RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TRAV14DV4A0A0A6YYC5 116 aa15.57■□□□□ 0.08
VSX1-206ENST00000444511 PI3P19957 117 aa15.57■□□□□ 0.08
VSX1-206ENST00000444511 TFPI2P48307 235 aa15.57■□□□□ 0.08
VSX1-206ENST00000444511 IZUMO4Q1ZYL8 232 aa15.57■□□□□ 0.08
VSX1-206ENST00000444511 SPINK9Q5DT21 86 aa15.57■□□□□ 0.08
VSX1-206ENST00000444511 APRG1Q8IVJ8 170 aa15.57■□□□□ 0.08
VSX1-206ENST00000444511 RNF183Q96D59 192 aa15.57■□□□□ 0.08
VSX1-206ENST00000444511 KLK11Q9UBX7 282 aa15.57■□□□□ 0.08
VSX1-206ENST00000444511 HYDINQ4G0P3 5121 aa15.57■□□□□ 0.08
VSX1-206ENST00000444511 IGKV3-7A0A075B6H7 116 aa15.56■□□□□ 0.08
VSX1-206ENST00000444511 CD3DP04234 171 aa15.56■□□□□ 0.08
VSX1-206ENST00000444511 SNCAP37840 140 aa15.56■□□□□ 0.08
VSX1-206ENST00000444511 AKR1C2P52895 323 aa15.56■□□□□ 0.08
VSX1-206ENST00000444511 CMC4P56277 68 aaPredicted RBP15.56■□□□□ 0.08
VSX1-206ENST00000444511 PIGPP57054 158 aa15.56■□□□□ 0.08
VSX1-206ENST00000444511 ARRDC1Q8N5I2 433 aa15.56■□□□□ 0.08
VSX1-206ENST00000444511 SLC35G3Q8N808 338 aa15.56■□□□□ 0.08
VSX1-206ENST00000444511 GINS3Q9BRX5 216 aa15.56■□□□□ 0.08
VSX1-206ENST00000444511 MAP6D1Q9H9H5 199 aa15.56■□□□□ 0.08
VSX1-206ENST00000444511 NUPR2A6NF83 97 aa15.55■□□□□ 0.08
VSX1-206ENST00000444511 ATG12O94817 140 aa15.55■□□□□ 0.08
VSX1-206ENST00000444511 IGKV1-5P01602 117 aa15.55■□□□□ 0.08
VSX1-206ENST00000444511 NPBWR1P48145 328 aa15.55■□□□□ 0.08
VSX1-206ENST00000444511 EWSR1Q01844 656 aaKnown RBP eCLIP15.55■□□□□ 0.08
VSX1-206ENST00000444511 LHFPL1Q86WI0 220 aa15.55■□□□□ 0.08
VSX1-206ENST00000444511 OR52I2Q8NH67 350 aa15.55■□□□□ 0.08
VSX1-206ENST00000444511 TP53RKQ96S44 253 aa15.55■□□□□ 0.08
VSX1-206ENST00000444511 EXTL2Q9UBQ6 330 aa15.55■□□□□ 0.08
VSX1-206ENST00000444511 IGHV3OR16-13A0A075B7E8 117 aa15.54■□□□□ 0.08
VSX1-206ENST00000444511 IGHV3-74A0A0B4J1X5 117 aa15.54■□□□□ 0.08
VSX1-206ENST00000444511 IFNA17P01571 189 aa15.54■□□□□ 0.08
VSX1-206ENST00000444511 ZNF182P17025 639 aaPredicted RBP15.54■□□□□ 0.08
VSX1-206ENST00000444511 TBPP20226 339 aa15.54■□□□□ 0.08
VSX1-206ENST00000444511 PPP5CP53041 499 aa15.54■□□□□ 0.08
VSX1-206ENST00000444511 TMEM217Q8N7C4 229 aa15.54■□□□□ 0.08
VSX1-206ENST00000444511 DUSP18Q8NEJ0 188 aa15.54■□□□□ 0.08
VSX1-206ENST00000444511 LINC00476Q8WZB0 136 aa15.54■□□□□ 0.08
VSX1-206ENST00000444511 PDCD10Q9BUL8 212 aa15.54■□□□□ 0.08
VSX1-206ENST00000444511 COPZ2Q9P299 210 aa15.54■□□□□ 0.08
VSX1-206ENST00000444511 A0A0B4J293 547 aa15.53■□□□□ 0.08
VSX1-206ENST00000444511 C3orf85A0A1B0GTC6 90 aa15.53■□□□□ 0.08
VSX1-206ENST00000444511 PAFAH1B2P68402 229 aa15.53■□□□□ 0.08
VSX1-206ENST00000444511 TRIM16LQ309B1 348 aa15.53■□□□□ 0.08
VSX1-206ENST00000444511 TOMM20LQ6UXN7 152 aa15.53■□□□□ 0.08
VSX1-206ENST00000444511 GBGT1Q8N5D6 347 aa15.53■□□□□ 0.08
VSX1-206ENST00000444511 NAA50Q9GZZ1 169 aaKnown RBP15.53■□□□□ 0.08
VSX1-206ENST00000444511 MTFP1Q9UDX5 166 aa15.53■□□□□ 0.08
VSX1-206ENST00000444511 BIRC6Q9NR09 4857 aa15.52■□□□□ 0.08
VSX1-206ENST00000444511 ST8SIA3O43173 380 aa15.52■□□□□ 0.08
VSX1-206ENST00000444511 GABARAPO95166 117 aa15.52■□□□□ 0.08
VSX1-206ENST00000444511 CD5P06127 495 aa15.52■□□□□ 0.08
VSX1-206ENST00000444511 SUB1P53999 127 aaKnown RBP eCLIP15.52■□□□□ 0.08
VSX1-206ENST00000444511 ZNF124Q15973 351 aa15.52■□□□□ 0.08
VSX1-206ENST00000444511 CTF1Q16619 201 aa15.52■□□□□ 0.08
VSX1-206ENST00000444511 FAM90A2PQ658T7 463 aa15.52■□□□□ 0.08
VSX1-206ENST00000444511 TCF24Q7RTU0 167 aa15.52■□□□□ 0.08
VSX1-206ENST00000444511 CCDC71LQ8N9Z2 235 aa15.52■□□□□ 0.08
VSX1-206ENST00000444511 ZFAND1Q8TCF1 268 aa15.52■□□□□ 0.08
VSX1-206ENST00000444511 C15orf40Q8WUR7 153 aa15.52■□□□□ 0.08
VSX1-206ENST00000444511 CSTL1Q9H114 145 aa15.52■□□□□ 0.08
VSX1-206ENST00000444511 PLECQ15149 4684 aaKnown RBP15.52■□□□□ 0.07
VSX1-206ENST00000444511 INS-IGF2F8WCM5 200 aa15.51■□□□□ 0.07
VSX1-206ENST00000444511 CORTO00230 105 aa15.51■□□□□ 0.07
VSX1-206ENST00000444511 LY6G6CO95867 125 aa15.51■□□□□ 0.07
VSX1-206ENST00000444511 P0C879 139 aa15.51■□□□□ 0.07
VSX1-206ENST00000444511 ATF4P18848 351 aaPredicted RBP15.51■□□□□ 0.07
VSX1-206ENST00000444511 HOXA1P49639 335 aaPredicted RBP15.51■□□□□ 0.07
VSX1-206ENST00000444511 SP6Q3SY56 376 aa15.51■□□□□ 0.07
VSX1-206ENST00000444511 SCGB2B2Q4G0G5 96 aa15.51■□□□□ 0.07
VSX1-206ENST00000444511 CEMP1Q6PRD7 247 aaPredicted RBP15.51■□□□□ 0.07
VSX1-206ENST00000444511 ZNF600Q6ZNG1 722 aa15.51■□□□□ 0.07
VSX1-206ENST00000444511 TERB2Q8NHR7 220 aa15.51■□□□□ 0.07
VSX1-206ENST00000444511 RNASE11Q8TAA1 199 aaKnown RBP15.51■□□□□ 0.07
VSX1-206ENST00000444511 RRNAD1Q96FB5 475 aaKnown RBP15.51■□□□□ 0.07
VSX1-206ENST00000444511 ABHD1Q96SE0 405 aa15.51■□□□□ 0.07
VSX1-206ENST00000444511 ENY2Q9NPA8 101 aa15.51■□□□□ 0.07
VSX1-206ENST00000444511 PUS1Q9Y606 427 aaKnown RBP eCLIP15.51■□□□□ 0.07
VSX1-206ENST00000444511 ALMS1Q8TCU4 4167 aa15.5■□□□□ 0.07
VSX1-206ENST00000444511 MPTX1A8MV57 137 aa15.5■□□□□ 0.07
VSX1-206ENST00000444511 ETV6P41212 452 aa15.5■□□□□ 0.07
VSX1-206ENST00000444511 TAS2R19P59542 299 aa15.5■□□□□ 0.07
VSX1-206ENST00000444511 TMEM229BQ8NBD8 167 aa15.5■□□□□ 0.07
VSX1-206ENST00000444511 OR4D10Q8NGI6 311 aa15.5■□□□□ 0.07
VSX1-206ENST00000444511 OR13C8Q8NGS7 320 aa15.5■□□□□ 0.07
VSX1-206ENST00000444511 ST8SIA2Q92186 375 aa15.5■□□□□ 0.07
VSX1-206ENST00000444511 KLK5Q9Y337 293 aaPredicted RBP15.5■□□□□ 0.07
VSX1-206ENST00000444511 DNASE2O00115 360 aaPredicted RBP15.49■□□□□ 0.07
VSX1-206ENST00000444511 RAB3DO95716 219 aa15.49■□□□□ 0.07
VSX1-206ENST00000444511 TMEM50AO95807 157 aa15.49■□□□□ 0.07
VSX1-206ENST00000444511 RNASE2P10153 161 aaKnown RBP15.49■□□□□ 0.07
VSX1-206ENST00000444511 RPL11P62913 178 aaKnown RBP15.49■□□□□ 0.07
VSX1-206ENST00000444511 GPR107Q5VW38 600 aa15.49■□□□□ 0.07
VSX1-206ENST00000444511 VSIRQ9H7M9 311 aa15.49■□□□□ 0.07
VSX1-206ENST00000444511 ZFAND3Q9H8U3 227 aa15.49■□□□□ 0.07
VSX1-206ENST00000444511 IGHV3-66A0A0C4DH42 116 aa15.48■□□□□ 0.07
VSX1-206ENST00000444511 B3GALNT1O75752 331 aa15.48■□□□□ 0.07
VSX1-206ENST00000444511 APOHP02749 345 aaPredicted RBP15.48■□□□□ 0.07
VSX1-206ENST00000444511 CD74P04233 296 aa15.48■□□□□ 0.07
VSX1-206ENST00000444511 SMIM18P0DKX4 95 aa15.48■□□□□ 0.07
VSX1-206ENST00000444511 UCP1P25874 307 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms