RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 NUDT15Q9NV35 164 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 SORL1Q92673 2214 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 TRAV6A0A075B6T7 132 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 DUXBA0A1W2PPF3 345 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 DUS4LO95620 317 aaKnown RBP9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 IFNA17P01571 189 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 CSN3P07498 182 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 ZP3P21754 424 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 GPR183P32249 361 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 HOXA1P49639 335 aaPredicted RBP9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 SRPXP78539 464 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 TNFRSF9Q07011 255 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 MLANAQ16655 118 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 C9orf66Q5T8R8 295 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 UNQ9165/PRO28630Q6UXU0 137 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 VN1R17PQ8TDU5 208 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 EEF1AKMT3Q96AZ1 226 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 RBKSQ9H477 322 aa9.77□□□□□ -0.85
PDLIM2-212ENST00000443561 TRBV7-1A0A0A6YYK4 115 aa9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 IGHV3-35A0A0C4DH35 117 aa9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 A0A1B0GU03 582 aa9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 CENPXA8MT69 81 aa9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 DHFRP00374 187 aa9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 MT-CO2P00403 227 aa9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 CLEC3BP05452 202 aa9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 HOXB5P09067 269 aa9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 ANXA3P12429 323 aa9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 SPNP16150 400 aa9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 ARL3P36405 182 aa9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 OR9G4Q8NGQ1 327 aa9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 MISP3Q96FF7 219 aa9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 MCRIP2Q9BUT9 160 aaKnown RBP9.76□□□□□ -0.85
PDLIM2-212ENST00000443561 TMEM213A2RRL7 107 aa9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 OR2T8A6NH00 312 aa9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 CTSGP08311 255 aa9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 SLC25A6P12236 298 aa9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 FCGR2BP31994 310 aaPredicted RBP9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 RPEL1Q2QD12 228 aa9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 REC114Q7Z4M0 266 aa9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 NRARPQ7Z6K4 114 aa9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 OR4D5Q8NGN0 318 aa9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 MITD1Q8WV92 249 aa9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 CACNG8Q8WXS5 425 aa9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 CXorf58Q96LI9 332 aa9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 ZNF436Q9C0F3 470 aaPredicted RBP9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 C21orf62Q9NYP8 219 aa9.75□□□□□ -0.85
PDLIM2-212ENST00000443561 IZUMO1RA6ND01 250 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 C15orf62A8K5M9 175 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 A8MWP6 167 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 CCSO14618 274 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 TGOLN2O43493 480 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 GGCTO75223 188 aaKnown RBP9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 SAP30O75446 220 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 IGLV1-51P01701 117 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 H2AFB2P0C5Z0 115 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 ERHP84090 104 aaKnown RBP9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 C2orf83Q53S99 150 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 GPHB5Q86YW7 130 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 DUSP18Q8NEJ0 188 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 OR10C1Q96KK4 312 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 PRR25Q96S07 402 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 TMED3Q9Y3Q3 217 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 SELENOKQ9Y6D0 94 aa9.74□□□□□ -0.85
PDLIM2-212ENST00000443561 C2orf70A6NJV1 201 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 CEBPZOSA8MTT3 80 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 PRSS46E5RG02 174 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 LGALS9O00182 355 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 TMEM50AO95807 157 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 IAPPP10997 89 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 C4orf46Q504U0 113 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 FAM209BQ5JX69 171 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 SLC24A4Q8NFF2 622 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 OR1L6Q8NGR2 347 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 OR1S1Q8NH92 325 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 DTD1Q8TEA8 209 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 PINX1Q96BK5 328 aaKnown RBP9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 OR4C12Q96R67 309 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 PDCD10Q9BUL8 212 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 THYN1Q9P016 225 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 DNAH9Q9NYC9 4486 aa9.73□□□□□ -0.85
PDLIM2-212ENST00000443561 IGHV3OR16-8A0A075B7F1 116 aa9.72□□□□□ -0.85
PDLIM2-212ENST00000443561 FAM240BA0A1B0GVZ2 78 aa9.72□□□□□ -0.85
PDLIM2-212ENST00000443561 NPY1RP25929 384 aa9.72□□□□□ -0.85
PDLIM2-212ENST00000443561 ID3Q02535 119 aa9.72□□□□□ -0.85
PDLIM2-212ENST00000443561 ZNF431Q8TF32 576 aaPredicted RBP9.72□□□□□ -0.85
PDLIM2-212ENST00000443561 TMEM190Q8WZ59 177 aa9.72□□□□□ -0.85
PDLIM2-212ENST00000443561 BSCL2Q96G97 398 aaPredicted RBP9.72□□□□□ -0.85
PDLIM2-212ENST00000443561 ATP6V0BQ99437 205 aa9.72□□□□□ -0.85
PDLIM2-212ENST00000443561 MAGT1Q9H0U3 335 aa9.72□□□□□ -0.85
PDLIM2-212ENST00000443561 SIGLEC8Q9NYZ4 499 aa9.72□□□□□ -0.85
PDLIM2-212ENST00000443561 IL5P05113 134 aa9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 SNCAP37840 140 aa9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 HTR2BP41595 481 aa9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 INSL3P51460 131 aa9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 PAX9P55771 341 aa9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 TM4SF20Q53R12 229 aa9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 PLET1Q6UQ28 207 aa9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 ZBTB8BQ8NAP8 495 aaPredicted RBP9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 UBAC2Q8NBM4 344 aa9.71□□□□□ -0.86
PDLIM2-212ENST00000443561 COQ8AQ8NI60 647 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms