RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 SRD5A2P31213 254 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 GFRA1P56159 465 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 OR5AN1Q8NGI8 311 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 LCTP09848 1927 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 WDR81Q562E7 1941 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 CCL3P10147 92 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 AZU1P20160 251 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 HCP5Q6MZN7 132 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 FAM71F2Q6NXP2 309 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 NHP2Q9NX24 153 aaKnown RBP6.63□□□□□ -1.35
SMG1-202ENST00000446231 MRPL27Q9P0M9 148 aaKnown RBP6.62□□□□□ -1.35
SMG1-202ENST00000446231 RABAC1Q9UI14 185 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 NEUROG1Q92886 237 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 IL11RAQ14626 422 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 DUSP15Q9H1R2 295 aaPredicted RBP6.62□□□□□ -1.35
SMG1-202ENST00000446231 GREB1LQ9C091 1923 aaPredicted RBP6.62□□□□□ -1.35
SMG1-202ENST00000446231 OR11H12B2RN74 326 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 OR11H1Q8NG94 326 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 OR11H2Q8NH07 326 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 RPP25Q9BUL9 199 aaKnown RBP6.62□□□□□ -1.35
SMG1-202ENST00000446231 CHRNA10Q9GZZ6 450 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 PROCRQ9UNN8 238 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 YPEL3P61236 119 aaPredicted RBP6.62□□□□□ -1.35
SMG1-202ENST00000446231 RNF144BQ7Z419 303 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 ZNF319Q9P2F9 582 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 REPIN1Q9BWE0 567 aaKnown RBP6.62□□□□□ -1.35
SMG1-202ENST00000446231 MYO16Q9Y6X6 1858 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 CX3CL1P78423 397 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 ZNF788Q6ZQV5 615 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 GOLT1AQ6ZVE7 132 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 TSSC4Q9Y5U2 329 aaPredicted RBP6.62□□□□□ -1.35
SMG1-202ENST00000446231 IGKV1-5P01602 117 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 LINC00271P0C7V0 271 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 RPL15P61313 204 aaKnown RBP6.62□□□□□ -1.35
SMG1-202ENST00000446231 CACNG7P62955 275 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 Q6ZRM9 215 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 ORMDL3Q8N138 153 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 YPEL1O60688 119 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 MESP2Q0VG99 397 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 SPATA31B1PQ5VZV4 182 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 MOGAT3Q86VF5 341 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 HARBI1Q96MB7 349 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 YPEL2Q96QA6 119 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 SRXN1Q9BYN0 137 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 A0A1W2PRD5 423 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 A0A1W2PRF3 423 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 A0A1W2PRM7 423 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 C9JCJ5 164 aa6.62□□□□□ -1.35
SMG1-202ENST00000446231 HOXA3O43365 443 aaPredicted RBP6.62□□□□□ -1.35
SMG1-202ENST00000446231 ANKRD39Q53RE8 183 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 ZNF479Q96JC4 524 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 PRSS2P07478 247 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 OR52E5Q8NH55 327 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 SSTR5P35346 364 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 PLXND1Q9Y4D7 1925 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 PCDH15Q96QU1 1955 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 TMEM50AO95807 157 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 DLX1P56177 255 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 RPL39P5Q59GN2 51 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 A0A0J9YW62 118 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 KBTBD11-OT1A0A1B0GTJ5 212 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 ZNF146Q15072 292 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 IGHV2-26A0A0B4J1V2 119 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 TRAV24A0A0B4J272 114 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 IGKV1-12A0A0C4DH73 117 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 IGKV1D-12P01611 117 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 COL9A1P20849 921 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 NPIPB3Q92617 1050 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 CITED1Q99966 193 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 LHX8Q68G74 356 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 MEF2CQ06413 473 aaPredicted RBP6.61□□□□□ -1.35
SMG1-202ENST00000446231 PRR31Q5SQ13 230 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 hCG_38984A0A1B0GV85 526 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 NUP35Q8NFH5 326 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 TGFBR3LH3BV60 316 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 PRSS57Q6UWY2 283 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 SLC25A48Q6ZT89 311 aaKnown RBP6.61□□□□□ -1.35
SMG1-202ENST00000446231 ATP5L2Q7Z4Y8 100 aa6.61□□□□□ -1.35
SMG1-202ENST00000446231 PCNX3Q9H6A9 2034 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 IGHV3-21A0A0B4J1V1 117 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 FOXH1O75593 365 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 DPM2O94777 84 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 TTC9CQ8N5M4 171 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 RNF115Q9Y4L5 304 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 TRAV8-2A0A0B4J237 113 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 A6NCN8 305 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 ZNHIT1O43257 154 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 MC5RP33032 325 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 IGKV1-27A0A075B6S5 117 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 GNG5P63218 68 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 PYGO2Q9BRQ0 406 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 SCNM1Q9BWG6 230 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 RBX1P62877 108 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 BTAF1O14981 1849 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 CYSLTR1Q9Y271 337 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 HAPLN4Q86UW8 402 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 ZNF585BQ52M93 769 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 COX6CP09669 75 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 C5orf24Q7Z6I8 188 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 C1QTNF5Q9BXJ0 243 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms