 311 aa15.47■□□□□ 0.07
SDCBP-204ENST00000447182 OR2T6Q8NHC8 308 aa15.47■□□□□ 0.07
SDCBP-204ENST00000447182 SPENQ96T58 3664 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms